FFCP PHASE1:Hg19::chr10:29431689..29431695,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:29431689..29431695,+ | |||
|description=CAGE_peak_at_chr10:29431689..29431695,+ | |||
|id=chr10:29431689..29431695,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.77e-17!7;CL:0000586!2.77e-17!7;CL:0002322!6.38e-17!5;CL:0002541!7.01e-16!3;CL:0002536!8.65e-11!2;CL:0000148!1.61e-08!10;CL:0000541!1.61e-08!10;CL:0000540!2.31e-08!6;CL:0000031!2.31e-08!6;CL:0000404!2.31e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.96e-35;5!CL:0002541;2.44e-33;3!CL:0000148;6.63e-18;10!CL:0000540;2.88e-17;6!CL:0000404;2.88e-17;6!CL:0000147;7.18e-13;14!CL:0002321;4.99e-12;15!CL:0000710;4.48e-09;20!CL:0000075;9.13e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.15e-35,5;CL:0002541,6.28e-33,3;CL:0000148,4.47e-18,10;CL:0000541,4.47e-18,10;CL:0000540,2.97e-17,6;CL:0000031,2.97e-17,6;CL:0000404,2.97e-17,6;CL:0000047,4.28e-13,8;CL:0000147,5.43e-13,14;CL:0000710,3.70e-09,20;CL:0000133,2.74e-08,59;CL:0000075,7.94e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000031;2.88e-17;6 | |||
|ontology_enrichment_disease=DOID:3095!2.19e-07!22;DOID:2994!2.19e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.29e-21!14;UBERON:0000158!2.29e-21!14;UBERON:0000476!7.01e-16!3;UBERON:0000920!7.01e-16!3;UBERON:0000478!6.00e-12!24;UBERON:0003124!1.61e-11!7;UBERON:0000305!1.70e-11!7;UBERON:0000473!3.23e-10!8;UBERON:0004871!4.52e-10!8;UBERON:0003135!1.90e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.44e-33;3!UBERON:0000920;2.44e-33;3!UBERON:0005631;1.87e-10;10!UBERON:0000158;1.87e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.28e-33,3;UBERON:0003124,1.64e-14,7;UBERON:0005631,1.57e-07,14;UBERON:0000158,1.57e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,0,1.97529702878181,1.45125477021519,2.52320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3797869162264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3438498497671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,1.27600463892768,1.55715908783166,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,1.39866726707491,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,1.28602518772015,4.53880140770872,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80544290488219,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73548718412503,0,0,0,0,0,0,0,0.109265571963696,0,0.407955318967927,0,8.91380525487996,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:29431689..29431695,+ | |||
}} |
Latest revision as of 13:01, 23 July 2015
Short description: | p@chr10:29431689..29431695, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:29431689..29431695, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.15e-35 | 5 |
chorionic membrane mesenchymal stem cell | 6.28e-33 | 3 |
melanocyte | 4.47e-18 | 10 |
melanoblast | 4.47e-18 | 10 |
neuron | 2.97e-17 | 6 |
neuroblast | 2.97e-17 | 6 |
electrically signaling cell | 2.97e-17 | 6 |
neuronal stem cell | 4.28e-13 | 8 |
pigment cell | 5.43e-13 | 14 |
neurecto-epithelial cell | 3.70e-09 | 20 |
neurectodermal cell | 2.74e-08 | 59 |
columnar/cuboidal epithelial cell | 7.94e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.28e-33 | 3 |
chorion | 1.64e-14 | 7 |
extraembryonic membrane | 1.57e-07 | 14 |
membranous layer | 1.57e-07 | 14 |