FFCP PHASE1:Hg19::chrX:26933473..26933478,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1203 | |||
|description=CAGE_peak_at_chrX:26933473..26933478,+ | |||
|id=chrX:26933473..26933478,+ | |||
|ontology_enrichment_celltype=CL:0000071!8.11e-84!18;CL:0002546!8.11e-84!18;CL:0002139!2.18e-62!24;CL:0000115!3.66e-42!35;CL:0002078!1.79e-38!44;CL:0002543!1.27e-37!6;CL:0002144!2.26e-28!3;CL:1000413!8.90e-26!9;CL:0002544!2.93e-25!6;CL:0000213!4.23e-25!57;CL:0000215!4.23e-25!57;CL:0000076!6.59e-23!62;CL:0000222!1.88e-19!119;CL:0002618!8.35e-13!3;CL:0000220!7.41e-08!246;CL:0002321!9.04e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002544;6.91e-50;6!CL:0000071;6.64e-46;18!CL:0002139;1.29e-34;24!CL:1000413;1.31e-33;9!CL:0002078;1.12e-16;45!CL:0000115;2.41e-16;36!CL:0000213;2.07e-12;58!CL:0000215;2.07e-12;58!CL:0002144;2.31e-12;3!CL:0000515;2.31e-12;3!CL:0000056;1.32e-09;4!CL:0000076;2.33e-07;63!CL:0002543;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002544,6.35e-50,6;CL:0000071,6.05e-46,18;CL:0002546,6.05e-46,18;CL:0002139,1.20e-34,24;CL:1000413,1.24e-33,9;CL:0000115,2.54e-23,36;CL:0002078,8.89e-19,45;CL:0000213,1.09e-14,58;CL:0000215,1.09e-14,58;CL:0000076,1.45e-13,63;CL:0002144,2.31e-12,3;CL:0000222,3.06e-10,121;CL:0000515,1.44e-09,4;CL:0002543,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.64e-46;18!CL:0000515;1.32e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.11e-84!18;UBERON:0004638!8.11e-84!18;UBERON:0004852!8.11e-84!18;UBERON:0000487!3.10e-68!22;UBERON:0006914!8.14e-60!25;UBERON:0001915!2.26e-28!3;UBERON:0001982!2.26e-28!3;UBERON:0001981!1.30e-27!60;UBERON:0007500!1.30e-27!60;UBERON:0004537!1.30e-27!60;UBERON:0006965!1.30e-27!60;UBERON:0003915!8.90e-26!9;UBERON:0004700!8.90e-26!9;UBERON:0001917!8.90e-26!9;UBERON:0001638!4.28e-25!9;UBERON:0003920!4.28e-25!9;UBERON:0004582!4.28e-25!9;UBERON:0000055!1.02e-23!69;UBERON:0002049!2.00e-20!79;UBERON:0007798!2.00e-20!79;UBERON:0004872!4.51e-19!84;UBERON:0003914!3.19e-17!118;UBERON:0000490!2.13e-16!138;UBERON:0004535!5.14e-14!110;UBERON:0001009!1.40e-13!113;UBERON:0000025!2.32e-09!194;UBERON:0003081!3.91e-08!216;UBERON:0002066!4.86e-08!5;UBERON:0000483!1.28e-07!309;UBERON:0000119!1.63e-07!312;UBERON:0001637!1.74e-07!42;UBERON:0003509!1.74e-07!42;UBERON:0004572!1.74e-07!42;UBERON:0000947!2.39e-07!21;UBERON:0010191!2.39e-07!21;UBERON:0004111!5.21e-07!241;UBERON:0004573!6.73e-07!33;UBERON:0004571!6.73e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.64e-46;18!UBERON:0001986;6.64e-46;18!UBERON:0004852;6.64e-46;18!UBERON:0000487;1.07e-37;22!UBERON:0003915;1.31e-33;9!UBERON:0004700;1.31e-33;9!UBERON:0001917;1.31e-33;9!UBERON:0006914;2.93e-33;25!UBERON:0000490;6.83e-26;33!UBERON:0000947;6.38e-15;21!UBERON:0010191;6.38e-15;21!UBERON:0010523;2.31e-12;3!UBERON:0001915;2.31e-12;3!UBERON:0001982;2.31e-12;3!UBERON:0007500;2.48e-11;56!UBERON:0001981;2.48e-11;56!UBERON:0004537;2.48e-11;56!UBERON:0004573;3.78e-10;33!UBERON:0004571;3.78e-10;33!UBERON:0001637;4.34e-09;42!UBERON:0003509;4.34e-09;42!UBERON:0004572;4.34e-09;42!UBERON:0000055;1.34e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.05e-46,18;UBERON:0001986,6.05e-46,18;UBERON:0004852,6.05e-46,18;UBERON:0000487,9.92e-38,22;UBERON:0003915,1.24e-33,9;UBERON:0004700,1.24e-33,9;UBERON:0001917,1.24e-33,9;UBERON:0006914,2.74e-33,25;UBERON:0000947,6.23e-15,21;UBERON:0010191,6.23e-15,21;UBERON:0007500,1.89e-14,59;UBERON:0001981,1.89e-14,59;UBERON:0004537,1.89e-14,59;UBERON:0006965,1.89e-14,59;UBERON:0000055,1.33e-12,68;UBERON:0010523,2.31e-12,3;UBERON:0001915,2.31e-12,3;UBERON:0001982,2.31e-12,3;UBERON:0002049,4.79e-11,78;UBERON:0007798,4.79e-11,78;UBERON:0004872,2.09e-10,83;UBERON:0004573,8.77e-10,33;UBERON:0004571,8.77e-10,33;UBERON:0000490,1.95e-08,148;UBERON:0004535,5.11e-08,109;UBERON:0001637,7.76e-08,42;UBERON:0003509,7.76e-08,42;UBERON:0004572,7.76e-08,42;UBERON:0001009,8.20e-08,112;UBERON:0003914,1.71e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57153536943422,0.860234595106124,2.42998351125316,1.13061588384802,0,0,0.417989933073621,0,0,0,0.805658634218294,2.28081631715554,0.732186172644509,0,0,0.357198913136319,0,0.112611480483322,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02693829334611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:26933473..26933478,+ | |||
}} |
Revision as of 05:08, 23 January 2014
Short description: | p@chrX:26933473..26933478, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:26933473..26933478, + |
Coexpression cluster: | C1203_Endothelial_placenta_choriocarcinoma_Renal_Hair_Fibroblast_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic endothelial cell | 6.35e-50 | 6 |
blood vessel endothelial cell | 6.05e-46 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.05e-46 | 18 |
endothelial cell of vascular tree | 1.20e-34 | 24 |
endothelial cell of artery | 1.24e-33 | 9 |
endothelial cell | 2.54e-23 | 36 |
meso-epithelial cell | 8.89e-19 | 45 |
lining cell | 1.09e-14 | 58 |
barrier cell | 1.09e-14 | 58 |
squamous epithelial cell | 1.45e-13 | 63 |
capillary endothelial cell | 2.31e-12 | 3 |
mesodermal cell | 3.06e-10 | 121 |
skeletal muscle myoblast | 1.44e-09 | 4 |
vein endothelial cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.05e-46 | 18 |
endothelium | 6.05e-46 | 18 |
cardiovascular system endothelium | 6.05e-46 | 18 |
simple squamous epithelium | 9.92e-38 | 22 |
endothelial tube | 1.24e-33 | 9 |
arterial system endothelium | 1.24e-33 | 9 |
endothelium of artery | 1.24e-33 | 9 |
squamous epithelium | 2.74e-33 | 25 |
aorta | 6.23e-15 | 21 |
aortic system | 6.23e-15 | 21 |
epithelial tube open at both ends | 1.89e-14 | 59 |
blood vessel | 1.89e-14 | 59 |
blood vasculature | 1.89e-14 | 59 |
vascular cord | 1.89e-14 | 59 |
vessel | 1.33e-12 | 68 |
microcirculatory vessel | 2.31e-12 | 3 |
endothelium of capillary | 2.31e-12 | 3 |
capillary | 2.31e-12 | 3 |
vasculature | 4.79e-11 | 78 |
vascular system | 4.79e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 2.09e-10 | 83 |
systemic artery | 8.77e-10 | 33 |
systemic arterial system | 8.77e-10 | 33 |
unilaminar epithelium | 1.95e-08 | 148 |
cardiovascular system | 5.11e-08 | 109 |
artery | 7.76e-08 | 42 |
arterial blood vessel | 7.76e-08 | 42 |
arterial system | 7.76e-08 | 42 |
circulatory system | 8.20e-08 | 112 |
epithelial tube | 1.71e-07 | 117 |