FFCP PHASE1:Hg19::chr10:127684632..127684655,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:127684632..127684655,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr10:127684632..127684655,+ | |description=CAGE_peak_at_chr10:127684632..127684655,+ | ||
|id=chr10:127684632..127684655,+ | |id=chr10:127684632..127684655,+ | ||
|ontology_enrichment_celltype=CL:0000080!7.96e-15!6 | |ontology_enrichment_celltype=CL:0000080!7.96e-15!6 | ||
|ontology_enrichment_celltype_v019=CL:0000815;2.05e-15;2!CL:0000792;2.05e-15;2!CL:0002677;2.05e-15;2!CL:0000898;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.37e-15,2;CL:0000792,2.37e-15,2;CL:0002677,2.37e-15,2;CL:0000898,1.09e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!8.95e-11!1;DOID:0060061!8.95e-11!1;DOID:8691!8.95e-11!1 | |ontology_enrichment_disease=DOID:0060060!8.95e-11!1;DOID:0060061!8.95e-11!1;DOID:8691!8.95e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.37e-29;1!DOID:0060061;2.37e-29;1!DOID:8691;2.37e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.78e-29,1;DOID:0060061,1.78e-29,1;DOID:8691,1.78e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.88e-12!7;UBERON:0001831!1.57e-10!1;UBERON:0001567!1.57e-10!1;UBERON:0008801!1.57e-10!1;UBERON:0002370!1.12e-09!4;UBERON:0005058!1.12e-09!4;UBERON:0009113!1.12e-09!4;UBERON:0003295!1.12e-09!4;UBERON:0005562!1.12e-09!4;UBERON:0002331!4.21e-09!10;UBERON:0000358!4.21e-09!10;UBERON:0000307!4.21e-09!10;UBERON:0000091!4.21e-09!10;UBERON:0000087!4.21e-09!10;UBERON:0007806!4.21e-09!10;UBERON:0008780!4.21e-09!10;UBERON:0005728!4.21e-09!10;UBERON:0003408!1.48e-08!10;UBERON:0001042!1.74e-08!10;UBERON:0009145!1.74e-08!10;UBERON:0006562!9.25e-08!11;UBERON:0003351!9.81e-07!6 | |ontology_enrichment_uberon=UBERON:0004177!7.88e-12!7;UBERON:0001831!1.57e-10!1;UBERON:0001567!1.57e-10!1;UBERON:0008801!1.57e-10!1;UBERON:0002370!1.12e-09!4;UBERON:0005058!1.12e-09!4;UBERON:0009113!1.12e-09!4;UBERON:0003295!1.12e-09!4;UBERON:0005562!1.12e-09!4;UBERON:0002331!4.21e-09!10;UBERON:0000358!4.21e-09!10;UBERON:0000307!4.21e-09!10;UBERON:0000091!4.21e-09!10;UBERON:0000087!4.21e-09!10;UBERON:0007806!4.21e-09!10;UBERON:0008780!4.21e-09!10;UBERON:0005728!4.21e-09!10;UBERON:0003408!1.48e-08!10;UBERON:0001042!1.74e-08!10;UBERON:0009145!1.74e-08!10;UBERON:0006562!9.25e-08!11;UBERON:0003351!9.81e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.55e-26;10!UBERON:0000178;7.82e-18;15!UBERON:0000179;7.82e-18;15!UBERON:0000463;7.82e-18;15!UBERON:0000478;1.97e-11;24!UBERON:0002390;7.89e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.55e-26,10;UBERON:0000358,2.55e-26,10;UBERON:0000307,2.55e-26,10;UBERON:0000091,2.55e-26,10;UBERON:0000087,2.55e-26,10;UBERON:0007010,2.55e-26,10;UBERON:0007806,2.55e-26,10;UBERON:0008780,2.55e-26,10;UBERON:0005728,2.55e-26,10;UBERON:0000178,7.82e-18,15;UBERON:0000179,7.82e-18,15;UBERON:0000463,7.82e-18,15;UBERON:0000478,1.97e-11,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,6.18672405697158,6.42448294292501,5.68688113906533,0.512365278902701,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8608451472249,13.9627251009548,13.4704314862037,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79957145906762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,6.18672405697158,6.42448294292501,5.68688113906533,0.512365278902701,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8608451472249,13.9627251009548,13.4704314862037,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79957145906762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:127684632..127684655,+ | |short_description=p@chr10:127684632..127684655,+ | ||
}} | }} |
Latest revision as of 11:28, 23 July 2015
Short description: | p@chr10:127684632..127684655, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:127684632..127684655, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.37e-15 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.37e-15 | 2 |
naive regulatory T cell | 2.37e-15 | 2 |
naive T cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.55e-26 | 10 |
blastocyst | 2.55e-26 | 10 |
blastula | 2.55e-26 | 10 |
bilaminar disc | 2.55e-26 | 10 |
inner cell mass | 2.55e-26 | 10 |
cleaving embryo | 2.55e-26 | 10 |
connecting stalk | 2.55e-26 | 10 |
inner cell mass derived epiblast | 2.55e-26 | 10 |
extraembryonic mesoderm | 2.55e-26 | 10 |
blood | 7.82e-18 | 15 |
haemolymphatic fluid | 7.82e-18 | 15 |
organism substance | 7.82e-18 | 15 |
extraembryonic structure | 1.97e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.78e-29 | 1 |
cutaneous T cell lymphoma | 1.78e-29 | 1 |
mycosis fungoides | 1.78e-29 | 1 |