CL:0000766: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=myeloid leukocyte | |name=myeloid leukocyte | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:36, 12 September 2014
| Name: | myeloid leukocyte |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A cell of the monocyte, granulocyte, or mast cell lineage." [GOC:add] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000738(leukocyte),CL:0000763(myeloid cell) |
|---|---|
| develops_from: | CL:0000049(common myeloid progenitor) |
Children
| is a: | CL:0000092 (osteoclast),CL:0000094 (granulocyte),CL:0000097 (mast cell),CL:0000235 (macrophage),CL:0000453 (Langerhans cell),CL:0000576 (monocyte),CL:0000840 (immature conventional dendritic cell) |
|---|---|
| disjoint from: | CL:0000542 (lymphocyte) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10731-110B2
- 11224-116B9 (CD14+ Monocytes, donor1)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11232-116C8 (Macrophage - monocyte derived, donor1)
- 11233-116C9 (Neutrophils, donor1)
... further results Mouse (Mus musculus)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10731-110B2
- 11224-116B9 (CD14+ Monocytes, donor1)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11232-116C8 (Macrophage - monocyte derived, donor1)
- 11233-116C9 (Neutrophils, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000766 (myeloid leukocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.29e-147 | FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_5f9f79d7400a5848cd4e95eef2d59aba | p@chr15:65174546..65174583, - |
| 4.29e-147 | FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_5f9f79d7400a5848cd4e95eef2d59aba | p@chr15:65174546..65174583, - |
| 8.11e-141 | FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_eff77684235f7361ec712fd9634dc8d7 | p@chr1:161188661..161188679, + |
| 8.11e-141 | FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_eff77684235f7361ec712fd9634dc8d7 | p@chr1:161188661..161188679, + |
| 1.37e-136 | FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_25203bbad666749bc2ca3476d465d43d | p@chr14:103587759..103587770, + |
| 1.37e-136 | FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_25203bbad666749bc2ca3476d465d43d | p@chr14:103587759..103587770, + |
| 5.26e-136 | FFCP PHASE2:Hg19::chr1:161187824..161187847,+#_b8d62e8f2eb083b82b947477b9be8caa | p@chr1:161187824..161187847, + |
| 5.26e-136 | FFCP PHASE1:Hg19::chr1:161187824..161187847,+#_b8d62e8f2eb083b82b947477b9be8caa | p@chr1:161187824..161187847, + |
| 2.95e-134 | FFCP PHASE1:Hg19::chr16:31363390..31363404,-#_d365ae21117451aa6a330ed6081a2380 | p@chr16:31363390..31363404, - |
| 2.95e-134 | FFCP PHASE2:Hg19::chr16:31363390..31363404,-#_d365ae21117451aa6a330ed6081a2380 | p@chr16:31363390..31363404, - |
| 3.76e-134 | FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_1e27f4fcb6924b6eda654af5a9816b2f | p7@EMILIN2 |
| 3.76e-134 | FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_1e27f4fcb6924b6eda654af5a9816b2f | p7@EMILIN2 |
| 1.02e-133 | FFCP PHASE2:Hg19::chr17:7482481..7482508,-#_4d4813b1b61d89160e00f9b91d49876a | p@chr17:7482481..7482508, - |
| 1.02e-133 | FFCP PHASE1:Hg19::chr17:7482481..7482508,-#_4d4813b1b61d89160e00f9b91d49876a | p@chr17:7482481..7482508, - |
| 1.48e-133 | FFCP PHASE2:Hg19::chr3:149535068..149535093,+#_c694a7a4e398d8955dc67c4558489ab7 | p4@RNF13 |
| 1.48e-133 | FFCP PHASE1:Hg19::chr3:149535068..149535093,+#_c694a7a4e398d8955dc67c4558489ab7 | p4@RNF13 |
| 5.99e-133 | FFCP PHASE1:Hg19::chr1:161188746..161188758,+#_83a807b279f8db9452bdf2bc2abeae12 | p@chr1:161188746..161188758, + |
| 5.99e-133 | FFCP PHASE2:Hg19::chr1:161188746..161188758,+#_83a807b279f8db9452bdf2bc2abeae12 | p@chr1:161188746..161188758, + |
| 3.87e-131 | FFCP PHASE1:Hg19::chr16:31363857..31363874,-#_c5160695cb9d444e506aa4f1679f22d2 | p@chr16:31363857..31363874, - |
| 3.87e-131 | FFCP PHASE2:Hg19::chr16:31363857..31363874,-#_c5160695cb9d444e506aa4f1679f22d2 | p@chr16:31363857..31363874, - |
| 6.2e-130 | FFCP PHASE1:Hg19::chr1:161188686..161188721,+#_7c04cccc70ccaa751418454c02372156 | p@chr1:161188686..161188721, + |
| 6.2e-130 | FFCP PHASE2:Hg19::chr1:161188686..161188721,+#_7c04cccc70ccaa751418454c02372156 | p@chr1:161188686..161188721, + |
| 3.47e-129 | FFCP PHASE2:Hg19::chr7:77050554..77050601,+#_ca9c5bcb4998149344213a137f137c3b | p@chr7:77050554..77050601, + |
| 3.47e-129 | FFCP PHASE1:Hg19::chr7:77050554..77050601,+#_ca9c5bcb4998149344213a137f137c3b | p@chr7:77050554..77050601, + |
| 4.08e-129 | FFCP PHASE1:Hg19::chr3:149531627..149531651,+#_876242161fc3c6f716280b8436660711 | p7@RNF13 |
| 4.08e-129 | FFCP PHASE2:Hg19::chr3:149531627..149531651,+#_876242161fc3c6f716280b8436660711 | p7@RNF13 |
| 3.78e-128 | FFCP PHASE1:Hg19::chr3:128943968..128943986,+#_e331b266ec6852344ff16876142c0bd8 | p@chr3:128943968..128943986, + |
| 3.78e-128 | FFCP PHASE2:Hg19::chr3:128943968..128943986,+#_e331b266ec6852344ff16876142c0bd8 | p@chr3:128943968..128943986, + |
| 5.82e-128 | FFCP PHASE2:Hg19::chr20:2191870..2191909,-#_dd4a3902b7d6c12eb6899a2020cc82fd | p@chr20:2191870..2191909, - |
| 5.82e-128 | FFCP PHASE1:Hg19::chr20:2191870..2191909,-#_dd4a3902b7d6c12eb6899a2020cc82fd | p@chr20:2191870..2191909, - |
| 3.1e-127 | FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_537b05ea8238057533063fff88a3be8b | p@chr16:50313426..50313459, + |
| 3.1e-127 | FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_537b05ea8238057533063fff88a3be8b | p@chr16:50313426..50313459, + |
| 4.78e-127 | FFCP PHASE2:Hg19::chr1:111743000..111743011,+#_68495660db35ae4d2b992f6d83f785d7 | p8@CHI3L2 |
| 4.78e-127 | FFCP PHASE1:Hg19::chr1:111743000..111743011,+#_68495660db35ae4d2b992f6d83f785d7 | p8@CHI3L2 |
| 7.07e-127 | FFCP PHASE1:Hg19::chr7:99971180..99971191,+#_a0deef4c46af7a139d25389c7464c3ca | p3@PILRA |
| 7.07e-127 | FFCP PHASE2:Hg19::chr7:99971180..99971191,+#_a0deef4c46af7a139d25389c7464c3ca | p3@PILRA |
| 2.4e-126 | FFCP PHASE2:Hg19::chr6:134694635..134694653,-#_7702f05da5c2a6e168fb8775da6ad2c9 | p@chr6:134694635..134694653, - |
| 2.4e-126 | FFCP PHASE1:Hg19::chr6:134694635..134694653,-#_7702f05da5c2a6e168fb8775da6ad2c9 | p@chr6:134694635..134694653, - |
| 3.14e-126 | FFCP PHASE1:Hg19::chr19:18285955..18285972,+#_df4fe3da3b1ecfbeadec3087c85d2856 | p@chr19:18285955..18285972, + |
| 3.14e-126 | FFCP PHASE2:Hg19::chr19:18285955..18285972,+#_df4fe3da3b1ecfbeadec3087c85d2856 | p@chr19:18285955..18285972, + |
| 4.13e-126 | FFCP PHASE1:Hg19::chr11:1866014..1866040,+#_112738c0ab81051078538f3ea7933bab | p@chr11:1866014..1866040, + |
| 4.13e-126 | FFCP PHASE2:Hg19::chr11:1866014..1866040,+#_112738c0ab81051078538f3ea7933bab | p@chr11:1866014..1866040, + |
| 7.04e-125 | FFCP PHASE2:Hg19::chr16:8738211..8738249,+#_9c132d6e5dff1eaf696c378ea3282a1e | p@chr16:8738211..8738249, + |
| 7.04e-125 | FFCP PHASE1:Hg19::chr16:8738211..8738249,+#_9c132d6e5dff1eaf696c378ea3282a1e | p@chr16:8738211..8738249, + |
| 1.47e-124 | FFCP PHASE1:Hg19::chr1:150724282..150724308,-#_389b5fb99c82d5db69525e9fa2597614 | p8@CTSS |
| 1.47e-124 | FFCP PHASE2:Hg19::chr1:150724282..150724308,-#_389b5fb99c82d5db69525e9fa2597614 | p8@CTSS |
| 1.79e-124 | FFCP PHASE1:Hg19::chr19:47823348..47823381,+#_8bdc8655bd42e8110a0f0d777971b5e9 | p2@C5AR1 |
| 1.79e-124 | FFCP PHASE2:Hg19::chr19:47823348..47823381,+#_8bdc8655bd42e8110a0f0d777971b5e9 | p2@C5AR1 |
| 2.09e-124 | FFCP PHASE1:Hg19::chr6:134617297..134617322,+#_b51e8ed4df9909eb74930c1519618d12 | p@chr6:134617297..134617322, + |
| 2.09e-124 | FFCP PHASE2:Hg19::chr6:134617297..134617322,+#_b51e8ed4df9909eb74930c1519618d12 | p@chr6:134617297..134617322, + |
| 3.09e-124 | FFCP PHASE2:Hg19::chr16:31367943..31367970,+#_e40f21f920082faf2cfb8bbcd7d71b6d | p@chr16:31367943..31367970, + |
| 3.09e-124 | FFCP PHASE1:Hg19::chr16:31367943..31367970,+#_e40f21f920082faf2cfb8bbcd7d71b6d | p@chr16:31367943..31367970, + |
| 3.11e-124 | FFCP PHASE1:Hg19::chr10:20105868..20105875,+#_f1a4dc1cbb88fdef671ba6a11b6ad7c4 | p8@PLXDC2 |
| 3.11e-124 | FFCP PHASE2:Hg19::chr10:20105868..20105875,+#_f1a4dc1cbb88fdef671ba6a11b6ad7c4 | p8@PLXDC2 |
| 5.53e-124 | FFCP PHASE1:Hg19::chr16:31361872..31361900,+#_02750a47ca5b3a1ec46d1569369ca41b | p@chr16:31361872..31361900, + |
| 5.53e-124 | FFCP PHASE2:Hg19::chr16:31361872..31361900,+#_02750a47ca5b3a1ec46d1569369ca41b | p@chr16:31361872..31361900, + |
| 5.95e-124 | FFCP PHASE1:Hg19::chr7:97912555..97912575,-#_6b29df4ed76980fb8c815f7470787612 | p@chr7:97912555..97912575, - |
| 5.95e-124 | FFCP PHASE2:Hg19::chr7:97912555..97912575,-#_6b29df4ed76980fb8c815f7470787612 | p@chr7:97912555..97912575, - |
| 9.32e-124 | FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_5bf369bff6fe7ae234336d598d7ebcd2 | p@chr19:18286116..18286156, + |
| 9.32e-124 | FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_5bf369bff6fe7ae234336d598d7ebcd2 | p@chr19:18286116..18286156, + |
| 1.64e-123 | FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_4b1bd1c97afcf34455d77fea8857a850 | p1@CYP1B1-AS1 |
| 1.64e-123 | FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_4b1bd1c97afcf34455d77fea8857a850 | p1@CYP1B1-AS1 |
| 2.92e-123 | FFCP PHASE2:Hg19::chr1:161187193..161187205,+#_15c1b2c2795285df33ab9b82c6154445 | p@chr1:161187193..161187205, + |
| 2.92e-123 | FFCP PHASE1:Hg19::chr1:161187193..161187205,+#_15c1b2c2795285df33ab9b82c6154445 | p@chr1:161187193..161187205, + |
| 5.22e-123 | FFCP PHASE1:Hg19::chr1:1711415..1711426,-#_933ebe0c6487e6e3af67730bba16947a | p4@NADK |
| 5.22e-123 | FFCP PHASE2:Hg19::chr1:1711415..1711426,-#_933ebe0c6487e6e3af67730bba16947a | p4@NADK |
| 6.31e-123 | FFCP PHASE2:Hg19::chr17:4642716..4642727,-#_3f175d8ef48d0c7a4aa8c85830fe5d0e | p7@CXCL16 |
| 6.31e-123 | FFCP PHASE1:Hg19::chr17:4642716..4642727,-#_3f175d8ef48d0c7a4aa8c85830fe5d0e | p7@CXCL16 |
| 6.72e-123 | FFCP PHASE2:Hg19::chr17:4639798..4639823,+#_1da76597968032bc5732794e81825f08 | p@chr17:4639798..4639823, + |
| 6.72e-123 | FFCP PHASE1:Hg19::chr17:4639798..4639823,+#_1da76597968032bc5732794e81825f08 | p@chr17:4639798..4639823, + |
| 1.14e-122 | FFCP PHASE1:Hg19::chr12:10270166..10270201,-#_db337eaf9a4d8d75315501849a5a3285 | p@chr12:10270166..10270201, - |
| 1.14e-122 | FFCP PHASE2:Hg19::chr12:10270166..10270201,-#_db337eaf9a4d8d75315501849a5a3285 | p@chr12:10270166..10270201, - |
| 1.16e-122 | FFCP PHASE2:Hg19::chr5:169723736..169723779,+#_dd1b75930bc554205b1aa75bb0b90703 | p@chr5:169723736..169723779, + |
| 1.16e-122 | FFCP PHASE1:Hg19::chr5:169723736..169723779,+#_dd1b75930bc554205b1aa75bb0b90703 | p@chr5:169723736..169723779, + |
| 3.32e-122 | FFCP PHASE2:Hg19::chr10:73648867..73648884,+#_61e074a4cb0392c3bb39ccb184171fc9 | p@chr10:73648867..73648884, + |
| 3.32e-122 | FFCP PHASE1:Hg19::chr10:73648867..73648884,+#_61e074a4cb0392c3bb39ccb184171fc9 | p@chr10:73648867..73648884, + |
| 4.6e-122 | FFCP PHASE2:Hg19::chr4:185314125..185314143,-#_9d6542d2e72d2ee9b92449eac90e713f | p@chr4:185314125..185314143, - |
| 4.6e-122 | FFCP PHASE1:Hg19::chr4:185314125..185314143,-#_9d6542d2e72d2ee9b92449eac90e713f | p@chr4:185314125..185314143, - |
| 5.93e-122 | FFCP PHASE1:Hg19::chrX:152086449..152086473,+#_76b5a2379918101fffd462a3b49e7a25 | p4@ZNF185 |
| 5.93e-122 | FFCP PHASE2:Hg19::chrX:152086449..152086473,+#_76b5a2379918101fffd462a3b49e7a25 | p4@ZNF185 |
| 6.65e-122 | FFCP PHASE2:Hg19::chr15:63414537..63414558,-#_827a744aa5563f165c5e355f477456ed | p@chr15:63414537..63414558, - |
| 6.65e-122 | FFCP PHASE2:Hg19::chr17:40168698..40168726,-#_827a744aa5563f165c5e355f477456ed | p1@AK126179 |
| 6.65e-122 | FFCP PHASE1:Hg19::chr15:63414537..63414558,-#_827a744aa5563f165c5e355f477456ed | p@chr15:63414537..63414558, - |
| 6.65e-122 | FFCP PHASE1:Hg19::chr17:40168698..40168726,-#_827a744aa5563f165c5e355f477456ed | p1@AK126179 |
| 9.06e-122 | FFCP PHASE2:Hg19::chr1:161187774..161187799,+#_e557df5b9ed4c0cdd2123d308d2bcfd0 | p@chr1:161187774..161187799, + |
| 9.06e-122 | FFCP PHASE1:Hg19::chr1:161187774..161187799,+#_e557df5b9ed4c0cdd2123d308d2bcfd0 | p@chr1:161187774..161187799, + |
| 1.22e-121 | FFCP PHASE1:Hg19::chr10:134823232..134823267,+#_0aade46a044bbded750a3a21ef13b116 | p@chr10:134823232..134823267, + |
| 1.22e-121 | FFCP PHASE2:Hg19::chr10:134823232..134823267,+#_0aade46a044bbded750a3a21ef13b116 | p@chr10:134823232..134823267, + |
| 1.82e-121 | FFCP PHASE2:Hg19::chr16:31361634..31361656,-#_ef16d0912cdc8fbc377f68c0ab5d1482 | p@chr16:31361634..31361656, - |
| 1.82e-121 | FFCP PHASE1:Hg19::chr16:31361634..31361656,-#_ef16d0912cdc8fbc377f68c0ab5d1482 | p@chr16:31361634..31361656, - |
| 4.54e-121 | FFCP PHASE1:Hg19::chr9:134530818..134530849,-#_bc9823466c62e46bf2bd8cf1880b59be | p@chr9:134530818..134530849, - |
| 4.54e-121 | FFCP PHASE2:Hg19::chr9:134530818..134530849,-#_bc9823466c62e46bf2bd8cf1880b59be | p@chr9:134530818..134530849, - |
| 5.26e-121 | FFCP PHASE1:Hg19::chr18:74843308..74843321,-#_39acf080b8020207ddd1a2ebcf04aa17 | p@chr18:74843308..74843321, - |
| 5.26e-121 | FFCP PHASE2:Hg19::chr18:74843308..74843321,-#_39acf080b8020207ddd1a2ebcf04aa17 | p@chr18:74843308..74843321, - |
| 8.58e-121 | FFCP PHASE1:Hg19::chr9:137264714..137264749,-#_7cfb8c8d8d01ecb4f0b976e99b536adb | p@chr9:137264714..137264749, - |
| 8.58e-121 | FFCP PHASE2:Hg19::chr9:137264714..137264749,-#_7cfb8c8d8d01ecb4f0b976e99b536adb | p@chr9:137264714..137264749, - |
| 1.22e-120 | FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_17b14d744b28faa9ae278ebd6d69fa1b | p@chr2:145429606..145429658, + |
| 1.22e-120 | FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_17b14d744b28faa9ae278ebd6d69fa1b | p@chr2:145429606..145429658, + |
| 1.47e-120 | FFCP PHASE2:Hg19::chr8:116588888..116588904,+#_0007f62e8e5e86d0dd15bb79595b9539 | p@chr8:116588888..116588904, + |
| 1.47e-120 | FFCP PHASE1:Hg19::chr1:155959853..155959881,-#_0007f62e8e5e86d0dd15bb79595b9539 | p11@ARHGEF2 |
