FFCP PHASE1:Hg19::chr10:105880202..105880239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105880202..105880239,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:105880202..105880239,+ | |description=CAGE_peak_at_chr10:105880202..105880239,+ | ||
|id=chr10:105880202..105880239,+ | |id=chr10:105880202..105880239,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.76e-67!42;CL:0000860!2.22e-62!45;CL:0002009!4.82e-51!65;CL:0000557!3.23e-46!71;CL:0000766!4.90e-46!76;CL:0002194!1.66e-45!63;CL:0000576!1.66e-45!63;CL:0000040!1.66e-45!63;CL:0000559!1.66e-45!63;CL:0000738!1.67e-42!140;CL:0000839!2.22e-40!70;CL:0002087!9.99e-36!119;CL:0002031!7.23e-34!124;CL:0000763!1.23e-33!112;CL:0000049!1.23e-33!112;CL:0000037!4.18e-33!172;CL:0000566!4.18e-33!172;CL:0000988!7.69e-31!182;CL:0002032!6.60e-29!165;CL:0000837!6.60e-29!165;CL:0000767!1.35e-13!3;CL:0000134!2.07e-13!358;CL:0002320!5.48e-13!365;CL:0000219!1.70e-11!390;CL:0000034!9.68e-11!444;CL:0000048!1.68e-10!430;CL:0000723!3.11e-10!436;CL:0001014!1.59e-09!2;CL:0001016!1.59e-09!2;CL:0002393!2.87e-08!9;CL:0002397!2.87e-08!9;CL:0000840!5.16e-07!5;CL:0001029!5.16e-07!5;CL:0000842!6.37e-07!3;CL:0000784!9.60e-07!3 | |ontology_enrichment_celltype=CL:0002057!2.76e-67!42;CL:0000860!2.22e-62!45;CL:0002009!4.82e-51!65;CL:0000557!3.23e-46!71;CL:0000766!4.90e-46!76;CL:0002194!1.66e-45!63;CL:0000576!1.66e-45!63;CL:0000040!1.66e-45!63;CL:0000559!1.66e-45!63;CL:0000738!1.67e-42!140;CL:0000839!2.22e-40!70;CL:0002087!9.99e-36!119;CL:0002031!7.23e-34!124;CL:0000763!1.23e-33!112;CL:0000049!1.23e-33!112;CL:0000037!4.18e-33!172;CL:0000566!4.18e-33!172;CL:0000988!7.69e-31!182;CL:0002032!6.60e-29!165;CL:0000837!6.60e-29!165;CL:0000767!1.35e-13!3;CL:0000134!2.07e-13!358;CL:0002320!5.48e-13!365;CL:0000219!1.70e-11!390;CL:0000034!9.68e-11!444;CL:0000048!1.68e-10!430;CL:0000723!3.11e-10!436;CL:0001014!1.59e-09!2;CL:0001016!1.59e-09!2;CL:0002393!2.87e-08!9;CL:0002397!2.87e-08!9;CL:0000840!5.16e-07!5;CL:0001029!5.16e-07!5;CL:0000842!6.37e-07!3;CL:0000784!9.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.28e-74;33!CL:0002057;7.28e-74;33!CL:0000473;6.29e-51;39!CL:0000234;6.29e-51;39!CL:0000576;1.49e-41;48!CL:0000766;2.63e-26;69!CL:0002087;3.57e-18;104!CL:0002393;3.36e-13;6!CL:0002397;3.36e-13;6!CL:0000763;1.36e-12;100!CL:0000226;1.08e-11;3!CL:0000842;1.08e-11;3!CL:0000738;1.56e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.48e-84,42;CL:0002057,3.48e-84,42;CL:0000473,2.82e-73,48;CL:0000234,2.82e-73,48;CL:0002194,5.40e-58,59;CL:0000576,5.40e-58,59;CL:0000040,5.40e-58,59;CL:0000559,5.40e-58,59;CL:0002009,5.08e-56,61;CL:0000839,1.33e-51,66;CL:0000557,8.49e-51,67;CL:0000766,4.24e-47,72;CL:0002087,1.52e-34,115;CL:0000763,1.82e-30,108;CL:0000049,1.82e-30,108;CL:0000738,9.92e-29,136;CL:0002031,4.09e-27,120;CL:0000037,1.23e-22,168;CL:0000988,2.58e-21,177;CL:0002032,2.14e-19,161;CL:0000837,2.14e-19,161;CL:0000226,9.70e-12,3;CL:0000842,9.70e-12,3;CL:0002393,5.67e-09,9;CL:0002397,5.67e-09,9;CL:0000134,7.24e-09,354;CL:0002320,1.27e-08,361;CL:0000219,9.30e-08,386;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-61;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.55e-40!80;UBERON:0001474!4.58e-37!86;UBERON:0002390!3.60e-35!102;UBERON:0003061!3.60e-35!102;UBERON:0002193!2.02e-31!112;UBERON:0004765!1.32e-30!101;UBERON:0001434!1.32e-30!101;UBERON:0002405!4.37e-26!115;UBERON:0002204!6.56e-16!167;UBERON:0003081!6.17e-13!216;UBERON:0002384!2.07e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!2.55e-40!80;UBERON:0001474!4.58e-37!86;UBERON:0002390!3.60e-35!102;UBERON:0003061!3.60e-35!102;UBERON:0002193!2.02e-31!112;UBERON:0004765!1.32e-30!101;UBERON:0001434!1.32e-30!101;UBERON:0002405!4.37e-26!115;UBERON:0002204!6.56e-16!167;UBERON:0003081!6.17e-13!216;UBERON:0002384!2.07e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-44,76;UBERON:0002390,4.71e-41,98;UBERON:0003061,4.71e-41,98;UBERON:0001474,4.90e-41,82;UBERON:0004765,3.84e-37,90;UBERON:0002193,5.57e-37,108;UBERON:0002405,7.47e-36,93;UBERON:0001434,3.85e-33,100;UBERON:0002204,1.40e-18,167;UBERON:0003081,3.78e-18,203;UBERON:0000926,2.00e-10,315;UBERON:0004120,2.00e-10,315;UBERON:0006603,2.00e-10,315;UBERON:0002384,2.75e-08,371 | |||
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|short_description=p@chr10:105880202..105880239,+ | |short_description=p@chr10:105880202..105880239,+ | ||
}} | }} |
Latest revision as of 10:06, 23 July 2015
Short description: | p@chr10:105880202..105880239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105880202..105880239, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.48e-84 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.48e-84 | 42 |
defensive cell | 2.82e-73 | 48 |
phagocyte | 2.82e-73 | 48 |
monopoietic cell | 5.40e-58 | 59 |
monocyte | 5.40e-58 | 59 |
monoblast | 5.40e-58 | 59 |
promonocyte | 5.40e-58 | 59 |
macrophage dendritic cell progenitor | 5.08e-56 | 61 |
myeloid lineage restricted progenitor cell | 1.33e-51 | 66 |
granulocyte monocyte progenitor cell | 8.49e-51 | 67 |
myeloid leukocyte | 4.24e-47 | 72 |
nongranular leukocyte | 1.52e-34 | 115 |
myeloid cell | 1.82e-30 | 108 |
common myeloid progenitor | 1.82e-30 | 108 |
leukocyte | 9.92e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 4.09e-27 | 120 |
hematopoietic stem cell | 1.23e-22 | 168 |
hematopoietic cell | 2.58e-21 | 177 |
hematopoietic oligopotent progenitor cell | 2.14e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-19 | 161 |
single nucleate cell | 9.70e-12 | 3 |
mononuclear cell | 9.70e-12 | 3 |
intermediate monocyte | 5.67e-09 | 9 |
CD14-positive, CD16-positive monocyte | 5.67e-09 | 9 |
mesenchymal cell | 7.24e-09 | 354 |
connective tissue cell | 1.27e-08 | 361 |
motile cell | 9.30e-08 | 386 |
stem cell | 3.01e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-44 | 76 |
hematopoietic system | 4.71e-41 | 98 |
blood island | 4.71e-41 | 98 |
bone element | 4.90e-41 | 82 |
skeletal element | 3.84e-37 | 90 |
hemolymphoid system | 5.57e-37 | 108 |
immune system | 7.47e-36 | 93 |
skeletal system | 3.85e-33 | 100 |
musculoskeletal system | 1.40e-18 | 167 |
lateral plate mesoderm | 3.78e-18 | 203 |
mesoderm | 2.00e-10 | 315 |
mesoderm-derived structure | 2.00e-10 | 315 |
presumptive mesoderm | 2.00e-10 | 315 |
connective tissue | 2.75e-08 | 371 |