FFCP PHASE1:Hg19::chr10:120839809..120839816,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:120839809..120839816,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:120839809..120839816,+ | |description=CAGE_peak_at_chr10:120839809..120839816,+ | ||
|id=chr10:120839809..120839816,+ | |id=chr10:120839809..120839816,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.54e-46!42;CL:0000860!6.28e-43!45;CL:0002009!4.05e-34!65;CL:0002194!4.78e-32!63;CL:0000576!4.78e-32!63;CL:0000040!4.78e-32!63;CL:0000559!4.78e-32!63;CL:0000557!7.38e-31!71;CL:0000766!1.26e-28!76;CL:0000839!2.05e-28!70;CL:0000763!8.59e-20!112;CL:0000049!8.59e-20!112;CL:0000738!5.40e-18!140;CL:0002087!1.73e-16!119;CL:0002031!1.15e-15!124;CL:0000037!5.15e-15!172;CL:0000566!5.15e-15!172;CL:0000988!6.97e-14!182;CL:0002032!7.80e-12!165;CL:0000837!7.80e-12!165 | |ontology_enrichment_celltype=CL:0002057!2.54e-46!42;CL:0000860!6.28e-43!45;CL:0002009!4.05e-34!65;CL:0002194!4.78e-32!63;CL:0000576!4.78e-32!63;CL:0000040!4.78e-32!63;CL:0000559!4.78e-32!63;CL:0000557!7.38e-31!71;CL:0000766!1.26e-28!76;CL:0000839!2.05e-28!70;CL:0000763!8.59e-20!112;CL:0000049!8.59e-20!112;CL:0000738!5.40e-18!140;CL:0002087!1.73e-16!119;CL:0002031!1.15e-15!124;CL:0000037!5.15e-15!172;CL:0000566!5.15e-15!172;CL:0000988!6.97e-14!182;CL:0002032!7.80e-12!165;CL:0000837!7.80e-12!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.70e-40;33!CL:0002057;4.70e-40;33!CL:0000473;2.57e-34;39!CL:0000234;2.57e-34;39!CL:0000576;3.39e-17;48!CL:0000766;1.16e-16;69!CL:0000763;1.14e-11;100!CL:0000771;7.21e-09;2!CL:0002087;8.90e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.68e-37,48;CL:0000234,1.68e-37,48;CL:0000860,1.53e-35,42;CL:0002057,1.53e-35,42;CL:0002194,7.71e-30,59;CL:0000576,7.71e-30,59;CL:0000040,7.71e-30,59;CL:0000559,7.71e-30,59;CL:0000766,4.50e-29,72;CL:0002009,7.53e-29,61;CL:0000839,1.24e-26,66;CL:0000557,3.15e-26,67;CL:0000763,3.73e-19,108;CL:0000049,3.73e-19,108;CL:0000738,5.00e-15,136;CL:0002087,5.52e-15,115;CL:0002031,2.53e-14,120;CL:0002032,1.54e-12,161;CL:0000837,1.54e-12,161;CL:0000037,5.68e-12,168;CL:0000988,2.61e-11,177;CL:0000771,6.94e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.64e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.35e-29!80;UBERON:0001474!3.40e-27!86;UBERON:0002390!2.64e-24!102;UBERON:0003061!2.64e-24!102;UBERON:0004765!1.97e-22!101;UBERON:0001434!1.97e-22!101;UBERON:0002193!1.12e-21!112;UBERON:0002405!4.23e-19!115;UBERON:0002204!1.33e-11!167;UBERON:0003081!1.02e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.65e-23,76;UBERON:0001474,2.51e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,1.01e-18,93;UBERON:0002390,9.98e-18,98;UBERON:0003061,9.98e-18,98;UBERON:0001434,2.34e-17,100;UBERON:0002193,5.19e-16,108;UBERON:0002204,5.12e-10,167;UBERON:0003081,4.78e-08,203 | |||
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|short_description=p@chr10:120839809..120839816,+ | |short_description=p@chr10:120839809..120839816,+ | ||
}} | }} |
Latest revision as of 10:57, 23 July 2015
Short description: | p@chr10:120839809..120839816, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:120839809..120839816, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.68e-37 | 48 |
phagocyte | 1.68e-37 | 48 |
classical monocyte | 1.53e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-35 | 42 |
monopoietic cell | 7.71e-30 | 59 |
monocyte | 7.71e-30 | 59 |
monoblast | 7.71e-30 | 59 |
promonocyte | 7.71e-30 | 59 |
myeloid leukocyte | 4.50e-29 | 72 |
macrophage dendritic cell progenitor | 7.53e-29 | 61 |
myeloid lineage restricted progenitor cell | 1.24e-26 | 66 |
granulocyte monocyte progenitor cell | 3.15e-26 | 67 |
myeloid cell | 3.73e-19 | 108 |
common myeloid progenitor | 3.73e-19 | 108 |
leukocyte | 5.00e-15 | 136 |
nongranular leukocyte | 5.52e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.53e-14 | 120 |
hematopoietic oligopotent progenitor cell | 1.54e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-12 | 161 |
hematopoietic stem cell | 5.68e-12 | 168 |
hematopoietic cell | 2.61e-11 | 177 |
eosinophil | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.65e-23 | 76 |
bone element | 2.51e-21 | 82 |
skeletal element | 2.27e-19 | 90 |
immune system | 1.01e-18 | 93 |
hematopoietic system | 9.98e-18 | 98 |
blood island | 9.98e-18 | 98 |
skeletal system | 2.34e-17 | 100 |
hemolymphoid system | 5.19e-16 | 108 |
musculoskeletal system | 5.12e-10 | 167 |
lateral plate mesoderm | 4.78e-08 | 203 |