FFCP PHASE1:Hg19::chr10:126405410..126405457,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126405410..126405457,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_at_chr10:126405410..126405457,- | |description=CAGE_peak_at_chr10:126405410..126405457,- | ||
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|ontology_enrichment_celltype=CL:0000946!4.11e-08!1;CL:0000786!4.11e-08!1;CL:0000980!4.11e-08!1 | |ontology_enrichment_celltype=CL:0000946!4.11e-08!1;CL:0000786!4.11e-08!1;CL:0000980!4.11e-08!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.00e-18;3 | |ontology_enrichment_development_v019=UBERON:0003056;8.00e-18;3 | ||
|ontology_enrichment_disease=DOID:178!2.17e-08!1;DOID:326!2.17e-08!1;DOID:3978!2.17e-08!1;DOID:3394!2.17e-08!1;DOID:5844!2.17e-08!1 | |ontology_enrichment_disease=DOID:178!2.17e-08!1;DOID:326!2.17e-08!1;DOID:3978!2.17e-08!1;DOID:3394!2.17e-08!1;DOID:5844!2.17e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.07e-15!2;UBERON:0002757!1.07e-15!2;UBERON:0010134!1.07e-15!2;UBERON:0002784!1.07e-15!2;UBERON:0005408!1.07e-15!2;UBERON:0001899!1.07e-15!2;UBERON:0001301!2.69e-08!1;UBERON:0003296!2.79e-08!4;UBERON:0010133!2.79e-08!4 | |ontology_enrichment_uberon=UBERON:0001905!1.07e-15!2;UBERON:0002757!1.07e-15!2;UBERON:0010134!1.07e-15!2;UBERON:0002784!1.07e-15!2;UBERON:0005408!1.07e-15!2;UBERON:0001899!1.07e-15!2;UBERON:0001301!2.69e-08!1;UBERON:0003296!2.79e-08!4;UBERON:0010133!2.79e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.21e-98;2!UBERON:0002757;1.21e-98;2!UBERON:0010134;1.21e-98;2!UBERON:0005408;1.21e-98;2!UBERON:0001899;1.21e-98;2!UBERON:0003296;4.53e-50;4!UBERON:0010133;4.53e-50;4!UBERON:0002784;4.53e-50;4!UBERON:0001894;3.40e-29;7!UBERON:0000966;2.94e-11;5!UBERON:0005388;2.94e-11;5!UBERON:0001802;2.94e-11;5!UBERON:0000970;5.85e-11;20!UBERON:0002104;1.73e-10;21!UBERON:0000020;1.14e-09;23!UBERON:0001032;2.61e-09;24!UBERON:0004456;2.61e-09;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.21e-98;2!UBERON:0002757;1.21e-98;2!UBERON:0010134;1.21e-98;2!UBERON:0005408;1.21e-98;2!UBERON:0001899;1.21e-98;2!UBERON:0003296;4.53e-50;4!UBERON:0010133;4.53e-50;4!UBERON:0002784;4.53e-50;4!UBERON:0001894;3.40e-29;7!UBERON:0000966;2.94e-11;5!UBERON:0005388;2.94e-11;5!UBERON:0001802;2.94e-11;5!UBERON:0000970;5.85e-11;20!UBERON:0002104;1.73e-10;21!UBERON:0000020;1.14e-09;23!UBERON:0001032;2.61e-09;24!UBERON:0004456;2.61e-09;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.38e-99,2;UBERON:0002757,9.38e-99,2;UBERON:0010134,9.38e-99,2;UBERON:0005408,9.38e-99,2;UBERON:0001899,9.38e-99,2;UBERON:0003296,4.00e-50,4;UBERON:0010133,4.00e-50,4;UBERON:0002784,4.00e-50,4;UBERON:0001894,3.16e-29,7;UBERON:0006222,3.16e-29,7;UBERON:0000970,1.77e-10,21;UBERON:0002104,1.77e-10,21;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0000020,2.67e-09,24;UBERON:0001032,2.67e-09,24;UBERON:0004456,2.67e-09,24;UBERON:0003056,4.28e-08,61 | |||
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|short_description=p@chr10:126405410..126405457,- | |short_description=p@chr10:126405410..126405457,- | ||
}} | }} |
Latest revision as of 11:23, 23 July 2015
Short description: | p@chr10:126405410..126405457, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126405410..126405457, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 9.38e-99 | 2 |
regional part of epithalamus | 9.38e-99 | 2 |
secretory circumventricular organ | 9.38e-99 | 2 |
circumventricular organ | 9.38e-99 | 2 |
epithalamus | 9.38e-99 | 2 |
gland of diencephalon | 4.00e-50 | 4 |
neuroendocrine gland | 4.00e-50 | 4 |
regional part of diencephalon | 4.00e-50 | 4 |
diencephalon | 3.16e-29 | 7 |
future diencephalon | 3.16e-29 | 7 |
eye | 1.77e-10 | 21 |
visual system | 1.77e-10 | 21 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
sense organ | 2.67e-09 | 24 |
sensory system | 2.67e-09 | 24 |
entire sense organ system | 2.67e-09 | 24 |
pre-chordal neural plate | 4.28e-08 | 61 |