FFCP PHASE1:Hg19::chr10:109856810..109856815,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:109856810..109856815,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_at_chr10:109856810..109856815,+ | |||
|id=chr10:109856810..109856815,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.00e-21!12;CL:0000417!9.00e-21!12;CL:0000668!9.00e-21!12;CL:0000414!9.00e-21!12;CL:0000412!9.00e-21!12;CL:0000182!9.00e-21!12;CL:0000223!4.23e-09!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.28e-19;11!UBERON:0009497;2.43e-16;13!UBERON:0001041;1.10e-07;30!UBERON:0003104;1.10e-07;31 | |||
|ontology_enrichment_disease=DOID:4074!7.49e-09!2;DOID:4905!7.49e-09!2;DOID:3498!7.49e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.53e-29!19;UBERON:0006925!5.53e-29!19;UBERON:0008836!5.53e-29!19;UBERON:0008835!5.07e-25!22;UBERON:0003894!5.07e-25!22;UBERON:0009854!6.27e-24!23;UBERON:0007499!5.25e-22!25;UBERON:0009497!5.25e-22!25;UBERON:0000015!5.25e-22!25;UBERON:0002423!5.25e-22!25;UBERON:0006235!5.25e-22!25;UBERON:0004161!5.25e-22!25;UBERON:0005057!3.72e-21!26;UBERON:0009856!3.72e-21!26;UBERON:0002365!1.01e-17!31;UBERON:0002330!1.01e-17!31;UBERON:0000949!2.57e-16!45;UBERON:0002368!1.12e-15!35;UBERON:0003929!1.49e-13!54;UBERON:0005172!2.94e-13!55;UBERON:0005173!2.94e-13!55;UBERON:0002417!6.54e-12!61;UBERON:0000916!6.54e-12!61;UBERON:0002530!3.33e-09!59;UBERON:0005911!9.16e-09!82;UBERON:0004921!9.65e-09!129;UBERON:0004185!9.65e-09!129;UBERON:0005177!1.59e-08!107;UBERON:0001041!3.11e-07!98;UBERON:0001007!3.91e-07!155;UBERON:0001555!3.91e-07!155;UBERON:0007026!3.91e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.84e-24;19!UBERON:0006925;2.84e-24;19!UBERON:0002423;1.05e-18;25!UBERON:0002365;6.05e-15;31!UBERON:0002330;6.05e-15;31!UBERON:0002368;4.92e-12;33!UBERON:0000949;4.04e-09;43!UBERON:0005172;5.11e-07;52!UBERON:0005173;5.11e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60 | |||
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|short_description=p@chr10:109856810..109856815,+ | |||
}} | }} |
Latest revision as of 10:14, 23 July 2015
Short description: | p@chr10:109856810..109856815, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:109856810..109856815, + |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 2.73e-24 | 19 |
digestive gland | 2.73e-24 | 19 |
liver bud | 2.73e-24 | 19 |
hepatic diverticulum | 3.99e-21 | 22 |
liver primordium | 3.99e-21 | 22 |
digestive tract diverticulum | 2.97e-20 | 23 |
epithelial sac | 1.02e-18 | 25 |
epithelium of foregut-midgut junction | 1.02e-18 | 25 |
anatomical boundary | 1.02e-18 | 25 |
hepatobiliary system | 1.02e-18 | 25 |
foregut-midgut junction | 1.02e-18 | 25 |
septum transversum | 1.02e-18 | 25 |
sac | 4.90e-18 | 26 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
endocrine gland | 1.18e-13 | 35 |
endocrine system | 7.94e-11 | 45 |
gut epithelium | 3.61e-09 | 54 |
abdomen element | 3.61e-09 | 54 |
abdominal segment element | 3.61e-09 | 54 |
gland | 1.83e-08 | 59 |
abdominal segment of trunk | 2.45e-08 | 60 |
abdomen | 2.45e-08 | 60 |