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{{UBERON
{{UBERON
|id=UBERON:0005911
|alt_id=
|name=endo-epithelium
|namespace=
|def="Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]" [FMA:69065, FMA:FMA]
|xref=FMA:69065
|is_a=UBERON:0000483;;UBERON:0004119
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]" [FMA:69065, FMA:FMA]
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0000925
|develops_from=UBERON:0000925
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005911
|is_a=UBERON:0000483 ;;UBERON:0004119
|is_obsolete=
|located_in=
|located_in=
|name=endo-epithelium
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:69065
}}
}}

Latest revision as of 17:55, 12 September 2014

Name:endo-epithelium
Namespace:FANTOM
Definition:"Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]" [FMA:69065, FMA:FMA]
Xrefs:
links:
FMA:69065

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000483(epithelium),UBERON:0004119(endoderm-derived structure)
develops_from:UBERON:0000925(endoderm)



Children

is a:UBERON:0000118 (lung bud),UBERON:0001281 (hepatic sinusoid),UBERON:0003258 (endoderm of foregut),UBERON:0003351 (pharyngeal epithelium),UBERON:0003922 (pancreatic epithelial bud),UBERON:0004802 (respiratory tract epithelium),UBERON:0004820 (bile duct epithelium),UBERON:0005356 (Rathke's pouch),UBERON:0005910 (transitional epithelium),UBERON:0009497 (epithelium of foregut-midgut junction)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005911 (endo-epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.73e-28FFCP PHASE2:Hg19::chr14:38064590..38064606,-#_4490e51fed8c5f597bd5b5d2f607d037p2@FOXA1
1.73e-28FFCP PHASE1:Hg19::chr14:38064590..38064606,-#_4490e51fed8c5f597bd5b5d2f607d037p2@FOXA1
1.62e-27FFCP PHASE2:Mm9::chr16:34807407..34807430,+#_e06d4a6b5e52c819c45f19efc3848a5bp@chr16:34807407..34807430, +
1.62e-27FFCP PHASE1:Mm9::chr16:34807407..34807430,+#_e06d4a6b5e52c819c45f19efc3848a5bp@chr16:34807407..34807430, +
1.17e-26FFCP PHASE1:Mm9::chr14:30823509..30823529,+#_abbc407381a9f33c9c8c80cb2ee2da98p@chr14:30823509..30823529, +
1.17e-26FFCP PHASE2:Mm9::chr14:30823509..30823529,+#_abbc407381a9f33c9c8c80cb2ee2da98p@chr14:30823509..30823529, +
9.2e-26FFCP PHASE1:Hg19::chr6:8652489..8652515,+#_e8ba069730da16a454d471fee0205626p1@HULC
9.2e-26FFCP PHASE2:Hg19::chr6:8652489..8652515,+#_e8ba069730da16a454d471fee0205626p1@HULC
1.69e-25FFCP PHASE2:Hg19::chr3:111451321..111451372,+#_b0ce959688d69927b4873a9f6bfb10e2p3@PHLDB2
1.69e-25FFCP PHASE1:Hg19::chr3:111451321..111451372,+#_b0ce959688d69927b4873a9f6bfb10e2p3@PHLDB2
6.39e-25FFCP PHASE1:Hg19::chr13:76334880..76334887,+#_84961212887ef828b74902f3f92be304p34@LMO7
6.39e-25FFCP PHASE2:Hg19::chr13:76334880..76334887,+#_84961212887ef828b74902f3f92be304p34@LMO7
1.86e-24FFCP PHASE1:Hg19::chr3:111451297..111451320,+#_874de6c9f6bb32873fcc7ffd5eb487a4p3@PLCXD2
1.86e-24FFCP PHASE2:Hg19::chr3:111451297..111451320,+#_874de6c9f6bb32873fcc7ffd5eb487a4p3@PLCXD2
1.04e-23FFCP PHASE1:Hg19::chr6:64231600..64231615,+#_adfe98c5945abd30eb4211cef10a5e3cp24@PTP4A1
1.04e-23FFCP PHASE2:Hg19::chr6:64231600..64231615,+#_adfe98c5945abd30eb4211cef10a5e3cp24@PTP4A1
1.09e-23FFCP PHASE1:Hg19::chr10:101841398..101841415,-#_b7bcb0aca9c80e2c455e7a736cf9d351p2@CPN1
1.09e-23FFCP PHASE2:Hg19::chr10:101841398..101841415,-#_b7bcb0aca9c80e2c455e7a736cf9d351p2@CPN1
1.16e-23FFCP PHASE1:Hg19::chr10:101841588..101841632,-#_e6823abc7d6b5d0058a49892aaa3a24bp1@CPN1
1.16e-23FFCP PHASE2:Hg19::chr10:101841588..101841632,-#_e6823abc7d6b5d0058a49892aaa3a24bp1@CPN1
2.35e-23FFCP PHASE2:Hg19::chr14:38064797..38064843,+#_405d833a74c9c838e8cfea6521f4fe4dp1@TTC6
2.35e-23FFCP PHASE1:Hg19::chr14:38064797..38064843,+#_405d833a74c9c838e8cfea6521f4fe4dp1@TTC6
4.97e-23FFCP PHASE2:Mm9::chr16:34807285..34807303,+#_c38ffc224f7de1b7546a6ee30c490908p@chr16:34807285..34807303, +
4.97e-23FFCP PHASE1:Mm9::chr16:34807285..34807303,+#_c38ffc224f7de1b7546a6ee30c490908p@chr16:34807285..34807303, +
5.53e-23FFCP PHASE2:Hg19::chr14:38064429..38064486,-#_fd119860efc8856feb5851187838db48p1@FOXA1
5.53e-23FFCP PHASE1:Hg19::chr14:38064429..38064486,-#_fd119860efc8856feb5851187838db48p1@FOXA1
7.28e-23FFCP PHASE1:Mm9::chr2:26212358..26212425,-#_24ec98a1364e2569efd39ada2d103bf7p@chr2:26212358..26212425, -
7.28e-23FFCP PHASE2:Mm9::chr2:26212358..26212425,-#_24ec98a1364e2569efd39ada2d103bf7p@chr2:26212358..26212425, -
8.99e-23FFCP PHASE2:Mm9::chr18:39026735..39026746,-#_77150326a56050f77c6aa6add62200fdp8@Fgf1
8.99e-23FFCP PHASE1:Mm9::chr18:39026735..39026746,-#_77150326a56050f77c6aa6add62200fdp8@Fgf1
1.44e-22FFCP PHASE2:Hg19::chr17:7082668..7082725,-#_70627a288950b17a69ad57545c4893f6p1@ASGR1
1.44e-22FFCP PHASE1:Hg19::chr17:7082668..7082725,-#_70627a288950b17a69ad57545c4893f6p1@ASGR1
1.84e-22FFCP PHASE2:Mm9::chr7:87171081..87171101,+#_ad12e9014c9a50ab56b9116c18cc2654p6@Zfp710
1.84e-22FFCP PHASE1:Mm9::chr7:87171081..87171101,+#_ad12e9014c9a50ab56b9116c18cc2654p6@Zfp710
4.84e-22FFCP PHASE1:Mm9::chr17:36304632..36304649,-#_ece3d97178e87f57151fc3068130c86ep@chr17:36304632..36304649, -
4.84e-22FFCP PHASE2:Mm9::chr17:36304632..36304649,-#_ece3d97178e87f57151fc3068130c86ep@chr17:36304632..36304649, -
5.59e-22FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_9d0d3cdc53c4ed7822176464b19cdcdep5@NR1H4
5.59e-22FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_9d0d3cdc53c4ed7822176464b19cdcdep5@NR1H4
1.26e-21FFCP PHASE1:Hg19::chr6:64231645..64231678,+#_d7bb327cb454bf52c66a4bdc44986d5fp6@PTP4A1
1.26e-21FFCP PHASE2:Hg19::chr6:64231645..64231678,+#_d7bb327cb454bf52c66a4bdc44986d5fp6@PTP4A1
1.65e-21FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_4131e6842e2ef6e0a6c2853d424efeddp1@ENST00000421143
1.65e-21FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_4131e6842e2ef6e0a6c2853d424efeddp1@ENST00000421143
1.69e-21FFCP PHASE1:Hg19::chr1:161192171..161192185,-#_6832f53fc1bd2b325a3bb0090421b817p@chr1:161192171..161192185, -
1.69e-21FFCP PHASE2:Hg19::chr1:161192171..161192185,-#_6832f53fc1bd2b325a3bb0090421b817p@chr1:161192171..161192185, -
4.88e-21FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_4b4a21e19391b60a5a1bdfa8aeb051bep2@uc009nzu.1
4.88e-21FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_4b4a21e19391b60a5a1bdfa8aeb051bep2@uc009nzu.1
4.88e-21FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_4b4a21e19391b60a5a1bdfa8aeb051bep8@uc009bpa.1
4.88e-21FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_4b4a21e19391b60a5a1bdfa8aeb051bep8@uc009bpa.1
5.5e-21FFCP PHASE2:Hg19::chr13:113760134..113760150,+#_ebd3c14e55eef9dbe4658afa10dba15ep2@F7
5.5e-21FFCP PHASE1:Hg19::chr13:113760134..113760150,+#_ebd3c14e55eef9dbe4658afa10dba15ep2@F7
6.6e-21FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_ef9aad7bed3f0cd8b59373c37d066c7fp@chr11:60622345..60622377, -
6.6e-21FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_ef9aad7bed3f0cd8b59373c37d066c7fp@chr11:60622345..60622377, -
7.09e-21FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_2a0b11b4d1b4df447433eca35a6cd5d2p6@Insc
7.09e-21FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_2a0b11b4d1b4df447433eca35a6cd5d2p6@Insc
8.35e-21FFCP PHASE1:Hg19::chr14:38060540..38060566,-#_13c4ca9a6b05efe4178c02bc15fecca1p@chr14:38060540..38060566, -
8.35e-21FFCP PHASE2:Hg19::chr14:38060540..38060566,-#_13c4ca9a6b05efe4178c02bc15fecca1p@chr14:38060540..38060566, -
8.35e-21FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_cd8be82feb1560ebb8f2c977d588320bp4@uc009bpa.1
8.35e-21FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_cd8be82feb1560ebb8f2c977d588320bp4@uc009bpa.1
8.43e-21FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_b4661cb6c2a830e4fed1279b7bfe627fp@chr5:90897694..90897705, +
8.43e-21FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_b4661cb6c2a830e4fed1279b7bfe627fp@chr5:90897694..90897705, +
1.01e-20FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_a8b19e92d566e19a0e3bf58174b06654p@chr19:25169885..25169900, +
1.01e-20FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_a8b19e92d566e19a0e3bf58174b06654p@chr19:25169885..25169900, +
1.28e-20FFCP PHASE1:Hg19::chr12:100867695..100867706,+#_2e15a5dd8014ed3aaf5426c8247f99bep6@NR1H4
1.28e-20FFCP PHASE2:Hg19::chr12:100867695..100867706,+#_2e15a5dd8014ed3aaf5426c8247f99bep6@NR1H4
1.75e-20FFCP PHASE2:Hg19::chr8:17752845..17752864,-#_ef7308886a2cf54f2d7c41d33f54ab1ep2@FGL1
1.75e-20FFCP PHASE1:Hg19::chr8:17752845..17752864,-#_ef7308886a2cf54f2d7c41d33f54ab1ep2@FGL1
2.14e-20FFCP PHASE1:Hg19::chr10:101542585..101542592,+#_51dfb699dc0215f0688d040e39ead762p6@ABCC2
2.14e-20FFCP PHASE2:Hg19::chr10:101542585..101542592,+#_51dfb699dc0215f0688d040e39ead762p6@ABCC2
3.21e-20FFCP PHASE2:Hg19::chr20:22566120..22566136,-#_e2afac6725c66ee27fd78264310d3a54p4@FOXA2
3.21e-20FFCP PHASE1:Hg19::chr20:22566120..22566136,-#_e2afac6725c66ee27fd78264310d3a54p4@FOXA2
6.11e-20FFCP PHASE1:Mm9::chr11:3931609..3931617,+#_fc11ee14e64ad5e9cd5a1573a0b2c8a2p3@Sec14l4
6.11e-20FFCP PHASE2:Mm9::chr11:3931609..3931617,+#_fc11ee14e64ad5e9cd5a1573a0b2c8a2p3@Sec14l4
6.32e-20FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_9dd3682873a44df64315f04d7b9f8013p@chr2:10041210..10041222, -
6.32e-20FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_9dd3682873a44df64315f04d7b9f8013p@chr16:22898981..22898988, -
6.32e-20FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_9dd3682873a44df64315f04d7b9f8013p@chr16:22898981..22898988, -
6.32e-20FFCP PHASE1:Mm9::chr6:128436166..128436185,-#_9dd3682873a44df64315f04d7b9f8013p@chr6:128436166..128436185, -
6.32e-20FFCP PHASE2:Mm9::chr16:22894900..22894910,+#_9dd3682873a44df64315f04d7b9f8013p@chr16:22894900..22894910, +
6.32e-20FFCP PHASE2:Mm9::chr6:33991787..33991793,-#_9dd3682873a44df64315f04d7b9f8013p@chr6:33991787..33991793, -
6.32e-20FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_9dd3682873a44df64315f04d7b9f8013p@chr16:22894900..22894910, +
6.32e-20FFCP PHASE1:Mm9::chr6:33991787..33991793,-#_9dd3682873a44df64315f04d7b9f8013p@chr6:33991787..33991793, -
6.32e-20FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_9dd3682873a44df64315f04d7b9f8013p@chr12:105004018..105004046, -
6.32e-20FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_9dd3682873a44df64315f04d7b9f8013p@chr6:128436166..128436185, -
6.32e-20FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_9dd3682873a44df64315f04d7b9f8013p@chr12:105004018..105004046, -
6.32e-20FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_9dd3682873a44df64315f04d7b9f8013p@chr2:10041210..10041222, -
6.63e-20FFCP PHASE1:Hg19::chr1:161192149..161192162,-#_effc4633a8e999a6948b828aef185e2cp@chr1:161192149..161192162, -
6.63e-20FFCP PHASE2:Hg19::chr1:161192149..161192162,-#_effc4633a8e999a6948b828aef185e2cp@chr1:161192149..161192162, -
7.46e-20FFCP PHASE2:Hg19::chr14:36989379..36989390,-#_621521fa1f4e6d2d5bc66739821e0e51p8@NKX2-1
7.46e-20FFCP PHASE1:Hg19::chr14:36989379..36989390,-#_621521fa1f4e6d2d5bc66739821e0e51p8@NKX2-1
7.97e-20FFCP PHASE1:Hg19::chr12:100867736..100867750,+#_3194b1ec7c9e92848cc0177dda7e9532p4@NR1H4
7.97e-20FFCP PHASE2:Hg19::chr12:100867736..100867750,+#_3194b1ec7c9e92848cc0177dda7e9532p4@NR1H4
9.18e-20FFCP PHASE1:Hg19::chr1:177939154..177939204,-#_12f4a665571f8d6b500a2e7c09340d91p4@SEC16B
9.18e-20FFCP PHASE2:Hg19::chr1:177939154..177939204,-#_12f4a665571f8d6b500a2e7c09340d91p4@SEC16B
9.37e-20FFCP PHASE2:Mm9::chr7:75420856..75420911,+#_995ddc262f9569ebe77df54c1302cbe2p1@ENSMUST00000153805
9.37e-20FFCP PHASE1:Mm9::chr7:75420856..75420911,+#_995ddc262f9569ebe77df54c1302cbe2p1@ENSMUST00000153805
9.77e-20FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_b26d7498ed5a24798f456d14643d59bdp1@ENSMUST00000103288, p1@uc009bpl.1
9.77e-20FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_b26d7498ed5a24798f456d14643d59bdp1@ENSMUST00000103288, p1@uc009bpl.1
9.9e-20FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_b627925651bcc89ea267949dd7520395p@chr13:23928766..23928779, +
9.9e-20FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_b627925651bcc89ea267949dd7520395p@chr13:23928766..23928779, +
9.96e-20FFCP PHASE2:Hg19::chr9:123812542..123812560,-#_d8de79f39f56173cc3117c3067598ad5p1@C5
9.96e-20FFCP PHASE1:Hg19::chr9:123812542..123812560,-#_d8de79f39f56173cc3117c3067598ad5p1@C5

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