FFCP PHASE1:Hg19::chr10:105128353..105128379,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:105128353..105128379,- | |||
|description=CAGE_peak_at_chr10:105128353..105128379,- | |||
|id=chr10:105128353..105128379,- | |||
|ontology_enrichment_celltype=CL:0000542!5.55e-20!53;CL:0000051!5.55e-20!53;CL:0000838!2.12e-19!52;CL:0000037!4.50e-14!172;CL:0000566!4.50e-14!172;CL:0000988!1.87e-13!182;CL:0002032!5.71e-13!165;CL:0000837!5.71e-13!165;CL:0000084!4.31e-11!25;CL:0000827!4.31e-11!25;CL:0002031!3.97e-10!124;CL:0002087!1.46e-09!119;CL:0000738!9.23e-09!140;CL:0000945!1.42e-07!24;CL:0000826!1.42e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.42e-24;25!CL:0000542;2.41e-23;53!CL:0000791;4.18e-12;18!CL:0000789;4.18e-12;18!CL:0002419;4.18e-12;18!CL:0000945;2.34e-11;24!CL:0000624;1.55e-10;6!CL:0000623;1.73e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.11e-40,53;CL:0000051,1.11e-40,53;CL:0000838,3.84e-39,52;CL:0000084,7.04e-24,25;CL:0000827,7.04e-24,25;CL:0002031,3.85e-19,120;CL:0002032,2.19e-17,161;CL:0000837,2.19e-17,161;CL:0000037,2.73e-17,168;CL:0000738,7.17e-17,136;CL:0000988,7.68e-17,177;CL:0002087,1.08e-16,115;CL:0000791,3.51e-12,18;CL:0000789,3.51e-12,18;CL:0002420,3.51e-12,18;CL:0002419,3.51e-12,18;CL:0000790,3.51e-12,18;CL:0000945,1.29e-11,24;CL:0000826,1.29e-11,24;CL:0000624,1.10e-10,6;CL:0000623,1.21e-08,3;CL:0000825,1.21e-08,3;CL:0000817,6.87e-08,3;CL:0000236,2.01e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.41e-23;53!CL:0000790;4.18e-12;18 | |||
|ontology_enrichment_disease=DOID:162!6.47e-39!235;DOID:14566!5.58e-38!239;DOID:0050687!1.37e-23!143;DOID:305!6.23e-21!106;DOID:0050686!2.69e-20!137;DOID:2531!8.40e-15!51;DOID:0060083!8.40e-15!51;DOID:1240!3.53e-10!39;DOID:0060058!2.24e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.73e-18;10!DOID:2531;5.45e-10;51!DOID:0060083;5.45e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.26e-18,10;DOID:2531,2.37e-16,51;DOID:0060083,2.37e-16,51;DOID:0050686,5.96e-11,137;DOID:162,4.35e-09,235;DOID:14566,1.13e-08,239;DOID:1240,4.63e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.28e-10,4;UBERON:0005058,7.28e-10,4;UBERON:0009113,7.28e-10,4;UBERON:0003295,7.28e-10,4;UBERON:0005562,7.28e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.408001382488506,0,0.286235987131057,0,0,0.993374274723366,0.738905305049512,0.472264687882075,0,0.383829398097213,0,0.919421224478927,0.30120591877825,0,3.40855682553327,1.84820002233648,0.587200878669695,0.553995408531877,1.40381113229099,1.51907609501096,0,0,0.515151135268373,0.145398238779565,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0.637812899895131,0,0,0,0,1.42506371870624,0.99458338599545,0.182664153764634,0,0,0,1.70692089026603,0.400395987036012,0,0,0,1.1384259382189,2.93618594685469,2.29363936875137,0,0.560508562981536,0.790152254325231,2.16380747125216,3.53709686474248,6.5792479679843,0.83593247695339,0.977766799900771,1.4203434172042,1.94826728407911,0.557052284425868,2.06224135232386,1.99380505125259,0,0.25618263945135,0.520237390239513,0,1.10540007114339,0.869409257205157,2.81744470007915,0.535081656179426,1.04535523804977,0.679856056185397,1.91610246800961,1.03088233644789,0.759059076058509,0,0.651083453856419,0,0.301150238155546,0,1.24930726552346,0.236777252044017,0,3.02410114837099,4.01160293675261,2.75166367377318,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.386521706326594,0,0,0.243947412259191,0.662648841607426,0,0,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,5.29755719297581,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,3.1608175918371,2.57545848628462,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0.44024217006613,1.65862492432618,0,1.76739406796932,0,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,2.35378802386407,2.75843064282698,3.01878604803324,2.95188983443421,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.413536052245775,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.877039506583738,1.0457418040996,0,0,0,0.103041011647722,0.457847324091717,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0,0.714695326373367,0,1.29694662238543,0,0,0.106824071127473,0,1.22520107990516,1.11481905075431,1.73123055571734,2.06311345710401,1.11598390910176,0.199579371432817,0.766021480529467,0.635020748171649,1.29848776109822,0.842391534340376,0.912938716132769,0.313359791546046,5.01268954180134,0.338583555603207,0.1605880751037,0,1.70338495076131,2.74804275804612,0,0.223676107892416,0.166849141711909,0.19538809540204,0.278406173895242,0,0,1.33228787199128,0,0.748562161632879,0.146508179271894,0,2.45175445410452,1.70481688083848,0.23874448473769,0.890894042497916,0,0,0,0.445234820091624,1.81284261649436,4.64475897881586,0,1.38141957765574,1.0077309914171,0.613612095012929,0.984678443688556,0,0.359473404589307,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0.1137934482855,0,0.472775363535873,0.344743373241465,0,2.08349993919951,0.885741385813839,0,0,0.663475559587348,0.295547618953547,0,0.21787692703798,0.41827123283581,0,0.569710279235006,0.922255617552241,0.179515288819544,0.651884231532048,0.31900115973192,0.0915975934018623,0,1.02193298195737,0,0.166211681900156,0.451191321234361,0.392125068635479,0.671286347903371,0.948768663620925,0.158936578980379,0.421996129056054,1.30586246527318,0.424059214301822,0.865554558968364,0,0,0.611030144933625,2.37216902944498,0.247127877893006,0.208843899010911,0.067401132980677,0,0,2.37191225980366,1.56531695145672,0.485560759068186,0.394584402849391,0,0,0,4.96067284067825,1.14057010536972,0,0,0,0,0,0.138674673013139,0.173559738335131,0.489961987071888,1.82824333818845,0,0.171986032471617,1.83837029449262,0.730893170861856,0.903270027585302,0,0.0882561266915003,0,0,0,0,0.586654148204409,0.0801588202515337,0.213452994739353,0.799238438328521,0.864542502924636,0.458146384663663,0.857974989309823,0.576219191952599,0.49701014226173,1.41416420770077,0.543616824294456,0,0.407992870545287,0.577901179803038,0,0.136905378891993,0,0,2.10309883423452,0,0,0,0.599037001496973,0,0,0,0,1.16495949527454,0,0.0824158583811665,0.202210631562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| |||
|short_description=p@chr10:105128353..105128379,- | |||
}} |
Latest revision as of 09:58, 23 July 2015
Short description: | p@chr10:105128353..105128379, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105128353..105128379, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.11e-40 | 53 |
common lymphoid progenitor | 1.11e-40 | 53 |
lymphoid lineage restricted progenitor cell | 3.84e-39 | 52 |
T cell | 7.04e-24 | 25 |
pro-T cell | 7.04e-24 | 25 |
hematopoietic lineage restricted progenitor cell | 3.85e-19 | 120 |
hematopoietic oligopotent progenitor cell | 2.19e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.19e-17 | 161 |
hematopoietic stem cell | 2.73e-17 | 168 |
leukocyte | 7.17e-17 | 136 |
hematopoietic cell | 7.68e-17 | 177 |
nongranular leukocyte | 1.08e-16 | 115 |
mature alpha-beta T cell | 3.51e-12 | 18 |
alpha-beta T cell | 3.51e-12 | 18 |
immature T cell | 3.51e-12 | 18 |
mature T cell | 3.51e-12 | 18 |
immature alpha-beta T cell | 3.51e-12 | 18 |
lymphocyte of B lineage | 1.29e-11 | 24 |
pro-B cell | 1.29e-11 | 24 |
CD4-positive, alpha-beta T cell | 1.10e-10 | 6 |
natural killer cell | 1.21e-08 | 3 |
pro-NK cell | 1.21e-08 | 3 |
precursor B cell | 6.87e-08 | 3 |
B cell | 2.01e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.28e-10 | 4 |
hemolymphoid system gland | 7.28e-10 | 4 |
thymic region | 7.28e-10 | 4 |
pharyngeal gland | 7.28e-10 | 4 |
thymus primordium | 7.28e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.26e-18 | 10 |
hematologic cancer | 2.37e-16 | 51 |
immune system cancer | 2.37e-16 | 51 |
organ system cancer | 5.96e-11 | 137 |
cancer | 4.35e-09 | 235 |
disease of cellular proliferation | 1.13e-08 | 239 |
leukemia | 4.63e-07 | 39 |