FFCP PHASE1:Hg19::chr10:3893865..3893880,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3893865..3893880,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:3893865..3893880,- | |description=CAGE_peak_at_chr10:3893865..3893880,- | ||
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|ontology_enrichment_celltype_v019=CL:0000860;4.35e-47;33!CL:0002057;4.35e-47;33!CL:0000473;1.99e-32;39!CL:0000234;1.99e-32;39!CL:0000576;3.90e-28;48!CL:0000766;2.94e-19;69!CL:0000767;7.64e-15;3!CL:0002087;4.05e-11;104!CL:0000317;1.80e-10;2!CL:1000448;1.80e-10;2!CL:0002308;1.80e-10;2!CL:0002140;1.80e-10;2!CL:0000763;2.64e-09;100!CL:0002393;3.78e-08;6!CL:0002397;3.78e-08;6!CL:0000623;1.96e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;4.35e-47;33!CL:0002057;4.35e-47;33!CL:0000473;1.99e-32;39!CL:0000234;1.99e-32;39!CL:0000576;3.90e-28;48!CL:0000766;2.94e-19;69!CL:0000767;7.64e-15;3!CL:0002087;4.05e-11;104!CL:0000317;1.80e-10;2!CL:1000448;1.80e-10;2!CL:0002308;1.80e-10;2!CL:0002140;1.80e-10;2!CL:0000763;2.64e-09;100!CL:0002393;3.78e-08;6!CL:0002397;3.78e-08;6!CL:0000623;1.96e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.55e-53,42;CL:0002057,1.55e-53,42;CL:0000473,3.32e-46,48;CL:0000234,3.32e-46,48;CL:0000766,1.43e-37,72;CL:0002194,6.15e-36,59;CL:0000576,6.15e-36,59;CL:0000040,6.15e-36,59;CL:0000559,6.15e-36,59;CL:0002009,1.30e-34,61;CL:0000839,1.20e-31,66;CL:0000557,4.17e-31,67;CL:0000763,2.83e-23,108;CL:0000049,2.83e-23,108;CL:0000738,1.35e-22,136;CL:0002087,1.43e-21,115;CL:0002031,1.92e-20,120;CL:0002032,3.79e-18,161;CL:0000837,3.79e-18,161;CL:0000037,3.87e-17,168;CL:0000988,5.86e-16,177;CL:0000767,4.38e-15,3;CL:0000317,2.80e-10,2;CL:1000448,2.80e-10,2;CL:0002308,2.80e-10,2;CL:0002140,2.80e-10,2;CL:0000623,1.64e-07,3;CL:0000825,1.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.51e-37;42 | |ontology_enrichment_development_v019=CL:0002057;5.51e-37;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002419;1.80e-10;2!UBERON:0007771;1.80e-10;2!UBERON:0003297;1.80e-10;2!UBERON:0001821;1.80e-10;2!UBERON:0003487;1.80e-10;2!UBERON:0001820;1.80e-10;2 | |ontology_enrichment_uberon_v019=UBERON:0002419;1.80e-10;2!UBERON:0007771;1.80e-10;2!UBERON:0003297;1.80e-10;2!UBERON:0001821;1.80e-10;2!UBERON:0003487;1.80e-10;2!UBERON:0001820;1.80e-10;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.16e-27,76;UBERON:0001474,1.47e-24,82;UBERON:0004765,3.27e-24,90;UBERON:0001434,2.74e-21,100;UBERON:0002405,4.34e-21,93;UBERON:0002390,9.12e-20,98;UBERON:0003061,9.12e-20,98;UBERON:0002193,1.73e-17,108;UBERON:0002204,1.02e-10,167;UBERON:0002419,2.80e-10,2;UBERON:0007771,2.80e-10,2;UBERON:0003297,2.80e-10,2;UBERON:0001821,2.80e-10,2;UBERON:0003487,2.80e-10,2;UBERON:0001820,2.80e-10,2;UBERON:0005089,2.80e-10,2;UBERON:0005088,2.80e-10,2;UBERON:0003081,8.19e-10,203 | |||
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|short_description=p@chr10:3893865..3893880,- | |short_description=p@chr10:3893865..3893880,- | ||
}} | }} |
Latest revision as of 13:37, 23 July 2015
Short description: | p@chr10:3893865..3893880, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3893865..3893880, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.55e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-53 | 42 |
defensive cell | 3.32e-46 | 48 |
phagocyte | 3.32e-46 | 48 |
myeloid leukocyte | 1.43e-37 | 72 |
monopoietic cell | 6.15e-36 | 59 |
monocyte | 6.15e-36 | 59 |
monoblast | 6.15e-36 | 59 |
promonocyte | 6.15e-36 | 59 |
macrophage dendritic cell progenitor | 1.30e-34 | 61 |
myeloid lineage restricted progenitor cell | 1.20e-31 | 66 |
granulocyte monocyte progenitor cell | 4.17e-31 | 67 |
myeloid cell | 2.83e-23 | 108 |
common myeloid progenitor | 2.83e-23 | 108 |
leukocyte | 1.35e-22 | 136 |
nongranular leukocyte | 1.43e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 1.92e-20 | 120 |
hematopoietic oligopotent progenitor cell | 3.79e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.79e-18 | 161 |
hematopoietic stem cell | 3.87e-17 | 168 |
hematopoietic cell | 5.86e-16 | 177 |
basophil | 4.38e-15 | 3 |
sebum secreting cell | 2.80e-10 | 2 |
epithelial cell of sweat gland | 2.80e-10 | 2 |
epithelial cell of skin gland | 2.80e-10 | 2 |
acinar cell of sebaceous gland | 2.80e-10 | 2 |
natural killer cell | 1.64e-07 | 3 |
pro-NK cell | 1.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.16e-27 | 76 |
bone element | 1.47e-24 | 82 |
skeletal element | 3.27e-24 | 90 |
skeletal system | 2.74e-21 | 100 |
immune system | 4.34e-21 | 93 |
hematopoietic system | 9.12e-20 | 98 |
blood island | 9.12e-20 | 98 |
hemolymphoid system | 1.73e-17 | 108 |
musculoskeletal system | 1.02e-10 | 167 |
skin gland | 2.80e-10 | 2 |
epidermis gland | 2.80e-10 | 2 |
gland of integumental system | 2.80e-10 | 2 |
sebaceous gland | 2.80e-10 | 2 |
skin sebaceous gland | 2.80e-10 | 2 |
sweat gland | 2.80e-10 | 2 |
sweat gland placode | 2.80e-10 | 2 |
sebaceous gland placode | 2.80e-10 | 2 |
lateral plate mesoderm | 8.19e-10 | 203 |