FFCP PHASE1:Hg19::chr10:125013755..125013768,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125013755..125013768,+ | |||
|description=CAGE_peak_at_chr10:125013755..125013768,+ | |description=CAGE_peak_at_chr10:125013755..125013768,+ | ||
|id=chr10:125013755..125013768,+ | |id=chr10:125013755..125013768,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;2.28e-10;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.13e-15!41;UBERON:0001890!3.13e-15!41;UBERON:0006240!3.13e-15!41;UBERON:0003080!1.28e-14!42;UBERON:0001049!4.44e-14!57;UBERON:0005068!4.44e-14!57;UBERON:0006241!4.44e-14!57;UBERON:0007135!4.44e-14!57;UBERON:0000955!6.10e-13!69;UBERON:0006238!6.10e-13!69;UBERON:0000073!6.66e-13!94;UBERON:0001016!6.66e-13!94;UBERON:0001017!2.22e-12!82;UBERON:0005743!6.70e-12!86;UBERON:0007023!7.69e-12!115;UBERON:0001869!1.93e-11!32;UBERON:0002616!2.83e-11!59;UBERON:0001893!3.11e-11!34;UBERON:0000956!4.97e-11!25;UBERON:0000203!4.97e-11!25;UBERON:0002791!5.73e-11!33;UBERON:0002020!2.01e-10!34;UBERON:0003528!2.01e-10!34;UBERON:0002619!3.09e-09!22;UBERON:0001950!4.08e-09!20;UBERON:0002346!1.23e-08!90;UBERON:0003075!1.85e-08!86;UBERON:0007284!1.85e-08!86;UBERON:0003056!2.16e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.49e-21;4!UBERON:0010133;3.49e-21;4!UBERON:0000007;1.97e-19;2!UBERON:0001894;2.31e-12;7!UBERON:0001874;2.28e-10;1!UBERON:0002780;3.55e-09;41!UBERON:0001890;3.55e-09;41!UBERON:0000073;1.50e-08;53!UBERON:0002616;1.50e-08;53!UBERON:0000955;4.67e-08;68!UBERON:0001950;3.79e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.06e-21,4;UBERON:0010133,3.06e-21,4;UBERON:0000007,9.38e-20,2;UBERON:0002780,7.73e-13,41;UBERON:0001890,7.73e-13,41;UBERON:0003080,7.73e-13,41;UBERON:0006240,7.73e-13,41;UBERON:0001894,2.14e-12,7;UBERON:0006222,2.14e-12,7;UBERON:0000073,2.46e-12,53;UBERON:0002616,2.46e-12,53;UBERON:0001049,1.28e-11,56;UBERON:0005068,1.28e-11,56;UBERON:0006241,1.28e-11,56;UBERON:0007135,1.28e-11,56;UBERON:0000955,1.80e-11,68;UBERON:0006238,1.80e-11,68;UBERON:0001874,2.74e-10,1;UBERON:0001016,3.50e-10,89;UBERON:0001017,1.93e-09,81;UBERON:0003056,2.25e-08,61;UBERON:0003075,1.38e-07,82;UBERON:0007284,1.38e-07,82;UBERON:0002346,3.52e-07,86;UBERON:0001950,4.12e-07,20 | |||
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| ||
|short_description=p@chr10:125013755..125013768,+ | |short_description=p@chr10:125013755..125013768,+ | ||
}} | }} |
Latest revision as of 11:17, 23 July 2015
Short description: | p@chr10:125013755..125013768, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125013755..125013768, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 3.06e-21 | 4 |
neuroendocrine gland | 3.06e-21 | 4 |
pituitary gland | 9.38e-20 | 2 |
regional part of forebrain | 7.73e-13 | 41 |
forebrain | 7.73e-13 | 41 |
anterior neural tube | 7.73e-13 | 41 |
future forebrain | 7.73e-13 | 41 |
diencephalon | 2.14e-12 | 7 |
future diencephalon | 2.14e-12 | 7 |
regional part of nervous system | 2.46e-12 | 53 |
regional part of brain | 2.46e-12 | 53 |
neural tube | 1.28e-11 | 56 |
neural rod | 1.28e-11 | 56 |
future spinal cord | 1.28e-11 | 56 |
neural keel | 1.28e-11 | 56 |
brain | 1.80e-11 | 68 |
future brain | 1.80e-11 | 68 |
putamen | 2.74e-10 | 1 |
nervous system | 3.50e-10 | 89 |
central nervous system | 1.93e-09 | 81 |
pre-chordal neural plate | 2.25e-08 | 61 |
neural plate | 1.38e-07 | 82 |
presumptive neural plate | 1.38e-07 | 82 |
neurectoderm | 3.52e-07 | 86 |
neocortex | 4.12e-07 | 20 |