UBERON:0007297: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007297 | |||
|is_a=UBERON:0006598 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=presumptive pronephric mesoderm | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="nephron primordium" EXACT [ZFA:0001070] | ||
|union_of= | |||
|xref=EFO:0003619;;TAO:0001070;;ZFA:0001070 | |||
}} | }} | ||
Latest revision as of 18:01, 12 September 2014
| Name: | presumptive pronephric mesoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: | "nephron primordium" EXACT [ZFA:0001070] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006598(presumptive structure) |
|---|
Children
| develops from: | UBERON:0005721 (pronephric mesoderm) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Spink12 |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402d | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402d | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419edd | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419edd | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419edd | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419edd | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419edd | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419edd | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585020..63585025, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517b | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517b | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26732045..26732085, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67e | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67e | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562f | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562f | p10@PAX2 |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562f | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562f | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562f | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562f | p10@PAX2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155923..90155932,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:90155923..90155932, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:23045782..23045791, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:34107586..34107593, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379159..21379162, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:70761885..70761895,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:70761885..70761895, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:26704579..26704582, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:103837894..103837900,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr14:103837894..103837900, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:75798157..75798162, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p9@Tecta |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:130496372..130496393,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:130496372..130496393, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:96150839..96150842, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:35930706..35930717, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51680551..51680555,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr14:51680551..51680555, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379107..21379136,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379107..21379136, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:56515486..56515496,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr10:56515486..56515496, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:36016859..36016897, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101958855..101958871,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:101958855..101958871, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152302813..152302821,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@Defb20 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:25706249..25706254, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p2@Gm6040, p2@LOC100503992 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90156002..90156013,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:90156002..90156013, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:51680551..51680555,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr14:51680551..51680555, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:53955299..53955306,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:53955299..53955306, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:34813361..34813403,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:34813361..34813403, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:28323634..28323657,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr16:28323634..28323657, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:105797824..105797838,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p13@Cyb561 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21381777..21381789,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21381777..21381789, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:12571679..12571688,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:12571679..12571688, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:65995799..65995810,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr7:65995799..65995810, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:25563187..25563205,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr7:25563187..25563205, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:66513886..66513897,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:66513886..66513897, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:24670830..24670845,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr17:24670830..24670845, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr3:103650730..103650741,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr3:103650730..103650741, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@Gm3428 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:148676919..148676930,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@9230104L09Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:75304900..75304907,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr15:75304900..75304907, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:26727675..26727681, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:35930667..35930691, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:103896102..103896116,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr12:103896102..103896116, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:89596972..89596981, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:31379972..31379981, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@9230104L09Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:101959159..101959163,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:101959159..101959163, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379372..21379404, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:123977104..123977120,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p1@ENSMUST00000139012, p1@uc008uqo.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51627586..51627595,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p4@Rnase10 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21378296..21378303,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21378296..21378303, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:126604677..126604701,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:126604677..126604701, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35585507..35585517,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p4@Gm17727 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:123977104..123977120,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p1@ENSMUST00000139012, p1@uc008uqo.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:39707572..39707583,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:39707572..39707583, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:54678902..54678911,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr15:54678902..54678911, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:103896102..103896116,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr12:103896102..103896116, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:50280181..50280192,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:50280181..50280192, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:31379845..31379855, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:11079838..11079844, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:167480413..167480463,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:167480413..167480463, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:109379339..109379349,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p15@Pgap2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21380610..21380620,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21380610..21380620, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19141471..19141518,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:19141471..19141518, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:24270118..24270122,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:24270118..24270122, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21378871..21378901, - |
