FFCP PHASE1:Hg19::chrX:100333858..100333876,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59353 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25864 | |||
|TSSclassifier=weak | |||
|UniProt=B4DN33 | |||
|association_with_transcript=0bp_to_ENST00000444892_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_TMEM35_5end | |||
|id=chrX:100333858..100333876,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.09e-18!180;CL:0000393!3.16e-16!60;CL:0000211!3.16e-16!60;CL:0000192!7.82e-16!42;CL:0000514!7.82e-16!42;CL:0000183!4.22e-15!59;CL:0000680!1.86e-14!57;CL:0000056!1.86e-14!57;CL:0000355!1.86e-14!57;CL:0000187!5.18e-14!54;CL:0000359!5.70e-13!32;CL:0000222!8.84e-11!119;CL:0000057!1.10e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.03e-13;32!CL:0000192;1.04e-12;43!CL:0000393;5.68e-08;61!CL:0000211;5.68e-08;61!CL:0000187;4.09e-07;55!CL:0002139;5.82e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.59e-17,43;CL:0000514,1.59e-17,43;CL:0000393,3.02e-16,61;CL:0000211,3.02e-16,61;CL:0000680,2.18e-14,58;CL:0000056,2.18e-14,58;CL:0000355,2.18e-14,58;CL:0000187,6.76e-14,55;CL:0000359,6.76e-14,32;CL:0000222,1.28e-11,121;CL:0000057,9.89e-08,76;CL:0002139,6.08e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;1.04e-12;43!CL:0000355;1.89e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.34e-20;32!UBERON:0003528;3.29e-20;34!UBERON:0002020;3.29e-20;34!UBERON:0001893;5.77e-20;34!UBERON:0002791;5.99e-20;32!UBERON:0002780;8.57e-19;41!UBERON:0001890;8.57e-19;41!UBERON:0000073;4.08e-18;53!UBERON:0002616;4.08e-18;53!UBERON:0000956;4.13e-18;25!UBERON:0000203;4.13e-18;25!UBERON:0002619;1.14e-17;22!UBERON:0001950;2.44e-16;20!UBERON:0001017;4.59e-13;75!UBERON:0004573;6.90e-13;33!UBERON:0004571;6.90e-13;33!UBERON:0000955;7.76e-13;68!UBERON:0001637;8.76e-13;42!UBERON:0003509;8.76e-13;42!UBERON:0004572;8.76e-13;42!UBERON:0001016;2.05e-11;83!UBERON:0007500;4.93e-11;56!UBERON:0001981;4.93e-11;56!UBERON:0004537;4.93e-11;56!UBERON:0000055;2.55e-10;65!UBERON:0002049;4.00e-10;75!UBERON:0007798;4.00e-10;75!UBERON:0000947;5.30e-09;21!UBERON:0010191;5.30e-09;21!UBERON:0011216;5.26e-08;132!UBERON:0001135;2.16e-07;15!UBERON:0010314;2.45e-07;132!UBERON:0004733;2.78e-07;12!UBERON:0002028;2.78e-07;12!UBERON:0004732;3.38e-07;13!UBERON:0003914;4.94e-07;74 | |||
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| |||
|short_description=p1@TMEM35 | |||
}} |
Revision as of 06:18, 23 January 2014
Short description: | p1@TMEM35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM35_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000444892_5end |
EntrezGene: | TMEM35 |
HGNC: | 25864 |
UniProt: | B4DN33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.59e-17 | 43 |
smooth muscle myoblast | 1.59e-17 | 43 |
electrically responsive cell | 3.02e-16 | 61 |
electrically active cell | 3.02e-16 | 61 |
muscle precursor cell | 2.18e-14 | 58 |
myoblast | 2.18e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.18e-14 | 58 |
muscle cell | 6.76e-14 | 55 |
vascular associated smooth muscle cell | 6.76e-14 | 32 |
mesodermal cell | 1.28e-11 | 121 |
fibroblast | 9.89e-08 | 76 |
endothelial cell of vascular tree | 6.08e-07 | 24 |