FFCP PHASE1:Hg19::chr10:14647544..14647555,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:14647544..14647555,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:14647544..14647555,+ | |description=CAGE_peak_at_chr10:14647544..14647555,+ | ||
|id=chr10:14647544..14647555,+ | |id=chr10:14647544..14647555,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.86e-69!42;CL:0000860!7.17e-64!45;CL:0000738!1.98e-61!140;CL:0000766!1.38e-53!76;CL:0000037!8.90e-48!172;CL:0000566!8.90e-48!172;CL:0002087!4.80e-47!119;CL:0000988!1.73e-44!182;CL:0000839!1.09e-42!70;CL:0002194!2.13e-42!63;CL:0000576!2.13e-42!63;CL:0000040!2.13e-42!63;CL:0000559!2.13e-42!63;CL:0002031!2.63e-42!124;CL:0002032!4.63e-42!165;CL:0000837!4.63e-42!165;CL:0000557!5.64e-42!71;CL:0002009!7.39e-41!65;CL:0000763!1.69e-37!112;CL:0000049!1.69e-37!112;CL:0000134!1.92e-18!358;CL:0002320!7.58e-18!365;CL:0000219!9.63e-16!390;CL:0000034!2.98e-13!444;CL:0000048!3.17e-13!430;CL:0000723!7.23e-13!436;CL:0000767!1.41e-11!3;CL:0000094!7.67e-11!8;CL:0000842!2.49e-10!3;CL:0000623!4.87e-10!3;CL:0000825!4.87e-10!3;CL:0002393!3.55e-09!9;CL:0002397!3.55e-09!9;CL:0000224!7.55e-08!4;CL:0000081!9.05e-08!11;CL:0000063!4.19e-07!578 | |ontology_enrichment_celltype=CL:0002057!4.86e-69!42;CL:0000860!7.17e-64!45;CL:0000738!1.98e-61!140;CL:0000766!1.38e-53!76;CL:0000037!8.90e-48!172;CL:0000566!8.90e-48!172;CL:0002087!4.80e-47!119;CL:0000988!1.73e-44!182;CL:0000839!1.09e-42!70;CL:0002194!2.13e-42!63;CL:0000576!2.13e-42!63;CL:0000040!2.13e-42!63;CL:0000559!2.13e-42!63;CL:0002031!2.63e-42!124;CL:0002032!4.63e-42!165;CL:0000837!4.63e-42!165;CL:0000557!5.64e-42!71;CL:0002009!7.39e-41!65;CL:0000763!1.69e-37!112;CL:0000049!1.69e-37!112;CL:0000134!1.92e-18!358;CL:0002320!7.58e-18!365;CL:0000219!9.63e-16!390;CL:0000034!2.98e-13!444;CL:0000048!3.17e-13!430;CL:0000723!7.23e-13!436;CL:0000767!1.41e-11!3;CL:0000094!7.67e-11!8;CL:0000842!2.49e-10!3;CL:0000623!4.87e-10!3;CL:0000825!4.87e-10!3;CL:0002393!3.55e-09!9;CL:0002397!3.55e-09!9;CL:0000224!7.55e-08!4;CL:0000081!9.05e-08!11;CL:0000063!4.19e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.17e-44;33!CL:0002057;8.17e-44;33!CL:0000576;4.70e-30;48!CL:0000473;1.85e-29;39!CL:0000234;1.85e-29;39!CL:0000767;2.39e-27;3!CL:0000766;1.05e-21;69!CL:0000094;5.27e-18;8!CL:0002393;9.29e-14;6!CL:0002397;9.29e-14;6!CL:0000081;3.72e-13;11!CL:0000763;3.96e-12;100!CL:0002087;9.45e-12;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-56,42;CL:0002057,1.08e-56,42;CL:0000766,2.40e-49,72;CL:0000473,2.82e-49,48;CL:0000234,2.82e-49,48;CL:0002194,7.00e-39,59;CL:0000576,7.00e-39,59;CL:0000040,7.00e-39,59;CL:0000559,7.00e-39,59;CL:0002009,1.54e-37,61;CL:0000839,1.56e-34,66;CL:0000557,5.51e-34,67;CL:0000763,4.93e-32,108;CL:0000049,4.93e-32,108;CL:0000738,1.82e-27,136;CL:0000767,2.50e-27,3;CL:0000037,1.18e-21,168;CL:0002087,3.37e-21,115;CL:0002032,1.64e-20,161;CL:0000837,1.64e-20,161;CL:0000988,2.15e-20,177;CL:0000094,5.05e-18,8;CL:0002031,7.21e-18,120;CL:0000081,3.61e-13,11;CL:0002393,2.16e-09,9;CL:0002397,2.16e-09,9;CL:0000134,1.63e-08,354;CL:0002320,2.79e-08,361;CL:0000219,1.87e-07,386;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-38;42!CL:0000049;6.43e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.49e-36!80;UBERON:0001474!3.22e-33!86;UBERON:0002390!1.12e-32!102;UBERON:0003061!1.12e-32!102;UBERON:0002193!5.93e-29!112;UBERON:0004765!4.75e-27!101;UBERON:0001434!4.75e-27!101;UBERON:0002405!9.63e-23!115;UBERON:0002384!4.94e-17!375;UBERON:0002204!4.14e-13!167;UBERON:0003081!1.86e-12!216 | |ontology_enrichment_uberon=UBERON:0002371!2.49e-36!80;UBERON:0001474!3.22e-33!86;UBERON:0002390!1.12e-32!102;UBERON:0003061!1.12e-32!102;UBERON:0002193!5.93e-29!112;UBERON:0004765!4.75e-27!101;UBERON:0001434!4.75e-27!101;UBERON:0002405!9.63e-23!115;UBERON:0002384!4.94e-17!375;UBERON:0002204!4.14e-13!167;UBERON:0003081!1.86e-12!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.09e-29,76;UBERON:0001474,2.41e-27,82;UBERON:0002390,2.41e-25,98;UBERON:0003061,2.41e-25,98;UBERON:0004765,1.08e-24,90;UBERON:0002405,8.13e-24,93;UBERON:0002193,9.47e-23,108;UBERON:0001434,5.70e-22,100;UBERON:0002204,4.64e-12,167;UBERON:0003081,9.52e-11,203;UBERON:0002384,5.82e-08,371 | |||
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|short_description=p@chr10:14647544..14647555,+ | |short_description=p@chr10:14647544..14647555,+ | ||
}} | }} |
Latest revision as of 12:02, 23 July 2015
Short description: | p@chr10:14647544..14647555, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:14647544..14647555, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.08e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-56 | 42 |
myeloid leukocyte | 2.40e-49 | 72 |
defensive cell | 2.82e-49 | 48 |
phagocyte | 2.82e-49 | 48 |
monopoietic cell | 7.00e-39 | 59 |
monocyte | 7.00e-39 | 59 |
monoblast | 7.00e-39 | 59 |
promonocyte | 7.00e-39 | 59 |
macrophage dendritic cell progenitor | 1.54e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.56e-34 | 66 |
granulocyte monocyte progenitor cell | 5.51e-34 | 67 |
myeloid cell | 4.93e-32 | 108 |
common myeloid progenitor | 4.93e-32 | 108 |
leukocyte | 1.82e-27 | 136 |
basophil | 2.50e-27 | 3 |
hematopoietic stem cell | 1.18e-21 | 168 |
nongranular leukocyte | 3.37e-21 | 115 |
hematopoietic oligopotent progenitor cell | 1.64e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-20 | 161 |
hematopoietic cell | 2.15e-20 | 177 |
granulocyte | 5.05e-18 | 8 |
hematopoietic lineage restricted progenitor cell | 7.21e-18 | 120 |
blood cell | 3.61e-13 | 11 |
intermediate monocyte | 2.16e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.16e-09 | 9 |
mesenchymal cell | 1.63e-08 | 354 |
connective tissue cell | 2.79e-08 | 361 |
motile cell | 1.87e-07 | 386 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.09e-29 | 76 |
bone element | 2.41e-27 | 82 |
hematopoietic system | 2.41e-25 | 98 |
blood island | 2.41e-25 | 98 |
skeletal element | 1.08e-24 | 90 |
immune system | 8.13e-24 | 93 |
hemolymphoid system | 9.47e-23 | 108 |
skeletal system | 5.70e-22 | 100 |
musculoskeletal system | 4.64e-12 | 167 |
lateral plate mesoderm | 9.52e-11 | 203 |
connective tissue | 5.82e-08 | 371 |