FFCP PHASE1:Hg19::chr10:3930378..3930397,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3930378..3930397,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:3930378..3930397,+ | |description=CAGE_peak_at_chr10:3930378..3930397,+ | ||
|id=chr10:3930378..3930397,+ | |id=chr10:3930378..3930397,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.73e-56!42;CL:0000860!2.77e-51!45;CL:0000738!6.44e-42!140;CL:0000766!2.63e-37!76;CL:0000557!9.76e-37!71;CL:0002009!6.43e-35!65;CL:0000839!2.35e-33!70;CL:0002194!3.37e-32!63;CL:0000576!3.37e-32!63;CL:0000040!3.37e-32!63;CL:0000559!3.37e-32!63;CL:0002031!2.37e-30!124;CL:0000037!2.39e-30!172;CL:0000566!2.39e-30!172;CL:0000988!9.98e-30!182;CL:0002087!2.41e-29!119;CL:0000763!2.29e-27!112;CL:0000049!2.29e-27!112;CL:0002032!2.74e-26!165;CL:0000837!2.74e-26!165;CL:0000134!1.61e-14!358;CL:0002320!8.17e-14!365;CL:0000219!2.33e-11!390;CL:0000063!6.93e-11!578;CL:0000034!1.87e-10!444;CL:0000048!2.17e-10!430;CL:0000723!6.05e-10!436;CL:0000453!4.91e-09!5;CL:0000144!5.16e-09!625;CL:0002371!5.96e-09!591;CL:0002393!7.50e-09!9;CL:0002397!7.50e-09!9;CL:0000012!8.31e-08!682;CL:0000451!5.67e-07!10;CL:0000548!6.88e-07!679;CL:0000004!6.88e-07!679;CL:0000255!6.88e-07!679;CL:0000003!8.78e-07!722 | |ontology_enrichment_celltype=CL:0002057!6.73e-56!42;CL:0000860!2.77e-51!45;CL:0000738!6.44e-42!140;CL:0000766!2.63e-37!76;CL:0000557!9.76e-37!71;CL:0002009!6.43e-35!65;CL:0000839!2.35e-33!70;CL:0002194!3.37e-32!63;CL:0000576!3.37e-32!63;CL:0000040!3.37e-32!63;CL:0000559!3.37e-32!63;CL:0002031!2.37e-30!124;CL:0000037!2.39e-30!172;CL:0000566!2.39e-30!172;CL:0000988!9.98e-30!182;CL:0002087!2.41e-29!119;CL:0000763!2.29e-27!112;CL:0000049!2.29e-27!112;CL:0002032!2.74e-26!165;CL:0000837!2.74e-26!165;CL:0000134!1.61e-14!358;CL:0002320!8.17e-14!365;CL:0000219!2.33e-11!390;CL:0000063!6.93e-11!578;CL:0000034!1.87e-10!444;CL:0000048!2.17e-10!430;CL:0000723!6.05e-10!436;CL:0000453!4.91e-09!5;CL:0000144!5.16e-09!625;CL:0002371!5.96e-09!591;CL:0002393!7.50e-09!9;CL:0002397!7.50e-09!9;CL:0000012!8.31e-08!682;CL:0000451!5.67e-07!10;CL:0000548!6.88e-07!679;CL:0000004!6.88e-07!679;CL:0000255!6.88e-07!679;CL:0000003!8.78e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.28e-75;33!CL:0002057;8.28e-75;33!CL:0000473;1.21e-50;39!CL:0000234;1.21e-50;39!CL:0000576;1.46e-40;48!CL:0000766;1.47e-31;69!CL:0002087;7.87e-17;104!CL:0000763;1.30e-13;100!CL:0000623;1.06e-11;3!CL:0000738;2.88e-11;136!CL:0000767;3.59e-11;3!CL:0000988;4.57e-08;177!CL:0001014;5.74e-08;2!CL:0001016;5.74e-08;2!CL:0000094;4.39e-07;8!CL:0000791;7.99e-07;18!CL:0000789;7.99e-07;18!CL:0002419;7.99e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-76,42;CL:0002057,1.32e-76,42;CL:0000473,5.11e-66,48;CL:0000234,5.11e-66,48;CL:0000766,6.93e-63,72;CL:0000738,3.40e-61,136;CL:0000557,7.88e-61,67;CL:0002009,2.39e-56,61;CL:0000839,1.06e-54,66;CL:0002031,3.33e-51,120;CL:0002194,3.39e-51,59;CL:0000576,3.39e-51,59;CL:0000040,3.39e-51,59;CL:0000559,3.39e-51,59;CL:0000037,1.60e-47,168;CL:0000763,2.78e-46,108;CL:0000049,2.78e-46,108;CL:0002087,2.90e-46,115;CL:0002032,1.33e-45,161;CL:0000837,1.33e-45,161;CL:0000988,1.46e-44,177;CL:0000134,9.80e-18,354;CL:0002320,3.58e-17,361;CL:0000219,3.43e-15,386;CL:0000034,1.22e-13,441;CL:0000048,9.14e-13,427;CL:0000723,1.98e-12,433;CL:0000623,1.14e-11,3;CL:0000825,1.14e-11,3;CL:0000767,3.01e-11,3;CL:0001014,4.64e-08,2;CL:0001016,4.64e-08,2;CL:0000094,3.97e-07,8;CL:0000791,7.86e-07,18;CL:0000789,7.86e-07,18;CL:0002420,7.86e-07,18;CL:0002419,7.86e-07,18;CL:0000790,7.86e-07,18;CL:0000453,9.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;9.41e-57;42!CL:0000049;5.41e-11;108!CL:0000790;7.99e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.24e-32!80;UBERON:0002390!9.57e-30!102;UBERON:0003061!9.57e-30!102;UBERON:0001474!2.16e-29!86;UBERON:0002193!5.27e-27!112;UBERON:0004765!3.44e-24!101;UBERON:0001434!3.44e-24!101;UBERON:0002405!7.20e-22!115;UBERON:0003081!5.29e-20!216;UBERON:0002384!7.38e-13!375;UBERON:0002204!1.63e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.16e-52,76;UBERON:0001474,3.36e-48,82;UBERON:0002390,5.06e-44,98;UBERON:0003061,5.06e-44,98;UBERON:0004765,3.61e-43,90;UBERON:0002405,1.67e-41,93;UBERON:0002193,4.01e-39,108;UBERON:0001434,5.31e-38,100;UBERON:0002204,2.73e-19,167;UBERON:0003081,6.95e-19,203;UBERON:0002384,2.10e-16,371;UBERON:0000926,6.82e-09,315;UBERON:0004120,6.82e-09,315;UBERON:0006603,6.82e-09,315 | |||
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|short_description=p@chr10:3930378..3930397,+ | |short_description=p@chr10:3930378..3930397,+ | ||
}} | }} |
Latest revision as of 13:38, 23 July 2015
Short description: | p@chr10:3930378..3930397, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3930378..3930397, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.16e-52 | 76 |
bone element | 3.36e-48 | 82 |
hematopoietic system | 5.06e-44 | 98 |
blood island | 5.06e-44 | 98 |
skeletal element | 3.61e-43 | 90 |
immune system | 1.67e-41 | 93 |
hemolymphoid system | 4.01e-39 | 108 |
skeletal system | 5.31e-38 | 100 |
musculoskeletal system | 2.73e-19 | 167 |
lateral plate mesoderm | 6.95e-19 | 203 |
connective tissue | 2.10e-16 | 371 |
mesoderm | 6.82e-09 | 315 |
mesoderm-derived structure | 6.82e-09 | 315 |
presumptive mesoderm | 6.82e-09 | 315 |