FFCP PHASE1:Hg19::chr10:17117589..17117603,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:17117589..17117603,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:17117589..17117603,- | |||
|id=chr10:17117589..17117603,- | |||
|ontology_enrichment_celltype=CL:0002057!9.76e-96!42;CL:0000860!9.71e-89!45;CL:0000766!5.74e-64!76;CL:0002194!1.81e-63!63;CL:0000576!1.81e-63!63;CL:0000040!1.81e-63!63;CL:0000559!1.81e-63!63;CL:0002009!2.92e-61!65;CL:0000839!1.63e-59!70;CL:0000557!1.49e-58!71;CL:0000763!2.26e-40!112;CL:0000049!2.26e-40!112;CL:0000738!6.98e-38!140;CL:0002087!1.93e-37!119;CL:0002031!1.62e-31!124;CL:0000037!6.68e-29!172;CL:0000566!6.68e-29!172;CL:0000988!9.68e-27!182;CL:0002032!9.34e-26!165;CL:0000837!9.34e-26!165;CL:0000134!2.05e-16!358;CL:0002320!7.14e-16!365;CL:0000219!5.82e-14!390;CL:0000034!1.76e-12!444;CL:0000048!1.86e-12!430;CL:0000723!4.04e-12!436;CL:0000767!1.39e-10!3;CL:0000842!1.59e-10!3;CL:0000224!5.31e-08!4;CL:0000063!5.36e-08!578;CL:0002371!1.70e-07!591;CL:0000144!5.06e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-106;33!CL:0002057;1.34e-106;33!CL:0000473;3.23e-80;39!CL:0000234;3.23e-80;39!CL:0000576;1.91e-55;48!CL:0000766;5.37e-34;69!CL:0000763;4.56e-15;100!CL:0002087;1.67e-14;104!CL:0000738;3.10e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.50e-98,42;CL:0002057,5.50e-98,42;CL:0000473,1.08e-92,48;CL:0000234,1.08e-92,48;CL:0002194,2.17e-73,59;CL:0000576,2.17e-73,59;CL:0000040,2.17e-73,59;CL:0000559,2.17e-73,59;CL:0002009,6.74e-71,61;CL:0000839,2.56e-65,66;CL:0000557,2.67e-64,67;CL:0000766,1.25e-59,72;CL:0002087,3.40e-39,115;CL:0000763,1.25e-38,108;CL:0000049,1.25e-38,108;CL:0002031,2.12e-34,120;CL:0000738,1.45e-32,136;CL:0000037,1.28e-25,168;CL:0002032,1.16e-24,161;CL:0000837,1.16e-24,161;CL:0000988,4.10e-24,177;CL:0000134,6.12e-10,354;CL:0002320,1.16e-09,361;CL:0000219,1.12e-08,386;CL:0000048,1.79e-07,427;CL:0000723,2.63e-07,433;CL:0000034,4.31e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.09e-70;42!CL:0000049;1.39e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.54e-51!80;UBERON:0001474!8.31e-47!86;UBERON:0002390!3.01e-45!102;UBERON:0003061!3.01e-45!102;UBERON:0004765!7.84e-41!101;UBERON:0001434!7.84e-41!101;UBERON:0002193!2.37e-40!112;UBERON:0002405!1.01e-32!115;UBERON:0002204!2.19e-22!167;UBERON:0003081!8.66e-21!216;UBERON:0002384!3.92e-15!375;UBERON:0000926!7.83e-07!448;UBERON:0004120!7.83e-07!448;UBERON:0006603!7.83e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-56,76;UBERON:0001474,5.66e-52,82;UBERON:0004765,4.66e-47,90;UBERON:0002390,1.30e-46,98;UBERON:0003061,1.30e-46,98;UBERON:0002405,1.98e-45,93;UBERON:0001434,5.26e-42,100;UBERON:0002193,5.71e-42,108;UBERON:0002204,1.24e-23,167;UBERON:0003081,1.66e-20,203;UBERON:0000926,1.03e-11,315;UBERON:0004120,1.03e-11,315;UBERON:0006603,1.03e-11,315;UBERON:0002384,2.79e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0,0.802177789880567,3.47217393145363,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,2.78914844286822,2.05583944010913,3.09706370895104,5.75384784644301,2.81776777182011,7.09446689665756,14.8240642716746,12.2642089880927,8.12558919566051,0.752969358170419,1.09162460023138,2.02251136000576,8.57034898638527,5.45579346029359,8.95071976118658,0.659702600373432,0.598390972864896,1.27867425159808,1.7412554317715,1.13477044938228,4.9825779919646,5.02497330513487,6.25779502104242,5.2125322729228,3.63239701580021,0.736555271975129,3.79754864929061,0.211255286311942,0,0.419317291016752,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:17117589..17117603,- | |||
}} |
Latest revision as of 12:11, 23 July 2015
Short description: | p@chr10:17117589..17117603, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17117589..17117603, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.50e-98 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.50e-98 | 42 |
defensive cell | 1.08e-92 | 48 |
phagocyte | 1.08e-92 | 48 |
monopoietic cell | 2.17e-73 | 59 |
monocyte | 2.17e-73 | 59 |
monoblast | 2.17e-73 | 59 |
promonocyte | 2.17e-73 | 59 |
macrophage dendritic cell progenitor | 6.74e-71 | 61 |
myeloid lineage restricted progenitor cell | 2.56e-65 | 66 |
granulocyte monocyte progenitor cell | 2.67e-64 | 67 |
myeloid leukocyte | 1.25e-59 | 72 |
nongranular leukocyte | 3.40e-39 | 115 |
myeloid cell | 1.25e-38 | 108 |
common myeloid progenitor | 1.25e-38 | 108 |
hematopoietic lineage restricted progenitor cell | 2.12e-34 | 120 |
leukocyte | 1.45e-32 | 136 |
hematopoietic stem cell | 1.28e-25 | 168 |
hematopoietic oligopotent progenitor cell | 1.16e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-24 | 161 |
hematopoietic cell | 4.10e-24 | 177 |
mesenchymal cell | 6.12e-10 | 354 |
connective tissue cell | 1.16e-09 | 361 |
motile cell | 1.12e-08 | 386 |
multi fate stem cell | 1.79e-07 | 427 |
somatic stem cell | 2.63e-07 | 433 |
stem cell | 4.31e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.50e-56 | 76 |
bone element | 5.66e-52 | 82 |
skeletal element | 4.66e-47 | 90 |
hematopoietic system | 1.30e-46 | 98 |
blood island | 1.30e-46 | 98 |
immune system | 1.98e-45 | 93 |
skeletal system | 5.26e-42 | 100 |
hemolymphoid system | 5.71e-42 | 108 |
musculoskeletal system | 1.24e-23 | 167 |
lateral plate mesoderm | 1.66e-20 | 203 |
mesoderm | 1.03e-11 | 315 |
mesoderm-derived structure | 1.03e-11 | 315 |
presumptive mesoderm | 1.03e-11 | 315 |
connective tissue | 2.79e-09 | 371 |