FFCP PHASE1:Hg19::chr10:135345657..135345663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:135345657..135345663,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:135345657..135345663,+ | |||
|id=chr10:135345657..135345663,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.06e-15!12;CL:0000417!1.06e-15!12;CL:0000668!1.06e-15!12;CL:0000414!1.06e-15!12;CL:0000412!1.06e-15!12;CL:0000182!1.06e-15!12;CL:0000239!6.78e-08!3;CL:1000615!6.78e-08!3;CL:0002306!6.78e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!4.98e-20!25;UBERON:0000015!4.98e-20!25;UBERON:0002423!4.98e-20!25;UBERON:0006235!4.98e-20!25;UBERON:0004161!4.98e-20!25;UBERON:0002107!3.05e-17!19;UBERON:0006925!3.05e-17!19;UBERON:0008836!3.05e-17!19;UBERON:0008835!5.98e-15!22;UBERON:0003894!5.98e-15!22;UBERON:0009854!2.56e-14!23;UBERON:0007499!3.33e-13!25;UBERON:0005172!5.93e-13!55;UBERON:0005173!5.93e-13!55;UBERON:0005057!1.04e-12!26;UBERON:0009856!1.04e-12!26;UBERON:0002417!1.13e-11!61;UBERON:0000916!1.13e-11!61;UBERON:0002365!1.01e-10!31;UBERON:0002330!1.01e-10!31;UBERON:0002368!1.56e-09!35;UBERON:0003929!2.36e-09!54;UBERON:0005177!7.48e-09!107;UBERON:0006853!6.78e-08!3;UBERON:0007685!6.78e-08!3;UBERON:0004134!6.78e-08!3;UBERON:0002240!7.26e-08!3;UBERON:0002110!8.29e-08!3;UBERON:0006242!8.29e-08!3;UBERON:0000949!1.76e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.97e-28;19!UBERON:0006925;2.97e-28;19!UBERON:0002423;1.18e-21;25!UBERON:0002365;3.66e-18;31!UBERON:0002330;3.66e-18;31!UBERON:0002368;1.21e-14;33!UBERON:0000949;2.72e-12;43!UBERON:0005172;4.55e-09;52!UBERON:0005173;4.55e-09;52!UBERON:0002530;7.35e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.86e-28,19;UBERON:0006925,2.86e-28,19;UBERON:0008836,2.86e-28,19;UBERON:0008835,1.61e-24,22;UBERON:0003894,1.61e-24,22;UBERON:0009854,1.74e-23,23;UBERON:0007499,1.15e-21,25;UBERON:0009497,1.15e-21,25;UBERON:0000015,1.15e-21,25;UBERON:0002423,1.15e-21,25;UBERON:0006235,1.15e-21,25;UBERON:0004161,1.15e-21,25;UBERON:0009856,7.34e-21,26;UBERON:0002365,1.31e-17,31;UBERON:0002330,1.31e-17,31;UBERON:0002368,1.13e-15,35;UBERON:0000949,2.51e-12,45;UBERON:0003929,2.28e-10,54;UBERON:0005172,2.28e-10,54;UBERON:0005173,2.28e-10,54;UBERON:0002530,1.55e-09,59;UBERON:0002417,2.20e-09,60;UBERON:0000916,2.20e-09,60;UBERON:0005911,5.36e-07,82 | |||
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|short_description=p@chr10:135345657..135345663,+ | |||
}} | }} |
Latest revision as of 11:55, 23 July 2015
Short description: | p@chr10:135345657..135345663, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135345657..135345663, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.86e-28 | 19 |
digestive gland | 2.86e-28 | 19 |
liver bud | 2.86e-28 | 19 |
hepatic diverticulum | 1.61e-24 | 22 |
liver primordium | 1.61e-24 | 22 |
digestive tract diverticulum | 1.74e-23 | 23 |
epithelial sac | 1.15e-21 | 25 |
epithelium of foregut-midgut junction | 1.15e-21 | 25 |
anatomical boundary | 1.15e-21 | 25 |
hepatobiliary system | 1.15e-21 | 25 |
foregut-midgut junction | 1.15e-21 | 25 |
septum transversum | 1.15e-21 | 25 |
sac | 7.34e-21 | 26 |
exocrine gland | 1.31e-17 | 31 |
exocrine system | 1.31e-17 | 31 |
endocrine gland | 1.13e-15 | 35 |
endocrine system | 2.51e-12 | 45 |
gut epithelium | 2.28e-10 | 54 |
abdomen element | 2.28e-10 | 54 |
abdominal segment element | 2.28e-10 | 54 |
gland | 1.55e-09 | 59 |
abdominal segment of trunk | 2.20e-09 | 60 |
abdomen | 2.20e-09 | 60 |
endo-epithelium | 5.36e-07 | 82 |