FFCP PHASE1:Hg19::chr10:13760131..13760142,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:13760131..13760142,+ | |||
|description=CAGE_peak_at_chr10:13760131..13760142,+ | |description=CAGE_peak_at_chr10:13760131..13760142,+ | ||
|id=chr10:13760131..13760142,+ | |id=chr10:13760131..13760142,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.25e-08!4 | |ontology_enrichment_celltype=CL:0002563!8.25e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;2.71e-40;4!CL:0002253;4.66e-21;2!CL:0002231;1.60e-14;3!CL:0002076;9.55e-10;42!CL:0002251;5.93e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.71e-40,4;CL:0002253,5.70e-21,2;CL:0002231,1.60e-14,3;CL:0002076,2.66e-09,42;CL:0002251,5.93e-09,20;CL:0000223,6.14e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.09e-10!34;UBERON:0003528!2.09e-10!34;UBERON:0001049!3.11e-09!57;UBERON:0005068!3.11e-09!57;UBERON:0006241!3.11e-09!57;UBERON:0007135!3.11e-09!57;UBERON:0002616!7.25e-09!59;UBERON:0001869!1.53e-08!32;UBERON:0002791!2.89e-08!33;UBERON:0001301!4.07e-08!1;UBERON:0007023!4.36e-08!115;UBERON:0001893!5.24e-08!34;UBERON:0001242!8.25e-08!4;UBERON:0001262!8.25e-08!4;UBERON:0004786!8.25e-08!4;UBERON:0004808!8.25e-08!4;UBERON:0001277!8.25e-08!4;UBERON:0001874!8.51e-08!1;UBERON:0002581!9.72e-08!1;UBERON:0001882!1.75e-07!1;UBERON:0005403!1.75e-07!1;UBERON:0001950!2.43e-07!20;UBERON:0000955!3.08e-07!69;UBERON:0006238!3.08e-07!69;UBERON:0000369!3.13e-07!4;UBERON:0002435!3.13e-07!4;UBERON:0000204!3.13e-07!4;UBERON:0010082!3.13e-07!4;UBERON:0000073!3.40e-07!94;UBERON:0001016!3.40e-07!94;UBERON:0001017!3.45e-07!82;UBERON:0002308!7.26e-07!9;UBERON:0000125!7.26e-07!9;UBERON:0005743!8.91e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.71e-40;4!UBERON:0001262;2.71e-40;4!UBERON:0004786;2.71e-40;4!UBERON:0004808;2.71e-40;4!UBERON:0001277;2.71e-40;4!UBERON:0000485;1.44e-23;7!UBERON:0003929;1.44e-23;7!UBERON:0003350;8.98e-21;8!UBERON:0001052;3.10e-11;4!UBERON:0000160;7.75e-10;17!UBERON:0004907;2.97e-09;5!UBERON:0000344;5.93e-09;20!UBERON:0005409;6.52e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.71e-40,4;UBERON:0001262,2.71e-40,4;UBERON:0004786,2.71e-40,4;UBERON:0004808,2.71e-40,4;UBERON:0001277,2.71e-40,4;UBERON:0003350,8.98e-21,8;UBERON:0000485,1.35e-18,9;UBERON:0001052,3.42e-11,4;UBERON:0000160,7.76e-10,17;UBERON:0001046,2.36e-09,19;UBERON:0004907,3.22e-09,5;UBERON:0000344,5.93e-09,20;UBERON:0003929,2.12e-07,54;UBERON:0005409,4.15e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26164914294305,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26164914294305,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr10:13760131..13760142,+ | |short_description=p@chr10:13760131..13760142,+ | ||
}} | }} |
Latest revision as of 11:57, 23 July 2015
Short description: | p@chr10:13760131..13760142, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:13760131..13760142, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.71e-40 | 4 |
epithelial cell of large intestine | 5.70e-21 | 2 |
epithelial cell of prostate | 1.60e-14 | 3 |
endo-epithelial cell | 2.66e-09 | 42 |
epithelial cell of alimentary canal | 5.93e-09 | 20 |
endodermal cell | 6.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.71e-40 | 4 |
wall of intestine | 2.71e-40 | 4 |
gastrointestinal system mucosa | 2.71e-40 | 4 |
gastrointestinal system epithelium | 2.71e-40 | 4 |
intestinal epithelium | 2.71e-40 | 4 |
epithelium of mucosa | 8.98e-21 | 8 |
simple columnar epithelium | 1.35e-18 | 9 |
rectum | 3.42e-11 | 4 |
intestine | 7.76e-10 | 17 |
hindgut | 2.36e-09 | 19 |
lower digestive tract | 3.22e-09 | 5 |
mucosa | 5.93e-09 | 20 |
gut epithelium | 2.12e-07 | 54 |
gastrointestinal system | 4.15e-07 | 25 |