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{{UBERON
{{UBERON
|id=UBERON:0007297
|alt_id=
|name=presumptive pronephric mesoderm
|namespace=
|def=
|xref=EFO:0003619;;TAO:0001070;;ZFA:0001070
|is_a=UBERON:0006598
|synonym="nephron primordium" EXACT [ZFA:0001070]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007297
|is_a=UBERON:0006598
|is_obsolete=
|located_in=
|located_in=
|name=presumptive pronephric mesoderm
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="nephron primordium" EXACT [ZFA:0001070]
|union_of=
|xref=EFO:0003619;;TAO:0001070;;ZFA:0001070
}}
}}

Revision as of 11:43, 12 September 2014

Name:presumptive pronephric mesoderm
Xrefs:
links:

EFO:0003619
TAO:0001070

ZFA:0001070
Synonyms: "nephron primordium" EXACT [ZFA:0001070]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006598(presumptive structure)



Children

develops from:UBERON:0005721 (pronephric mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
4.54e-44FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:26688157..26688159, -
4.54e-44FFCP PHASE1:Mm9::chr7:25565920..25565950,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr7:25565920..25565950, -
4.54e-44FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:35930667..35930691, +
4.54e-44FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379065..21379072, -
4.54e-44FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:90155722..90155743, +
4.54e-44FFCP PHASE2:Mm9::chr13:21378927..21378932,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21378927..21378932, -
4.54e-44FFCP PHASE2:Mm9::chr12:16663110..16663116,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Ntsr2
4.54e-44FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p11@P4ha2
4.54e-44FFCP PHASE2:Mm9::chr11:17224952..17224968,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:17224952..17224968, +
4.54e-44FFCP PHASE2:Mm9::chr4:138824620..138824627,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr4:138824620..138824627, +
4.54e-44FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:160347529..160347538, +
4.54e-44FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p4@Ido1
4.54e-44FFCP PHASE2:Mm9::chr12:110131571..110131579,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p15@Wars
4.54e-44FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:90155722..90155743, +
4.54e-44FFCP PHASE1:Mm9::chr11:63779573..63779582,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:63779573..63779582, +
4.54e-44FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr10:91753336..91753348, -
4.54e-44FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:25706249..25706254, +
4.54e-44FFCP PHASE2:Mm9::chr13:21379430..21379437,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379430..21379437, -
4.54e-44FFCP PHASE1:Mm9::chr9:65941913..65941923,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:65941913..65941923, -
4.54e-44FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:54678902..54678911, -
4.54e-44FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:26688157..26688159, -
4.54e-44FFCP PHASE1:Mm9::chr4:106731469..106731481,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr4:106731469..106731481, -
4.54e-44FFCP PHASE2:Mm9::chr2:164479326..164479336,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:164479326..164479336, +
4.54e-44FFCP PHASE1:Mm9::chr2:160573108..160573123,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:160573108..160573123, +
4.54e-44FFCP PHASE2:Mm9::chrX:156776465..156776473,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:156776465..156776473, -
4.54e-44FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:75798114..75798125, -
4.54e-44FFCP PHASE1:Mm9::chr1:18213651..18213663,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p1@Defb44-ps
4.54e-44FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:96150839..96150842, -
4.54e-44FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:110773718..110773729, +
4.54e-44FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:75329148..75329155, +
4.54e-44FFCP PHASE2:Mm9::chr1:89597818..89597827,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:89597818..89597827, +
4.54e-44FFCP PHASE1:Mm9::chr9:35651788..35651804,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p1@9230110F15Rik
4.54e-44FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p5@9230104L09Rik
4.54e-44FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:34107562..34107572, -
4.54e-44FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@uc007mmw.1
4.54e-44FFCP PHASE1:Mm9::chr7:31507623..31507631,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p4@Atp4a
4.54e-44FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:87936238..87936249, +
4.54e-44FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:63611214..63611229, +
4.54e-44FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr16:22547027..22547063, +
4.54e-44FFCP PHASE2:Mm9::chr13:21379306..21379315,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379306..21379315, -
4.54e-44FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p15@Pgap2
4.54e-44FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:75798157..75798162, -
4.54e-44FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:130496372..130496393, -
4.54e-44FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr16:23308182..23308185, +
4.54e-44FFCP PHASE2:Mm9::chr5:77645280..77645295,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:77645280..77645295, -
4.54e-44FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:96014490..96014496, +
4.54e-44FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Lcn12
4.54e-44FFCP PHASE1:Mm9::chr2:148625223..148625234,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:148625223..148625234, +
4.54e-44FFCP PHASE1:Mm9::chr5:31379486..31379501,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379486..31379501, +
4.54e-44FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:160573108..160573123, +
4.54e-44FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379372..21379404, +
4.54e-44FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:23045782..23045791, +
4.54e-44FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:34107586..34107593, -
4.54e-44FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379159..21379162, -
4.54e-44FFCP PHASE1:Mm9::chr7:105313229..105313234,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p17@Capn5
4.54e-44FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379845..31379855, +
4.54e-44FFCP PHASE1:Mm9::chr13:24270118..24270122,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:24270118..24270122, -
4.54e-44FFCP PHASE1:Mm9::chr10:116399500..116399516,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr10:116399500..116399516, +
4.54e-44FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p9@Tecta
4.54e-44FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:50280199..50280211, +
4.54e-44FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:91107095..91107103, +
4.54e-44FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:88272459..88272484, -

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