FFCP PHASE1:Hg19::chr10:125978927..125978938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125978927..125978938,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:125978927..125978938,- | |description=CAGE_peak_at_chr10:125978927..125978938,- | ||
|id=chr10:125978927..125978938,- | |id=chr10:125978927..125978938,- | ||
|ontology_enrichment_celltype=CL:0002057!1.54e-147!42;CL:0000860!3.23e-137!45;CL:0002194!2.66e-94!63;CL:0000576!2.66e-94!63;CL:0000040!2.66e-94!63;CL:0000559!2.66e-94!63;CL:0002009!3.21e-91!65;CL:0000766!5.83e-91!76;CL:0000839!2.83e-84!70;CL:0000557!5.30e-83!71;CL:0000763!1.47e-59!112;CL:0000049!1.47e-59!112;CL:0002087!1.66e-55!119;CL:0000738!2.90e-54!140;CL:0002031!1.22e-44!124;CL:0000037!8.62e-43!172;CL:0000566!8.62e-43!172;CL:0000988!5.02e-40!182;CL:0002032!4.40e-38!165;CL:0000837!4.40e-38!165;CL:0000134!1.69e-16!358;CL:0002320!4.98e-16!365;CL:0000219!2.28e-14!390;CL:0000842!4.93e-14!3;CL:0002393!2.00e-12!9;CL:0002397!2.00e-12!9;CL:0000048!2.22e-12!430;CL:0000723!4.26e-12!436;CL:0000034!9.89e-12!444;CL:0000224!1.18e-10!4;CL:0000080!2.94e-07!6;CL:0000767!3.95e-07!3;CL:0000063!4.47e-07!578 | |ontology_enrichment_celltype=CL:0002057!1.54e-147!42;CL:0000860!3.23e-137!45;CL:0002194!2.66e-94!63;CL:0000576!2.66e-94!63;CL:0000040!2.66e-94!63;CL:0000559!2.66e-94!63;CL:0002009!3.21e-91!65;CL:0000766!5.83e-91!76;CL:0000839!2.83e-84!70;CL:0000557!5.30e-83!71;CL:0000763!1.47e-59!112;CL:0000049!1.47e-59!112;CL:0002087!1.66e-55!119;CL:0000738!2.90e-54!140;CL:0002031!1.22e-44!124;CL:0000037!8.62e-43!172;CL:0000566!8.62e-43!172;CL:0000988!5.02e-40!182;CL:0002032!4.40e-38!165;CL:0000837!4.40e-38!165;CL:0000134!1.69e-16!358;CL:0002320!4.98e-16!365;CL:0000219!2.28e-14!390;CL:0000842!4.93e-14!3;CL:0002393!2.00e-12!9;CL:0002397!2.00e-12!9;CL:0000048!2.22e-12!430;CL:0000723!4.26e-12!436;CL:0000034!9.89e-12!444;CL:0000224!1.18e-10!4;CL:0000080!2.94e-07!6;CL:0000767!3.95e-07!3;CL:0000063!4.47e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.36e-114;33!CL:0002057;3.36e-114;33!CL:0000473;2.21e-78;39!CL:0000234;2.21e-78;39!CL:0000576;5.61e-59;48!CL:0000766;2.98e-36;69!CL:0000763;5.37e-17;100!CL:0002087;1.77e-16;104!CL:0000738;7.01e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.68e-115,42;CL:0002057,3.68e-115,42;CL:0000473,2.72e-100,48;CL:0000234,2.72e-100,48;CL:0002194,1.82e-79,59;CL:0000576,1.82e-79,59;CL:0000040,1.82e-79,59;CL:0000559,1.82e-79,59;CL:0002009,8.87e-77,61;CL:0000839,9.27e-71,66;CL:0000766,7.37e-70,72;CL:0000557,1.16e-69,67;CL:0000763,1.76e-45,108;CL:0000049,1.76e-45,108;CL:0002087,3.40e-39,115;CL:0002031,2.08e-37,120;CL:0000738,2.33e-35,136;CL:0002032,2.86e-29,161;CL:0000837,2.86e-29,161;CL:0000037,6.91e-28,168;CL:0000988,2.88e-26,177;CL:0000134,5.00e-11,354;CL:0002320,9.96e-11,361;CL:0000219,1.13e-09,386;CL:0000048,2.22e-08,427;CL:0000723,3.36e-08,433;CL:0000034,5.71e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.16e-83;42!CL:0000049;2.43e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.91e-73!80;UBERON:0001474!2.07e-67!86;UBERON:0002390!6.28e-66!102;UBERON:0003061!6.28e-66!102;UBERON:0002193!2.03e-59!112;UBERON:0004765!2.13e-56!101;UBERON:0001434!2.13e-56!101;UBERON:0002405!1.10e-48!115;UBERON:0002204!2.83e-31!167;UBERON:0003081!3.17e-27!216;UBERON:0002384!2.19e-15!375;UBERON:0000926!5.17e-09!448;UBERON:0004120!5.17e-09!448;UBERON:0006603!5.17e-09!448 | |ontology_enrichment_uberon=UBERON:0002371!5.91e-73!80;UBERON:0001474!2.07e-67!86;UBERON:0002390!6.28e-66!102;UBERON:0003061!6.28e-66!102;UBERON:0002193!2.03e-59!112;UBERON:0004765!2.13e-56!101;UBERON:0001434!2.13e-56!101;UBERON:0002405!1.10e-48!115;UBERON:0002204!2.83e-31!167;UBERON:0003081!3.17e-27!216;UBERON:0002384!2.19e-15!375;UBERON:0000926!5.17e-09!448;UBERON:0004120!5.17e-09!448;UBERON:0006603!5.17e-09!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.61e-61,76;UBERON:0001474,2.30e-56,82;UBERON:0004765,4.63e-51,90;UBERON:0002405,2.64e-49,93;UBERON:0002390,1.30e-46,98;UBERON:0003061,1.30e-46,98;UBERON:0001434,1.30e-45,100;UBERON:0002193,5.71e-42,108;UBERON:0002204,8.51e-26,167;UBERON:0003081,1.66e-20,203;UBERON:0000926,1.03e-11,315;UBERON:0004120,1.03e-11,315;UBERON:0006603,1.03e-11,315;UBERON:0002384,2.55e-10,371 | |||
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|short_description=p@chr10:125978927..125978938,- | |short_description=p@chr10:125978927..125978938,- | ||
}} | }} |
Latest revision as of 11:20, 23 July 2015
Short description: | p@chr10:125978927..125978938, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125978927..125978938, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.68e-115 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.68e-115 | 42 |
defensive cell | 2.72e-100 | 48 |
phagocyte | 2.72e-100 | 48 |
monopoietic cell | 1.82e-79 | 59 |
monocyte | 1.82e-79 | 59 |
monoblast | 1.82e-79 | 59 |
promonocyte | 1.82e-79 | 59 |
macrophage dendritic cell progenitor | 8.87e-77 | 61 |
myeloid lineage restricted progenitor cell | 9.27e-71 | 66 |
myeloid leukocyte | 7.37e-70 | 72 |
granulocyte monocyte progenitor cell | 1.16e-69 | 67 |
myeloid cell | 1.76e-45 | 108 |
common myeloid progenitor | 1.76e-45 | 108 |
nongranular leukocyte | 3.40e-39 | 115 |
hematopoietic lineage restricted progenitor cell | 2.08e-37 | 120 |
leukocyte | 2.33e-35 | 136 |
hematopoietic oligopotent progenitor cell | 2.86e-29 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-29 | 161 |
hematopoietic stem cell | 6.91e-28 | 168 |
hematopoietic cell | 2.88e-26 | 177 |
mesenchymal cell | 5.00e-11 | 354 |
connective tissue cell | 9.96e-11 | 361 |
motile cell | 1.13e-09 | 386 |
multi fate stem cell | 2.22e-08 | 427 |
somatic stem cell | 3.36e-08 | 433 |
stem cell | 5.71e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.61e-61 | 76 |
bone element | 2.30e-56 | 82 |
skeletal element | 4.63e-51 | 90 |
immune system | 2.64e-49 | 93 |
hematopoietic system | 1.30e-46 | 98 |
blood island | 1.30e-46 | 98 |
skeletal system | 1.30e-45 | 100 |
hemolymphoid system | 5.71e-42 | 108 |
musculoskeletal system | 8.51e-26 | 167 |
lateral plate mesoderm | 1.66e-20 | 203 |
mesoderm | 1.03e-11 | 315 |
mesoderm-derived structure | 1.03e-11 | 315 |
presumptive mesoderm | 1.03e-11 | 315 |
connective tissue | 2.55e-10 | 371 |