FFCP PHASE1:Hg19::chr10:25305896..25305942,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:25305896..25305942,-
|short_description=p1@AK124767
|description=CAGE_peak_1_at_AK124767_5end
|association_with_transcript=0bp_to_AK124767_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK124767_5end | |||
|cluster_id=chr10:25305896..25305942,- | |||
|description=CAGE_peak_1_at_AK124767_5end | |||
|id=chr10:25305896..25305942,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!3.18e-12!34;UBERON:0002020!5.50e-12!34;UBERON:0003528!5.50e-12!34;UBERON:0002791!5.61e-12!33;UBERON:0001869!6.09e-12!32;UBERON:0001049!7.02e-12!57;UBERON:0005068!7.02e-12!57;UBERON:0006241!7.02e-12!57;UBERON:0007135!7.02e-12!57;UBERON:0002780!1.23e-11!41;UBERON:0001890!1.23e-11!41;UBERON:0006240!1.23e-11!41;UBERON:0005743!3.45e-11!86;UBERON:0000073!5.63e-11!94;UBERON:0001016!5.63e-11!94;UBERON:0002346!6.52e-11!90;UBERON:0003080!6.87e-11!42;UBERON:0001017!9.36e-11!82;UBERON:0003075!1.34e-10!86;UBERON:0007284!1.34e-10!86;UBERON:0002616!1.44e-10!59;UBERON:0003056!3.37e-10!61;UBERON:0000955!1.01e-09!69;UBERON:0006238!1.01e-09!69;UBERON:0000956!3.80e-08!25;UBERON:0000203!3.80e-08!25;UBERON:0000119!6.49e-08!312;UBERON:0002619!1.46e-07!22;UBERON:0000483!1.57e-07!309;UBERON:0000924!4.17e-07!173;UBERON:0006601!4.17e-07!173;UBERON:0000025!6.02e-07!194;UBERON:0001950!8.33e-07!20;UBERON:0004121!8.36e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.37e-12;32!UBERON:0001869;1.58e-12;32!UBERON:0003528;4.55e-12;34!UBERON:0002020;4.55e-12;34!UBERON:0001893;3.42e-11;34!UBERON:0002780;5.56e-11;41!UBERON:0001890;5.56e-11;41!UBERON:0002420;1.63e-10;9!UBERON:0007245;1.63e-10;9!UBERON:0010009;1.63e-10;9!UBERON:0010011;1.63e-10;9!UBERON:0000454;1.63e-10;9!UBERON:0009663;3.28e-10;7!UBERON:0000369;2.58e-09;4!UBERON:0002435;2.58e-09;4!UBERON:0000204;2.58e-09;4!UBERON:0000125;1.02e-07;9!UBERON:0002308;1.02e-07;9!UBERON:0005383;1.86e-07;3!UBERON:0005382;1.86e-07;3!UBERON:0000956;2.03e-07;25!UBERON:0000203;2.03e-07;25!UBERON:0002619;2.71e-07;22!UBERON:0000073;3.84e-07;53!UBERON:0002616;3.84e-07;53!UBERON:0001950;9.20e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.56e-14,41;UBERON:0001890,1.56e-14,41;UBERON:0003080,1.56e-14,41;UBERON:0006240,1.56e-14,41;UBERON:0002791,2.87e-14,32;UBERON:0001869,2.87e-14,32;UBERON:0003528,3.69e-13,34;UBERON:0002020,3.69e-13,34;UBERON:0001893,3.69e-13,34;UBERON:0002420,5.69e-11,9;UBERON:0007245,5.69e-11,9;UBERON:0010009,5.69e-11,9;UBERON:0010011,5.69e-11,9;UBERON:0000454,5.69e-11,9;UBERON:0009663,1.11e-10,7;UBERON:0000073,5.39e-10,53;UBERON:0002616,5.39e-10,53;UBERON:0003056,8.52e-10,61;UBERON:0000369,2.69e-09,4;UBERON:0002435,2.69e-09,4;UBERON:0000204,2.69e-09,4;UBERON:0010082,2.69e-09,4;UBERON:0001049,3.57e-09,56;UBERON:0005068,3.57e-09,56;UBERON:0006241,3.57e-09,56;UBERON:0007135,3.57e-09,56;UBERON:0000125,4.51e-08,9;UBERON:0002308,4.51e-08,9;UBERON:0000956,1.69e-07,25;UBERON:0000203,1.69e-07,25;UBERON:0005383,1.77e-07,3;UBERON:0005382,1.77e-07,3;UBERON:0002619,1.83e-07,22;UBERON:0001950,6.28e-07,20 | |||
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| ||
|short_description=p1@AK124767 | |||
}} | }} |
Latest revision as of 12:46, 23 July 2015
Short description: | p1@AK124767 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK124767_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK124767_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.56e-14 | 41 |
forebrain | 1.56e-14 | 41 |
anterior neural tube | 1.56e-14 | 41 |
future forebrain | 1.56e-14 | 41 |
regional part of telencephalon | 2.87e-14 | 32 |
cerebral hemisphere | 2.87e-14 | 32 |
brain grey matter | 3.69e-13 | 34 |
gray matter | 3.69e-13 | 34 |
telencephalon | 3.69e-13 | 34 |
basal ganglion | 5.69e-11 | 9 |
nuclear complex of neuraxis | 5.69e-11 | 9 |
aggregate regional part of brain | 5.69e-11 | 9 |
collection of basal ganglia | 5.69e-11 | 9 |
cerebral subcortex | 5.69e-11 | 9 |
telencephalic nucleus | 1.11e-10 | 7 |
regional part of nervous system | 5.39e-10 | 53 |
regional part of brain | 5.39e-10 | 53 |
pre-chordal neural plate | 8.52e-10 | 61 |
corpus striatum | 2.69e-09 | 4 |
striatum | 2.69e-09 | 4 |
ventral part of telencephalon | 2.69e-09 | 4 |
future corpus striatum | 2.69e-09 | 4 |
neural tube | 3.57e-09 | 56 |
neural rod | 3.57e-09 | 56 |
future spinal cord | 3.57e-09 | 56 |
neural keel | 3.57e-09 | 56 |
neural nucleus | 4.51e-08 | 9 |
nucleus of brain | 4.51e-08 | 9 |
cerebral cortex | 1.69e-07 | 25 |
pallium | 1.69e-07 | 25 |
caudate-putamen | 1.77e-07 | 3 |
dorsal striatum | 1.77e-07 | 3 |
regional part of cerebral cortex | 1.83e-07 | 22 |
neocortex | 6.28e-07 | 20 |