FFCP PHASE1:Hg19::chr10:132102982..132102986,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:132102982..132102986,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:132102982..132102986,+ | |description=CAGE_peak_at_chr10:132102982..132102986,+ | ||
|id=chr10:132102982..132102986,+ | |id=chr10:132102982..132102986,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.74e-121!42;CL:0000860!6.65e-113!45;CL:0002194!3.95e-87!63;CL:0000576!3.95e-87!63;CL:0000040!3.95e-87!63;CL:0000559!3.95e-87!63;CL:0002009!2.91e-84!65;CL:0000766!7.54e-80!76;CL:0000839!8.42e-78!70;CL:0000557!1.29e-76!71;CL:0000763!5.92e-52!112;CL:0000049!5.92e-52!112;CL:0002087!1.43e-45!119;CL:0002031!1.93e-43!124;CL:0000738!1.83e-42!140;CL:0002032!7.01e-35!165;CL:0000837!7.01e-35!165;CL:0000037!3.78e-33!172;CL:0000566!3.78e-33!172;CL:0000988!9.21e-33!182;CL:0000134!9.56e-13!358;CL:0002320!2.41e-12!365;CL:0002393!2.80e-12!9;CL:0002397!2.80e-12!9;CL:0000219!6.27e-11!390;CL:0000048!4.75e-10!430;CL:0000723!8.51e-10!436;CL:0000034!1.81e-09!444 | |ontology_enrichment_celltype=CL:0002057!1.74e-121!42;CL:0000860!6.65e-113!45;CL:0002194!3.95e-87!63;CL:0000576!3.95e-87!63;CL:0000040!3.95e-87!63;CL:0000559!3.95e-87!63;CL:0002009!2.91e-84!65;CL:0000766!7.54e-80!76;CL:0000839!8.42e-78!70;CL:0000557!1.29e-76!71;CL:0000763!5.92e-52!112;CL:0000049!5.92e-52!112;CL:0002087!1.43e-45!119;CL:0002031!1.93e-43!124;CL:0000738!1.83e-42!140;CL:0002032!7.01e-35!165;CL:0000837!7.01e-35!165;CL:0000037!3.78e-33!172;CL:0000566!3.78e-33!172;CL:0000988!9.21e-33!182;CL:0000134!9.56e-13!358;CL:0002320!2.41e-12!365;CL:0002393!2.80e-12!9;CL:0002397!2.80e-12!9;CL:0000219!6.27e-11!390;CL:0000048!4.75e-10!430;CL:0000723!8.51e-10!436;CL:0000034!1.81e-09!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.23e-99;33!CL:0002057;1.23e-99;33!CL:0000473;6.25e-76;39!CL:0000234;6.25e-76;39!CL:0000576;4.85e-46;48!CL:0000766;5.47e-30;69!CL:0000763;8.60e-16;100!CL:0002087;4.74e-15;104!CL:0000738;9.99e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-92,42;CL:0002057,1.34e-92,42;CL:0000473,3.30e-88,48;CL:0000234,3.30e-88,48;CL:0002194,6.22e-70,59;CL:0000576,6.22e-70,59;CL:0000040,6.22e-70,59;CL:0000559,6.22e-70,59;CL:0002009,1.42e-67,61;CL:0000839,2.73e-62,66;CL:0000766,3.95e-62,72;CL:0000557,2.51e-61,67;CL:0000763,1.60e-40,108;CL:0000049,1.60e-40,108;CL:0002087,1.39e-34,115;CL:0002031,5.16e-33,120;CL:0000738,1.50e-31,136;CL:0002032,3.76e-26,161;CL:0000837,3.76e-26,161;CL:0000037,6.33e-25,168;CL:0000988,1.73e-23,177;CL:0000134,5.77e-10,354;CL:0002320,1.06e-09,361;CL:0000219,9.21e-09,386;CL:0000048,1.30e-07,427;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-68;42!CL:0000049;3.18e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.88e-67!80;UBERON:0001474!4.15e-62!86;UBERON:0002390!2.44e-54!102;UBERON:0003061!2.44e-54!102;UBERON:0004765!7.32e-52!101;UBERON:0001434!7.32e-52!101;UBERON:0002193!7.50e-49!112;UBERON:0002405!1.10e-44!115;UBERON:0002204!2.08e-30!167;UBERON:0003081!8.80e-25!216;UBERON:0002384!8.50e-12!375;UBERON:0000926!1.69e-08!448;UBERON:0004120!1.69e-08!448;UBERON:0006603!1.69e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!2.88e-67!80;UBERON:0001474!4.15e-62!86;UBERON:0002390!2.44e-54!102;UBERON:0003061!2.44e-54!102;UBERON:0004765!7.32e-52!101;UBERON:0001434!7.32e-52!101;UBERON:0002193!7.50e-49!112;UBERON:0002405!1.10e-44!115;UBERON:0002204!2.08e-30!167;UBERON:0003081!8.80e-25!216;UBERON:0002384!8.50e-12!375;UBERON:0000926!1.69e-08!448;UBERON:0004120!1.69e-08!448;UBERON:0006603!1.69e-08!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.85e-54,76;UBERON:0001474,1.18e-49,82;UBERON:0004765,5.32e-45,90;UBERON:0002405,1.85e-43,93;UBERON:0002390,4.27e-41,98;UBERON:0003061,4.27e-41,98;UBERON:0001434,3.24e-40,100;UBERON:0002193,5.09e-37,108;UBERON:0002204,8.12e-23,167;UBERON:0003081,3.60e-18,203;UBERON:0000926,1.94e-10,315;UBERON:0004120,1.94e-10,315;UBERON:0006603,1.94e-10,315;UBERON:0002384,2.45e-09,371 | |||
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|short_description=p@chr10:132102982..132102986,+ | |short_description=p@chr10:132102982..132102986,+ | ||
}} | }} |
Latest revision as of 11:42, 23 July 2015
Short description: | p@chr10:132102982..132102986, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:132102982..132102986, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.34e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-92 | 42 |
defensive cell | 3.30e-88 | 48 |
phagocyte | 3.30e-88 | 48 |
monopoietic cell | 6.22e-70 | 59 |
monocyte | 6.22e-70 | 59 |
monoblast | 6.22e-70 | 59 |
promonocyte | 6.22e-70 | 59 |
macrophage dendritic cell progenitor | 1.42e-67 | 61 |
myeloid lineage restricted progenitor cell | 2.73e-62 | 66 |
myeloid leukocyte | 3.95e-62 | 72 |
granulocyte monocyte progenitor cell | 2.51e-61 | 67 |
myeloid cell | 1.60e-40 | 108 |
common myeloid progenitor | 1.60e-40 | 108 |
nongranular leukocyte | 1.39e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 5.16e-33 | 120 |
leukocyte | 1.50e-31 | 136 |
hematopoietic oligopotent progenitor cell | 3.76e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.76e-26 | 161 |
hematopoietic stem cell | 6.33e-25 | 168 |
hematopoietic cell | 1.73e-23 | 177 |
mesenchymal cell | 5.77e-10 | 354 |
connective tissue cell | 1.06e-09 | 361 |
motile cell | 9.21e-09 | 386 |
multi fate stem cell | 1.30e-07 | 427 |
somatic stem cell | 1.87e-07 | 433 |
stem cell | 3.01e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.85e-54 | 76 |
bone element | 1.18e-49 | 82 |
skeletal element | 5.32e-45 | 90 |
immune system | 1.85e-43 | 93 |
hematopoietic system | 4.27e-41 | 98 |
blood island | 4.27e-41 | 98 |
skeletal system | 3.24e-40 | 100 |
hemolymphoid system | 5.09e-37 | 108 |
musculoskeletal system | 8.12e-23 | 167 |
lateral plate mesoderm | 3.60e-18 | 203 |
mesoderm | 1.94e-10 | 315 |
mesoderm-derived structure | 1.94e-10 | 315 |
presumptive mesoderm | 1.94e-10 | 315 |
connective tissue | 2.45e-09 | 371 |