FFCP PHASE1:Hg19::chr10:129717770..129717798,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:129717770..129717798,+ | |||
|coexpression_cluster_id=C973 | |coexpression_cluster_id=C973 | ||
|description=CAGE_peak_at_chr10:129717770..129717798,+ | |description=CAGE_peak_at_chr10:129717770..129717798,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;6.61e-12;1!CL:0000911;6.61e-12;1!CL:0000814;6.61e-12;1 | |ontology_enrichment_celltype_v019=CL:0002127;6.61e-12;1!CL:0000911;6.61e-12;1!CL:0000814;6.61e-12;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.95e-12,161;CL:0000837,1.95e-12,161;CL:0002127,6.26e-12,1;CL:0000914,6.26e-12,1;CL:0000911,6.26e-12,1;CL:0000814,6.26e-12,1;CL:0002042,6.26e-12,1;CL:0002039,6.26e-12,1;CL:0002040,6.26e-12,1;CL:0002041,6.26e-12,1;CL:0000037,7.90e-12,168;CL:0000988,4.08e-11,177;CL:0000763,2.29e-08,108;CL:0000049,2.29e-08,108 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!1.40e-13!51;DOID:0060083!1.40e-13!51;DOID:1240!1.28e-12!39;DOID:8692!1.22e-11!31 | |ontology_enrichment_disease=DOID:2531!1.40e-13!51;DOID:0060083!1.40e-13!51;DOID:1240!1.28e-12!39;DOID:8692!1.22e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.40e-31;31!DOID:1240;1.29e-27;39!DOID:74;2.56e-22;2!DOID:2531;6.47e-20;51!DOID:0060083;6.47e-20;51!DOID:225;4.78e-12;1!DOID:2355;4.78e-12;1!DOID:1287;1.19e-11;4 | |ontology_enrichment_disease_v019=DOID:8692;2.40e-31;31!DOID:1240;1.29e-27;39!DOID:74;2.56e-22;2!DOID:2531;6.47e-20;51!DOID:0060083;6.47e-20;51!DOID:225;4.78e-12;1!DOID:2355;4.78e-12;1!DOID:1287;1.19e-11;4 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,3.02e-37,39;DOID:2531,4.17e-33,51;DOID:0060083,4.17e-33,51;DOID:8692,7.51e-33,31;DOID:74,2.85e-22,2;DOID:225,4.53e-12,1;DOID:2355,5.62e-12,1;DOID:1287,1.26e-11,4;DOID:0050686,4.88e-11,137;DOID:162,7.97e-08,235;DOID:14566,1.30e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000955!4.40e-18!69;UBERON:0006238!4.40e-18!69;UBERON:0001017!1.78e-17!82;UBERON:0005743!2.47e-17!86;UBERON:0000073!9.14e-17!94;UBERON:0001016!9.14e-17!94;UBERON:0001049!1.27e-16!57;UBERON:0005068!1.27e-16!57;UBERON:0006241!1.27e-16!57;UBERON:0007135!1.27e-16!57;UBERON:0001893!3.33e-15!34;UBERON:0002020!4.19e-15!34;UBERON:0003528!4.19e-15!34;UBERON:0002780!7.82e-15!41;UBERON:0001890!7.82e-15!41;UBERON:0006240!7.82e-15!41;UBERON:0002616!2.33e-14!59;UBERON:0003080!2.41e-14!42;UBERON:0002791!4.05e-14!33;UBERON:0001869!5.42e-13!32;UBERON:0002346!3.43e-12!90;UBERON:0003075!3.46e-12!86;UBERON:0007284!3.46e-12!86;UBERON:0007023!9.18e-12!115;UBERON:0001950!8.54e-10!20;UBERON:0002420!4.31e-09!9;UBERON:0007245!4.31e-09!9;UBERON:0010009!4.31e-09!9;UBERON:0010011!4.31e-09!9;UBERON:0000454!4.31e-09!9;UBERON:0003056!4.52e-09!61;UBERON:0000153!4.53e-09!129;UBERON:0007811!4.53e-09!129;UBERON:0002308!7.10e-09!9;UBERON:0000125!7.10e-09!9;UBERON:0002619!1.07e-08!22;UBERON:0000956!1.14e-08!25;UBERON:0000203!1.14e-08!25;UBERON:0000033!2.04e-08!123;UBERON:0002298!1.61e-07!8 | |ontology_enrichment_uberon=UBERON:0000955!4.40e-18!69;UBERON:0006238!4.40e-18!69;UBERON:0001017!1.78e-17!82;UBERON:0005743!2.47e-17!86;UBERON:0000073!9.14e-17!94;UBERON:0001016!9.14e-17!94;UBERON:0001049!1.27e-16!57;UBERON:0005068!1.27e-16!57;UBERON:0006241!1.27e-16!57;UBERON:0007135!1.27e-16!57;UBERON:0001893!3.33e-15!34;UBERON:0002020!4.19e-15!34;UBERON:0003528!4.19e-15!34;UBERON:0002780!7.82e-15!41;UBERON:0001890!7.82e-15!41;UBERON:0006240!7.82e-15!41;UBERON:0002616!2.33e-14!59;UBERON:0003080!2.41e-14!42;UBERON:0002791!4.05e-14!33;UBERON:0001869!5.42e-13!32;UBERON:0002346!3.43e-12!90;UBERON:0003075!3.46e-12!86;UBERON:0007284!3.46e-12!86;UBERON:0007023!9.18e-12!115;UBERON:0001950!8.54e-10!20;UBERON:0002420!4.31e-09!9;UBERON:0007245!4.31e-09!9;UBERON:0010009!4.31e-09!9;UBERON:0010011!4.31e-09!9;UBERON:0000454!4.31e-09!9;UBERON:0003056!4.52e-09!61;UBERON:0000153!4.53e-09!129;UBERON:0007811!4.53e-09!129;UBERON:0002308!7.10e-09!9;UBERON:0000125!7.10e-09!9;UBERON:0002619!1.07e-08!22;UBERON:0000956!1.14e-08!25;UBERON:0000203!1.14e-08!25;UBERON:0000033!2.04e-08!123;UBERON:0002298!1.61e-07!8 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr10:129717770..129717798,+ | |short_description=p@chr10:129717770..129717798,+ | ||
}} | }} |
Latest revision as of 11:36, 23 July 2015
Short description: | p@chr10:129717770..129717798, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129717770..129717798, + |
Coexpression cluster: | C973_acute_granulocyte_CD34_CD133_myelodysplastic_biphenotypic_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.95e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-12 | 161 |
innate effector T cell | 6.26e-12 | 1 |
immature NK T cell | 6.26e-12 | 1 |
effector T cell | 6.26e-12 | 1 |
mature NK T cell | 6.26e-12 | 1 |
immature NK T cell stage IV | 6.26e-12 | 1 |
immature NK T cell stage I | 6.26e-12 | 1 |
immature NK T cell stage II | 6.26e-12 | 1 |
immature NK T cell stage III | 6.26e-12 | 1 |
hematopoietic stem cell | 7.90e-12 | 168 |
hematopoietic cell | 4.08e-11 | 177 |
myeloid cell | 2.29e-08 | 108 |
common myeloid progenitor | 2.29e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.02e-37 | 39 |
hematologic cancer | 4.17e-33 | 51 |
immune system cancer | 4.17e-33 | 51 |
myeloid leukemia | 7.51e-33 | 31 |
hematopoietic system disease | 2.85e-22 | 2 |
syndrome | 4.53e-12 | 1 |
anemia | 5.62e-12 | 1 |
cardiovascular system disease | 1.26e-11 | 4 |
organ system cancer | 4.88e-11 | 137 |
cancer | 7.97e-08 | 235 |
disease of cellular proliferation | 1.30e-07 | 239 |