FFCP PHASE1:Hg19::chr10:126021315..126021345,+: Difference between revisions
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|id=chr10:126021315..126021345,+
|short_description=p@chr10:126021315..126021345,+
|description=CAGE_peak_at_chr10:126021315..126021345,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:126021315..126021345,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:126021315..126021345,+ | |||
|id=chr10:126021315..126021345,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.04e-101!42;CL:0000860!1.68e-94!45;CL:0002194!4.23e-69!63;CL:0000576!4.23e-69!63;CL:0000040!4.23e-69!63;CL:0000559!4.23e-69!63;CL:0002009!8.32e-67!65;CL:0000766!3.01e-64!76;CL:0000839!1.23e-61!70;CL:0000557!1.09e-60!71;CL:0000763!1.35e-41!112;CL:0000049!1.35e-41!112;CL:0002087!2.80e-41!119;CL:0000738!8.60e-39!140;CL:0002031!3.90e-32!124;CL:0000037!2.75e-30!172;CL:0000566!2.75e-30!172;CL:0000988!3.09e-28!182;CL:0002032!4.19e-26!165;CL:0000837!4.19e-26!165;CL:0000134!8.73e-16!358;CL:0002320!2.45e-15!365;CL:0000842!1.62e-14!3;CL:0000219!9.33e-14!390;CL:0000048!7.31e-12!430;CL:0000723!1.36e-11!436;CL:0000034!3.03e-11!444;CL:0000224!5.04e-11!4;CL:0002393!6.47e-09!9;CL:0002397!6.47e-09!9;CL:0000080!1.65e-07!6;CL:0000767!2.59e-07!3;CL:0000063!8.24e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.28e-85;33!CL:0002057;6.28e-85;33!CL:0000473;6.03e-58;39!CL:0000234;6.03e-58;39!CL:0000576;4.07e-50;48!CL:0000766;1.71e-29;69!CL:0002393;2.23e-14;6!CL:0002397;2.23e-14;6!CL:0002087;9.02e-13;104!CL:0000763;3.34e-11;100!CL:0000738;7.31e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.70e-96,42;CL:0002057,1.70e-96,42;CL:0000473,3.97e-84,48;CL:0000234,3.97e-84,48;CL:0002194,8.43e-67,59;CL:0000576,8.43e-67,59;CL:0000040,8.43e-67,59;CL:0000559,8.43e-67,59;CL:0002009,1.45e-64,61;CL:0000839,1.48e-59,66;CL:0000557,1.22e-58,67;CL:0000766,1.89e-54,72;CL:0000763,1.35e-35,108;CL:0000049,1.35e-35,108;CL:0002087,2.77e-33,115;CL:0002031,8.50e-32,120;CL:0000738,9.17e-28,136;CL:0002032,4.74e-23,161;CL:0000837,4.74e-23,161;CL:0000037,5.58e-22,168;CL:0000988,1.00e-20,177;CL:0002393,8.79e-10,9;CL:0002397,8.79e-10,9;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;4.98e-67;42!CL:0000049;4.21e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.59e-57!80;UBERON:0001474!1.84e-52!86;UBERON:0002390!2.23e-52!102;UBERON:0003061!2.23e-52!102;UBERON:0002193!4.03e-47!112;UBERON:0004765!9.70e-47!101;UBERON:0001434!9.70e-47!101;UBERON:0002405!1.18e-37!115;UBERON:0002204!1.16e-25!167;UBERON:0003081!3.47e-24!216;UBERON:0002384!1.00e-14!375;UBERON:0000926!2.36e-09!448;UBERON:0004120!2.36e-09!448;UBERON:0006603!2.36e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-51,76;UBERON:0001474,1.41e-47,82;UBERON:0004765,3.66e-43,90;UBERON:0002405,1.06e-41,93;UBERON:0002390,1.84e-39,98;UBERON:0003061,1.84e-39,98;UBERON:0001434,1.26e-38,100;UBERON:0002193,1.35e-35,108;UBERON:0002204,3.97e-22,167;UBERON:0003081,1.01e-17,203;UBERON:0000926,2.18e-10,315;UBERON:0004120,2.18e-10,315;UBERON:0006603,2.18e-10,315;UBERON:0002384,2.34e-08,371 | |||
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|short_description=p@chr10:126021315..126021345,+ | |||
}} | }} |
Latest revision as of 11:20, 23 July 2015
Short description: | p@chr10:126021315..126021345, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126021315..126021345, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.70e-96 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.70e-96 | 42 |
defensive cell | 3.97e-84 | 48 |
phagocyte | 3.97e-84 | 48 |
monopoietic cell | 8.43e-67 | 59 |
monocyte | 8.43e-67 | 59 |
monoblast | 8.43e-67 | 59 |
promonocyte | 8.43e-67 | 59 |
macrophage dendritic cell progenitor | 1.45e-64 | 61 |
myeloid lineage restricted progenitor cell | 1.48e-59 | 66 |
granulocyte monocyte progenitor cell | 1.22e-58 | 67 |
myeloid leukocyte | 1.89e-54 | 72 |
myeloid cell | 1.35e-35 | 108 |
common myeloid progenitor | 1.35e-35 | 108 |
nongranular leukocyte | 2.77e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 8.50e-32 | 120 |
leukocyte | 9.17e-28 | 136 |
hematopoietic oligopotent progenitor cell | 4.74e-23 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-23 | 161 |
hematopoietic stem cell | 5.58e-22 | 168 |
hematopoietic cell | 1.00e-20 | 177 |
intermediate monocyte | 8.79e-10 | 9 |
CD14-positive, CD16-positive monocyte | 8.79e-10 | 9 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
motile cell | 7.44e-08 | 386 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-51 | 76 |
bone element | 1.41e-47 | 82 |
skeletal element | 3.66e-43 | 90 |
immune system | 1.06e-41 | 93 |
hematopoietic system | 1.84e-39 | 98 |
blood island | 1.84e-39 | 98 |
skeletal system | 1.26e-38 | 100 |
hemolymphoid system | 1.35e-35 | 108 |
musculoskeletal system | 3.97e-22 | 167 |
lateral plate mesoderm | 1.01e-17 | 203 |
mesoderm | 2.18e-10 | 315 |
mesoderm-derived structure | 2.18e-10 | 315 |
presumptive mesoderm | 2.18e-10 | 315 |
connective tissue | 2.34e-08 | 371 |