FFCP PHASE1:Hg19::chr10:111886180..111886216,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:111886180..111886216,+ | |||
|description=CAGE_peak_at_chr10:111886180..111886216,+ | |||
|id=chr10:111886180..111886216,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;4.14e-09;3!CL:0002127;5.28e-07;1!CL:0000911;5.28e-07;1!CL:0000814;5.28e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.69e-09,3;CL:0002127,6.49e-07,1;CL:0000914,6.49e-07,1;CL:0000911,6.49e-07,1;CL:0000814,6.49e-07,1;CL:0002042,6.49e-07,1;CL:0002039,6.49e-07,1;CL:0002040,6.49e-07,1;CL:0002041,6.49e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.85e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;5.28e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!8.33e-07!34;UBERON:0003528!8.33e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;1.11e-13;6!UBERON:0001876;2.41e-12;2!UBERON:0002619;1.76e-11;22!UBERON:0000349;8.45e-11;5!UBERON:0000956;4.69e-10;25!UBERON:0000203;4.69e-10;25!UBERON:0002791;6.77e-10;32!UBERON:0001950;1.94e-09;20!UBERON:0001893;4.38e-08;34!UBERON:0001869;5.60e-08;32!UBERON:0002079;1.85e-07;1!UBERON:0003528;3.82e-07;34!UBERON:0002020;3.82e-07;34!UBERON:0002038;5.28e-07;1!UBERON:0009661;5.28e-07;1!UBERON:0002950;5.28e-07;1!UBERON:0001891;5.28e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,7.08e-14,6;UBERON:0001876,1.21e-12,2;UBERON:0002619,1.05e-11,22;UBERON:0000349,4.22e-11,5;UBERON:0000956,2.98e-10,25;UBERON:0000203,2.98e-10,25;UBERON:0002791,4.04e-10,32;UBERON:0001950,1.36e-09,20;UBERON:0003528,1.79e-09,34;UBERON:0002020,1.79e-09,34;UBERON:0001893,1.79e-09,34;UBERON:0001049,2.16e-08,56;UBERON:0005068,2.16e-08,56;UBERON:0006241,2.16e-08,56;UBERON:0007135,2.16e-08,56;UBERON:0001869,6.94e-08,32;UBERON:0002780,1.07e-07,41;UBERON:0001890,1.07e-07,41;UBERON:0003080,1.07e-07,41;UBERON:0006240,1.07e-07,41;UBERON:0002079,2.23e-07,1;UBERON:0000073,3.41e-07,53;UBERON:0002616,3.41e-07,53 | |||
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| |||
|short_description=p@chr10:111886180..111886216,+ | |||
}} |
Latest revision as of 10:19, 23 July 2015
Short description: | p@chr10:111886180..111886216, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:111886180..111886216, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.69e-09 | 3 |
innate effector T cell | 6.49e-07 | 1 |
immature NK T cell | 6.49e-07 | 1 |
effector T cell | 6.49e-07 | 1 |
mature NK T cell | 6.49e-07 | 1 |
immature NK T cell stage IV | 6.49e-07 | 1 |
immature NK T cell stage I | 6.49e-07 | 1 |
immature NK T cell stage II | 6.49e-07 | 1 |
immature NK T cell stage III | 6.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 7.08e-14 | 6 |
amygdala | 1.21e-12 | 2 |
regional part of cerebral cortex | 1.05e-11 | 22 |
limbic system | 4.22e-11 | 5 |
cerebral cortex | 2.98e-10 | 25 |
pallium | 2.98e-10 | 25 |
regional part of telencephalon | 4.04e-10 | 32 |
neocortex | 1.36e-09 | 20 |
brain grey matter | 1.79e-09 | 34 |
gray matter | 1.79e-09 | 34 |
telencephalon | 1.79e-09 | 34 |
neural tube | 2.16e-08 | 56 |
neural rod | 2.16e-08 | 56 |
future spinal cord | 2.16e-08 | 56 |
neural keel | 2.16e-08 | 56 |
cerebral hemisphere | 6.94e-08 | 32 |
regional part of forebrain | 1.07e-07 | 41 |
forebrain | 1.07e-07 | 41 |
anterior neural tube | 1.07e-07 | 41 |
future forebrain | 1.07e-07 | 41 |
left cardiac atrium | 2.23e-07 | 1 |
regional part of nervous system | 3.41e-07 | 53 |
regional part of brain | 3.41e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.40e-07 | 1 |