FFCP PHASE1:Hg19::chr10:37555522..37555528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:37555522..37555528,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr10:37555522..37555528,+ | |description=CAGE_peak_at_chr10:37555522..37555528,+ | ||
|id=chr10:37555522..37555528,+ | |id=chr10:37555522..37555528,+ | ||
|ontology_enrichment_celltype=CL:0000054!5.49e-09!2;CL:0000137!5.49e-09!2;CL:0000092!5.49e-09!2;CL:1000415!8.74e-09!2 | |ontology_enrichment_celltype=CL:0000054!5.49e-09!2;CL:0000137!5.49e-09!2;CL:0000092!5.49e-09!2;CL:1000415!8.74e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0005425;3.34e-66;1!UBERON:0003056;3.66e-23;3 | |||
|ontology_enrichment_disease=DOID:0060085!1.21e-16!1;DOID:3165!1.21e-16!1;DOID:0060121!1.21e-16!1;DOID:2438!1.21e-16!1;DOID:4418!1.21e-16!1;DOID:5093!1.42e-16!4;DOID:1612!1.42e-16!4;DOID:200!5.49e-09!2;DOID:4305!5.49e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0000941!6.47e-17!1;UBERON:0004904!6.47e-17!1;UBERON:0002464!6.47e-17!1;UBERON:0001021!6.47e-17!1;UBERON:0001785!6.47e-17!1;UBERON:0003714!4.02e-09!2;UBERON:0005162!4.02e-09!2;UBERON:0000122!4.02e-09!2;UBERON:0001255!7.49e-09!2;UBERON:0001556!7.49e-09!2;UBERON:0000310!3.54e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.34e-66;1!UBERON:0001785;3.34e-66;1!UBERON:0002464;3.34e-66;1!UBERON:0004904;3.34e-66;1!UBERON:0001021;3.34e-66;1!UBERON:0003714;5.96e-34;2!UBERON:0005162;5.96e-34;2!UBERON:0000122;5.96e-34;2!UBERON:0001911;7.35e-18;4!UBERON:0000010;1.16e-08;8!UBERON:0000310;5.73e-08;10!UBERON:0001443;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.66e-66,1;UBERON:0001785,4.66e-66,1;UBERON:0002464,4.66e-66,1;UBERON:0004904,4.66e-66,1;UBERON:0001021,4.66e-66,1;UBERON:0003902,4.66e-66,1;UBERON:0005425,4.66e-66,1;UBERON:0003714,7.05e-34,2;UBERON:0005162,7.05e-34,2;UBERON:0000122,7.05e-34,2;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0001781,1.03e-17,4;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0005085,1.20e-09,31;UBERON:0000076,1.24e-09,8;UBERON:0000010,1.21e-08,8;UBERON:0000310,5.73e-08,10;UBERON:0001443,2.32e-07,11 | |||
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|short_description=p@chr10:37555522..37555528,+ | |short_description=p@chr10:37555522..37555528,+ | ||
}} | }} |
Latest revision as of 13:28, 23 July 2015
Short description: | p@chr10:37555522..37555528, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:37555522..37555528, + |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.66e-66 | 1 |
cranial nerve | 4.66e-66 | 1 |
nerve trunk | 4.66e-66 | 1 |
nerve connecting eye with brain | 4.66e-66 | 1 |
nerve | 4.66e-66 | 1 |
retinal neural layer | 4.66e-66 | 1 |
presumptive neural retina | 4.66e-66 | 1 |
neural tissue | 7.05e-34 | 2 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
layer of retina | 1.03e-17 | 4 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
ectodermal placode | 1.20e-09 | 31 |
external ectoderm | 1.24e-09 | 8 |
peripheral nervous system | 1.21e-08 | 8 |
breast | 5.73e-08 | 10 |
chest | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |