FFCP PHASE1:Hg19::chr10:22963342..22963345,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:22963342..22963345,- | |||
|coexpression_cluster_id=C1307 | |||
|description=CAGE_peak_at_chr10:22963342..22963345,- | |||
|id=chr10:22963342..22963345,- | |||
|ontology_enrichment_celltype=CL:0000037!7.33e-22!172;CL:0000566!7.33e-22!172;CL:0002032!1.67e-20!165;CL:0000837!1.67e-20!165;CL:0000988!1.08e-19!182;CL:0000738!2.23e-18!140;CL:0002031!7.83e-18!124;CL:0002087!4.82e-16!119;CL:0000838!8.65e-11!52;CL:0000763!9.32e-11!112;CL:0000049!9.32e-11!112;CL:0000542!3.04e-10!53;CL:0000051!3.04e-10!53;CL:0000839!9.69e-08!70;CL:0000791!1.07e-07!18;CL:0000789!1.07e-07!18;CL:0002420!1.07e-07!18;CL:0002419!1.07e-07!18;CL:0000790!1.07e-07!18;CL:0000766!3.73e-07!76;CL:0000557!5.05e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.93e-09;18!CL:0000789;5.93e-09;18!CL:0002419;5.93e-09;18!CL:0000625;5.82e-08;11!CL:0000623;4.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.49e-09,18;CL:0000789,6.49e-09,18;CL:0002420,6.49e-09,18;CL:0002419,6.49e-09,18;CL:0000790,6.49e-09,18;CL:0002032,2.43e-08,161;CL:0000837,2.43e-08,161;CL:0002087,2.45e-08,115;CL:0000037,3.18e-08,168;CL:0002031,3.20e-08,120;CL:0000625,5.26e-08,11;CL:0000988,2.63e-07,177;CL:0000838,3.35e-07,52;CL:0000623,3.89e-07,3;CL:0000825,3.89e-07,3;CL:0000542,5.53e-07,53;CL:0000051,5.53e-07,53;CL:0000738,5.63e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;5.93e-09;18!UBERON:0006601;6.48e-07;82!UBERON:0006241;8.16e-07;3!UBERON:0003057;8.16e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.97e-25!115;UBERON:0001049!1.14e-17!57;UBERON:0005068!1.14e-17!57;UBERON:0006241!1.14e-17!57;UBERON:0007135!1.14e-17!57;UBERON:0002780!2.02e-15!41;UBERON:0001890!2.02e-15!41;UBERON:0006240!2.02e-15!41;UBERON:0003080!1.33e-14!42;UBERON:0002020!9.21e-14!34;UBERON:0003528!9.21e-14!34;UBERON:0001893!1.47e-13!34;UBERON:0002616!2.17e-13!59;UBERON:0002791!4.85e-13!33;UBERON:0000955!1.88e-12!69;UBERON:0006238!1.88e-12!69;UBERON:0001869!2.90e-12!32;UBERON:0001017!1.35e-11!82;UBERON:0005743!4.42e-11!86;UBERON:0002346!2.07e-10!90;UBERON:0000073!3.00e-10!94;UBERON:0001016!3.00e-10!94;UBERON:0003075!4.55e-10!86;UBERON:0007284!4.55e-10!86;UBERON:0002390!1.91e-09!102;UBERON:0003061!1.91e-09!102;UBERON:0002193!5.30e-09!112;UBERON:0000956!1.91e-08!25;UBERON:0000203!1.91e-08!25;UBERON:0002619!5.87e-08!22;UBERON:0002308!2.31e-07!9;UBERON:0000125!2.31e-07!9;UBERON:0002420!2.95e-07!9;UBERON:0007245!2.95e-07!9;UBERON:0010009!2.95e-07!9;UBERON:0010011!2.95e-07!9;UBERON:0000454!2.95e-07!9;UBERON:0003056!3.71e-07!61;UBERON:0001950!5.53e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;8.45e-16;53!UBERON:0002616;8.45e-16;53!UBERON:0001893;9.12e-16;34!UBERON:0002780;4.96e-15;41!UBERON:0001890;4.96e-15;41!UBERON:0003528;6.66e-15;34!UBERON:0002020;6.66e-15;34!UBERON:0002791;9.96e-15;32!UBERON:0001869;4.02e-14;32!UBERON:0000125;8.61e-14;9!UBERON:0002308;8.61e-14;9!UBERON:0002420;2.56e-13;9!UBERON:0007245;2.56e-13;9!UBERON:0010009;2.56e-13;9!UBERON:0010011;2.56e-13;9!UBERON:0000454;2.56e-13;9!UBERON:0002298;3.27e-12;6!UBERON:0002619;3.28e-11;22!UBERON:0001950;1.75e-10;20!UBERON:0009663;4.35e-10;7!UBERON:0000956;1.56e-09;25!UBERON:0000203;1.56e-09;25!UBERON:0001017;7.87e-09;75!UBERON:0007023;2.27e-08;114!UBERON:0000955;1.72e-07;68!UBERON:0001016;2.70e-07;83!UBERON:0000988;3.29e-07;3!UBERON:0004732;5.41e-07;13!UBERON:0002240;8.16e-07;3!UBERON:0005174;8.16e-07;3!UBERON:0001137;8.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.86e-29,114;UBERON:0001049,1.05e-28,56;UBERON:0005068,1.05e-28,56;UBERON:0006241,1.05e-28,56;UBERON:0007135,1.05e-28,56;UBERON:0000073,1.25e-24,53;UBERON:0002616,1.25e-24,53;UBERON:0003075,1.42e-20,82;UBERON:0007284,1.42e-20,82;UBERON:0002780,1.65e-20,41;UBERON:0001890,1.65e-20,41;UBERON:0003080,1.65e-20,41;UBERON:0006240,1.65e-20,41;UBERON:0003528,1.31e-19,34;UBERON:0002020,1.31e-19,34;UBERON:0001893,3.34e-19,34;UBERON:0002346,3.98e-19,86;UBERON:0000955,2.78e-18,68;UBERON:0006238,2.78e-18,68;UBERON:0001017,8.47e-18,81;UBERON:0002791,1.16e-16,32;UBERON:0001016,2.27e-16,89;UBERON:0001869,2.41e-16,32;UBERON:0010371,4.80e-14,104;UBERON:0000125,5.76e-14,9;UBERON:0002308,5.76e-14,9;UBERON:0002420,1.03e-13,9;UBERON:0007245,1.03e-13,9;UBERON:0010009,1.03e-13,9;UBERON:0010011,1.03e-13,9;UBERON:0000454,1.03e-13,9;UBERON:0003056,5.80e-13,61;UBERON:0002298,6.87e-12,6;UBERON:0002619,2.61e-11,22;UBERON:0001950,1.46e-10,20;UBERON:0009663,3.01e-10,7;UBERON:0000956,1.28e-09,25;UBERON:0000203,1.28e-09,25;UBERON:0003076,2.40e-09,15;UBERON:0003057,2.40e-09,15;UBERON:0010314,4.83e-09,132;UBERON:0000988,3.74e-07,3;UBERON:0004732,7.82e-07,13;UBERON:0000349,8.87e-07,5;UBERON:0002240,9.06e-07,3;UBERON:0005174,9.06e-07,3;UBERON:0001137,9.06e-07,3 | |||
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| |||
|short_description=p@chr10:22963342..22963345,- | |||
}} |
Latest revision as of 12:37, 23 July 2015
Short description: | p@chr10:22963342..22963345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:22963342..22963345, - |
Coexpression cluster: | C1307_thalamus_globus_substantia_optic_spinal_locus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.49e-09 | 18 |
alpha-beta T cell | 6.49e-09 | 18 |
immature T cell | 6.49e-09 | 18 |
mature T cell | 6.49e-09 | 18 |
immature alpha-beta T cell | 6.49e-09 | 18 |
hematopoietic oligopotent progenitor cell | 2.43e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.43e-08 | 161 |
nongranular leukocyte | 2.45e-08 | 115 |
hematopoietic stem cell | 3.18e-08 | 168 |
hematopoietic lineage restricted progenitor cell | 3.20e-08 | 120 |
CD8-positive, alpha-beta T cell | 5.26e-08 | 11 |
hematopoietic cell | 2.63e-07 | 177 |
lymphoid lineage restricted progenitor cell | 3.35e-07 | 52 |
natural killer cell | 3.89e-07 | 3 |
pro-NK cell | 3.89e-07 | 3 |
lymphocyte | 5.53e-07 | 53 |
common lymphoid progenitor | 5.53e-07 | 53 |
leukocyte | 5.63e-07 | 136 |