FFCP PHASE1:Hg19::chr10:3668321..3668343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3668321..3668343,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr10:3668321..3668343,- | |description=CAGE_peak_at_chr10:3668321..3668343,- | ||
Latest revision as of 13:28, 23 July 2015
| Short description: | p@chr10:3668321..3668343, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr10:3668321..3668343, - |
| Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr10:3668321..3668343- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic cell | 5.90e-31 | 19 |
| outer root sheath cell | 5.02e-16 | 2 |
| amniotic epithelial cell | 1.06e-15 | 2 |
| amnion mesenchymal stem cell | 1.30e-14 | 5 |
| chorionic membrane mesenchymal stem cell | 2.29e-11 | 3 |
| placental epithelial cell | 6.95e-11 | 3 |
| mucus secreting cell | 1.13e-08 | 1 |
| hair follicle cell | 6.27e-07 | 5 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 2.80e-52 | 14 |
| membranous layer | 2.80e-52 | 14 |
| extraembryonic structure | 7.61e-30 | 24 |
| amnion | 5.08e-27 | 7 |
| chorion | 7.39e-27 | 7 |
| somatic layer of lateral plate mesoderm | 1.24e-23 | 8 |
| placenta | 2.72e-17 | 4 |
| allantois | 2.72e-17 | 4 |
| hair root sheath | 5.02e-16 | 2 |
| hair outer root sheath | 5.02e-16 | 2 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| papillary adenocarcinoma | 4.19e-09 | 1 |
| mucinous adenocarcinoma | 1.13e-08 | 1 |
Showing 1 to 2 of 2 entries
