FFCP PHASE1:Hg19::chr10:101754166..101754178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:101754166..101754178,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:101754166..101754178,- | |description=CAGE_peak_at_chr10:101754166..101754178,- | ||
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|ontology_enrichment_celltype=CL:0002057!2.74e-138!42;CL:0000860!2.05e-128!45;CL:0002194!2.30e-87!63;CL:0000576!2.30e-87!63;CL:0000040!2.30e-87!63;CL:0000559!2.30e-87!63;CL:0000766!9.64e-87!76;CL:0002009!2.04e-84!65;CL:0000839!1.07e-81!70;CL:0000557!2.01e-80!71;CL:0002087!1.63e-59!119;CL:0000738!4.47e-59!140;CL:0000763!8.56e-56!112;CL:0000049!8.56e-56!112;CL:0002031!4.64e-54!124;CL:0000037!4.13e-46!172;CL:0000566!4.13e-46!172;CL:0002032!2.65e-44!165;CL:0000837!2.65e-44!165;CL:0000988!5.49e-43!182;CL:0002393!2.33e-23!9;CL:0002397!2.33e-23!9;CL:0000134!2.14e-19!358;CL:0002320!8.33e-19!365;CL:0000219!1.00e-16!390;CL:0000048!3.10e-14!430;CL:0000723!7.02e-14!436;CL:0000034!2.01e-13!444;CL:0000063!2.96e-08!578;CL:0002371!4.13e-07!591 | |ontology_enrichment_celltype=CL:0002057!2.74e-138!42;CL:0000860!2.05e-128!45;CL:0002194!2.30e-87!63;CL:0000576!2.30e-87!63;CL:0000040!2.30e-87!63;CL:0000559!2.30e-87!63;CL:0000766!9.64e-87!76;CL:0002009!2.04e-84!65;CL:0000839!1.07e-81!70;CL:0000557!2.01e-80!71;CL:0002087!1.63e-59!119;CL:0000738!4.47e-59!140;CL:0000763!8.56e-56!112;CL:0000049!8.56e-56!112;CL:0002031!4.64e-54!124;CL:0000037!4.13e-46!172;CL:0000566!4.13e-46!172;CL:0002032!2.65e-44!165;CL:0000837!2.65e-44!165;CL:0000988!5.49e-43!182;CL:0002393!2.33e-23!9;CL:0002397!2.33e-23!9;CL:0000134!2.14e-19!358;CL:0002320!8.33e-19!365;CL:0000219!1.00e-16!390;CL:0000048!3.10e-14!430;CL:0000723!7.02e-14!436;CL:0000034!2.01e-13!444;CL:0000063!2.96e-08!578;CL:0002371!4.13e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.81e-113;33!CL:0002057;6.81e-113;33!CL:0000473;5.41e-76;39!CL:0000234;5.41e-76;39!CL:0000576;3.36e-51;48!CL:0000766;5.64e-27;69!CL:0000763;2.85e-17;100!CL:0002087;9.24e-15;104!CL:0000738;1.28e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;6.81e-113;33!CL:0002057;6.81e-113;33!CL:0000473;5.41e-76;39!CL:0000234;5.41e-76;39!CL:0000576;3.36e-51;48!CL:0000766;5.64e-27;69!CL:0000763;2.85e-17;100!CL:0002087;9.24e-15;104!CL:0000738;1.28e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.79e-97,42;CL:0002057,5.79e-97,42;CL:0000473,2.00e-84,48;CL:0000234,2.00e-84,48;CL:0002194,7.28e-67,59;CL:0000576,7.28e-67,59;CL:0000040,7.28e-67,59;CL:0000559,7.28e-67,59;CL:0000766,1.06e-64,72;CL:0002009,1.35e-64,61;CL:0000839,1.60e-59,66;CL:0000557,1.35e-58,67;CL:0000763,3.59e-42,108;CL:0000049,3.59e-42,108;CL:0002087,6.79e-33,115;CL:0000738,8.11e-33,136;CL:0002031,2.19e-31,120;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0000988,2.06e-24,177;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000219,4.58e-09,386;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-70;42!CL:0000049;2.17e-12;108 | |ontology_enrichment_development_v019=CL:0002057;1.31e-70;42!CL:0000049;2.17e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.25e-70!80;UBERON:0001474!4.05e-68!86;UBERON:0002390!7.57e-62!102;UBERON:0003061!7.57e-62!102;UBERON:0004765!1.32e-56!101;UBERON:0001434!1.32e-56!101;UBERON:0002193!1.88e-55!112;UBERON:0002405!4.12e-46!115;UBERON:0002204!2.27e-30!167;UBERON:0003081!7.09e-24!216;UBERON:0002384!5.15e-19!375;UBERON:0000926!2.23e-07!448;UBERON:0004120!2.23e-07!448;UBERON:0006603!2.23e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!2.25e-70!80;UBERON:0001474!4.05e-68!86;UBERON:0002390!7.57e-62!102;UBERON:0003061!7.57e-62!102;UBERON:0004765!1.32e-56!101;UBERON:0001434!1.32e-56!101;UBERON:0002193!1.88e-55!112;UBERON:0002405!4.12e-46!115;UBERON:0002204!2.27e-30!167;UBERON:0003081!7.09e-24!216;UBERON:0002384!5.15e-19!375;UBERON:0000926!2.23e-07!448;UBERON:0004120!2.23e-07!448;UBERON:0006603!2.23e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.42e-51,76;UBERON:0001474,2.22e-47,82;UBERON:0004765,6.61e-43,90;UBERON:0002405,2.00e-41,93;UBERON:0002390,3.74e-39,98;UBERON:0003061,3.74e-39,98;UBERON:0001434,2.62e-38,100;UBERON:0002193,3.09e-35,108;UBERON:0002204,1.38e-21,167;UBERON:0003081,4.04e-17,203;UBERON:0000926,1.09e-09,315;UBERON:0004120,1.09e-09,315;UBERON:0006603,1.09e-09,315;UBERON:0002384,1.15e-09,371 | |||
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|short_description=p@chr10:101754166..101754178,- | |short_description=p@chr10:101754166..101754178,- | ||
}} | }} |
Latest revision as of 09:26, 23 July 2015
Short description: | p@chr10:101754166..101754178, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:101754166..101754178, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.79e-97 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.79e-97 | 42 |
defensive cell | 2.00e-84 | 48 |
phagocyte | 2.00e-84 | 48 |
monopoietic cell | 7.28e-67 | 59 |
monocyte | 7.28e-67 | 59 |
monoblast | 7.28e-67 | 59 |
promonocyte | 7.28e-67 | 59 |
myeloid leukocyte | 1.06e-64 | 72 |
macrophage dendritic cell progenitor | 1.35e-64 | 61 |
myeloid lineage restricted progenitor cell | 1.60e-59 | 66 |
granulocyte monocyte progenitor cell | 1.35e-58 | 67 |
myeloid cell | 3.59e-42 | 108 |
common myeloid progenitor | 3.59e-42 | 108 |
nongranular leukocyte | 6.79e-33 | 115 |
leukocyte | 8.11e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 2.19e-31 | 120 |
hematopoietic oligopotent progenitor cell | 3.44e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-27 | 161 |
hematopoietic stem cell | 6.55e-26 | 168 |
hematopoietic cell | 2.06e-24 | 177 |
mesenchymal cell | 2.56e-10 | 354 |
connective tissue cell | 4.84e-10 | 361 |
motile cell | 4.58e-09 | 386 |
multi fate stem cell | 7.22e-08 | 427 |
somatic stem cell | 1.06e-07 | 433 |
stem cell | 1.73e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.42e-51 | 76 |
bone element | 2.22e-47 | 82 |
skeletal element | 6.61e-43 | 90 |
immune system | 2.00e-41 | 93 |
hematopoietic system | 3.74e-39 | 98 |
blood island | 3.74e-39 | 98 |
skeletal system | 2.62e-38 | 100 |
hemolymphoid system | 3.09e-35 | 108 |
musculoskeletal system | 1.38e-21 | 167 |
lateral plate mesoderm | 4.04e-17 | 203 |
mesoderm | 1.09e-09 | 315 |
mesoderm-derived structure | 1.09e-09 | 315 |
presumptive mesoderm | 1.09e-09 | 315 |
connective tissue | 1.15e-09 | 371 |