FFCP PHASE1:Hg19::chr10:134781213..134781218,-: Difference between revisions
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|id=chr10:134781213..134781218,-
|short_description=p@chr10:134781213..134781218,-
|description=CAGE_peak_at_chr10:134781213..134781218,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:134781213..134781218,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:134781213..134781218,- | |||
|id=chr10:134781213..134781218,- | |||
|ontology_enrichment_celltype=CL:0000860!5.61e-74!45;CL:0002057!1.04e-68!42;CL:0002009!3.64e-56!65;CL:0002194!8.89e-53!63;CL:0000576!8.89e-53!63;CL:0000040!8.89e-53!63;CL:0000559!8.89e-53!63;CL:0000557!2.84e-50!71;CL:0000839!3.37e-46!70;CL:0000766!5.04e-46!76;CL:0000763!3.57e-36!112;CL:0000049!3.57e-36!112;CL:0002087!5.97e-30!119;CL:0000738!1.32e-28!140;CL:0002031!2.33e-28!124;CL:0000037!9.47e-25!172;CL:0000566!9.47e-25!172;CL:0002032!3.46e-24!165;CL:0000837!3.46e-24!165;CL:0000988!1.65e-22!182;CL:0002393!6.74e-13!9;CL:0002397!6.74e-13!9;CL:0000875!5.73e-07!3;CL:0002396!5.73e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.40e-54;33!CL:0002057;4.40e-54;33!CL:0000473;1.29e-41;39!CL:0000234;1.29e-41;39!CL:0000576;6.88e-24;48!CL:0000766;7.56e-16;69!CL:0000763;3.86e-08;100!CL:0002087;2.53e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.17e-46,42;CL:0002057,3.17e-46,42;CL:0000473,4.21e-40,48;CL:0000234,4.21e-40,48;CL:0002009,1.79e-34,61;CL:0002194,1.60e-31,59;CL:0000576,1.60e-31,59;CL:0000040,1.60e-31,59;CL:0000559,1.60e-31,59;CL:0000557,3.59e-31,67;CL:0000766,6.40e-29,72;CL:0000839,6.20e-28,66;CL:0000763,8.88e-21,108;CL:0000049,8.88e-21,108;CL:0002031,2.62e-18,120;CL:0000738,7.32e-18,136;CL:0002087,5.50e-17,115;CL:0002032,1.38e-14,161;CL:0000837,1.38e-14,161;CL:0000037,7.69e-14,168;CL:0000988,5.72e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.56e-36;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.37e-43!80;UBERON:0002390!1.21e-42!102;UBERON:0003061!1.21e-42!102;UBERON:0001474!3.96e-39!86;UBERON:0002193!4.67e-39!112;UBERON:0002405!2.08e-34!115;UBERON:0004765!2.66e-31!101;UBERON:0001434!2.66e-31!101;UBERON:0003081!8.19e-15!216;UBERON:0002204!8.28e-14!167;UBERON:0000926!7.02e-09!448;UBERON:0004120!7.02e-09!448;UBERON:0006603!7.02e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.53e-27,76;UBERON:0001474,5.37e-25,82;UBERON:0002390,3.89e-23,98;UBERON:0003061,3.89e-23,98;UBERON:0004765,1.56e-22,90;UBERON:0002405,1.02e-21,93;UBERON:0002193,1.01e-20,108;UBERON:0001434,5.30e-20,100;UBERON:0002204,8.48e-11,167;UBERON:0003081,1.46e-09,203 | |||
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| ||
|short_description=p@chr10:134781213..134781218,- | |||
}} | }} |
Latest revision as of 11:48, 23 July 2015
Short description: | p@chr10:134781213..134781218, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134781213..134781218, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.17e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.17e-46 | 42 |
defensive cell | 4.21e-40 | 48 |
phagocyte | 4.21e-40 | 48 |
macrophage dendritic cell progenitor | 1.79e-34 | 61 |
monopoietic cell | 1.60e-31 | 59 |
monocyte | 1.60e-31 | 59 |
monoblast | 1.60e-31 | 59 |
promonocyte | 1.60e-31 | 59 |
granulocyte monocyte progenitor cell | 3.59e-31 | 67 |
myeloid leukocyte | 6.40e-29 | 72 |
myeloid lineage restricted progenitor cell | 6.20e-28 | 66 |
myeloid cell | 8.88e-21 | 108 |
common myeloid progenitor | 8.88e-21 | 108 |
hematopoietic lineage restricted progenitor cell | 2.62e-18 | 120 |
leukocyte | 7.32e-18 | 136 |
nongranular leukocyte | 5.50e-17 | 115 |
hematopoietic oligopotent progenitor cell | 1.38e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-14 | 161 |
hematopoietic stem cell | 7.69e-14 | 168 |
hematopoietic cell | 5.72e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.53e-27 | 76 |
bone element | 5.37e-25 | 82 |
hematopoietic system | 3.89e-23 | 98 |
blood island | 3.89e-23 | 98 |
skeletal element | 1.56e-22 | 90 |
immune system | 1.02e-21 | 93 |
hemolymphoid system | 1.01e-20 | 108 |
skeletal system | 5.30e-20 | 100 |
musculoskeletal system | 8.48e-11 | 167 |
lateral plate mesoderm | 1.46e-09 | 203 |