FFCP PHASE1:Hg19::chr10:30347808..30347830,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30347808..30347830,+ | |||
|description=CAGE_peak_at_chr10:30347808..30347830,+ | |description=CAGE_peak_at_chr10:30347808..30347830,+ | ||
|id=chr10:30347808..30347830,+ | |id=chr10:30347808..30347830,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002568;1.72e-14;1!CL:0002569;1.01e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,1.84e-14,1;CL:0002569,1.15e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.41e-28;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.17e-16!41;UBERON:0001890!3.17e-16!41;UBERON:0006240!3.17e-16!41;UBERON:0003080!1.19e-15!42;UBERON:0001869!1.60e-15!32;UBERON:0007023!4.48e-15!115;UBERON:0001893!3.15e-14!34;UBERON:0002020!3.93e-14!34;UBERON:0003528!3.93e-14!34;UBERON:0003056!4.35e-14!61;UBERON:0002791!2.63e-13!33;UBERON:0002346!6.45e-12!90;UBERON:0001049!2.78e-11!57;UBERON:0005068!2.78e-11!57;UBERON:0006241!2.78e-11!57;UBERON:0007135!2.78e-11!57;UBERON:0000955!3.75e-11!69;UBERON:0006238!3.75e-11!69;UBERON:0002616!1.25e-10!59;UBERON:0002420!1.38e-10!9;UBERON:0007245!1.38e-10!9;UBERON:0010009!1.38e-10!9;UBERON:0010011!1.38e-10!9;UBERON:0000454!1.38e-10!9;UBERON:0003075!3.05e-10!86;UBERON:0007284!3.05e-10!86;UBERON:0002619!4.28e-10!22;UBERON:0001950!4.69e-10!20;UBERON:0005743!1.58e-09!86;UBERON:0001017!1.67e-09!82;UBERON:0000073!3.72e-09!94;UBERON:0001016!3.72e-09!94;UBERON:0000956!1.90e-08!25;UBERON:0000203!1.90e-08!25;UBERON:0009663!4.26e-08!7;UBERON:0000153!5.62e-08!129;UBERON:0007811!5.62e-08!129;UBERON:0002308!7.22e-08!9;UBERON:0000125!7.22e-08!9;UBERON:0001871!1.10e-07!7;UBERON:0000369!1.88e-07!4;UBERON:0002435!1.88e-07!4;UBERON:0000204!1.88e-07!4;UBERON:0010082!1.88e-07!4;UBERON:0000033!3.23e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;2.71e-53;4!UBERON:0002435;2.71e-53;4!UBERON:0000204;2.71e-53;4!UBERON:0005383;1.22e-40;3!UBERON:0005382;1.22e-40;3!UBERON:0009663;1.13e-30;7!UBERON:0001873;5.41e-28;2!UBERON:0002420;5.94e-24;9!UBERON:0000125;5.94e-24;9!UBERON:0007245;5.94e-24;9!UBERON:0002308;5.94e-24;9!UBERON:0010009;5.94e-24;9!UBERON:0010011;5.94e-24;9!UBERON:0000454;5.94e-24;9!UBERON:0001882;1.72e-14;1!UBERON:0001874;1.72e-14;1!UBERON:0005403;1.72e-14;1!UBERON:0002791;2.97e-14;32!UBERON:0001869;2.97e-14;32!UBERON:0001893;8.62e-14;34!UBERON:0003528;2.46e-13;34!UBERON:0002020;2.46e-13;34!UBERON:0002331;1.41e-12;10!UBERON:0003422;1.01e-09;6!UBERON:0002780;1.83e-09;41!UBERON:0001890;1.83e-09;41!UBERON:0003104;1.85e-08;7!UBERON:0009142;1.85e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.37e-53,4;UBERON:0002435,2.37e-53,4;UBERON:0000204,2.37e-53,4;UBERON:0010082,2.37e-53,4;UBERON:0005383,8.70e-41,3;UBERON:0005382,8.70e-41,3;UBERON:0009663,1.05e-30,7;UBERON:0001873,6.20e-28,2;UBERON:0010122,6.20e-28,2;UBERON:0002420,5.61e-24,9;UBERON:0000125,5.61e-24,9;UBERON:0007245,5.61e-24,9;UBERON:0002308,5.61e-24,9;UBERON:0010009,5.61e-24,9;UBERON:0010011,5.61e-24,9;UBERON:0000454,5.61e-24,9;UBERON:0001874,1.07e-14,1;UBERON:0001882,2.11e-14,1;UBERON:0005403,2.11e-14,1;UBERON:0002791,3.18e-14,32;UBERON:0001869,3.18e-14,32;UBERON:0003528,2.14e-13,34;UBERON:0002020,2.14e-13,34;UBERON:0001893,2.14e-13,34;UBERON:0002331,1.55e-12,10;UBERON:0000358,1.55e-12,10;UBERON:0000307,1.55e-12,10;UBERON:0000091,1.55e-12,10;UBERON:0000087,1.55e-12,10;UBERON:0007010,1.55e-12,10;UBERON:0007806,1.55e-12,10;UBERON:0008780,1.55e-12,10;UBERON:0005728,1.55e-12,10;UBERON:0002780,4.08e-11,41;UBERON:0001890,4.08e-11,41;UBERON:0003080,4.08e-11,41;UBERON:0006240,4.08e-11,41;UBERON:0003056,5.14e-10,61;UBERON:0003422,1.15e-09,6;UBERON:0002346,4.52e-09,86;UBERON:0000073,1.42e-08,53;UBERON:0002616,1.42e-08,53;UBERON:0001049,4.19e-08,56;UBERON:0005068,4.19e-08,56;UBERON:0006241,4.19e-08,56;UBERON:0007135,4.19e-08,56;UBERON:0003075,2.48e-07,82;UBERON:0007284,2.48e-07,82 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.649094787309367,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.772921620136887,0.37223371266318,0.675105328965065,0.292311015483596,0,0.368199594569197,0.646584227275248,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,1.16344544182,0,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.61384789315225,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0.196498082026242,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0.994147647766298,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0,3.54296554325536,2.17073589525734,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,3.55825354416746,0.988511511572023,0.939797545549098,0,0,0.468528891450678,0,0,0,0.789168805698781,0,0.30607276163049,0.505492637027904,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,1.80784592624426,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0.77380195455795,0.364497339948148,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.1251909307065,0,0,0,0.553394539744923,0,0,0,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0.554805861502613,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0.53168342911599,1.04349012362347,0.150257608997218,0,0,0,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.509197589862076,0.212574920101683,2.47871528518004,0,0.318004350653419,0,0,0,0,1.15612605173627,1.41696576325585,0,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,1.56215619722769,0,0.317079050969534,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.460409414939944,0.118193840883968,0,0.156986185701028,1.72827148907602,0,0,0,0.47775168788705,8.07684949196217,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.439762066981716,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0.432626562123789,0,0.109265571963696,0.506794004045748,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.724030971033267,0.213233981900981,0.23806443146374,0,0.186224142887574,0,0,0,0.435433495793923,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0.977931553462932,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.649094787309367,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.772921620136887,0.37223371266318,0.675105328965065,0.292311015483596,0,0.368199594569197,0.646584227275248,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,1.16344544182,0,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.61384789315225,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0.196498082026242,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0.994147647766298,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0,3.54296554325536,2.17073589525734,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,3.55825354416746,0.988511511572023,0.939797545549098,0,0,0.468528891450678,0,0,0,0.789168805698781,0,0.30607276163049,0.505492637027904,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,1.80784592624426,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0.77380195455795,0.364497339948148,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.1251909307065,0,0,0,0.553394539744923,0,0,0,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0.554805861502613,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0.53168342911599,1.04349012362347,0.150257608997218,0,0,0,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.509197589862076,0.212574920101683,2.47871528518004,0,0.318004350653419,0,0,0,0,1.15612605173627,1.41696576325585,0,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,1.56215619722769,0,0.317079050969534,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.460409414939944,0.118193840883968,0,0.156986185701028,1.72827148907602,0,0,0,0.47775168788705,8.07684949196217,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.439762066981716,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0.432626562123789,0,0.109265571963696,0.506794004045748,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.724030971033267,0.213233981900981,0.23806443146374,0,0.186224142887574,0,0,0,0.435433495793923,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0.977931553462932,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:30347808..30347830,+ | |short_description=p@chr10:30347808..30347830,+ | ||
}} | }} |
Latest revision as of 13:05, 23 July 2015
Short description: | p@chr10:30347808..30347830, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30347808..30347830, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 1.84e-14 | 1 |
mesenchymal stem cell of umbilical cord | 1.15e-09 | 6 |