FFCP PHASE1:Hg19::chrX:19688475..19688492,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13867 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z6E8 | |||
|association_with_transcript=0bp_to_ENST00000541422,uc011mje.1_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_26_at_SH3KBP1_5end | |||
|id=chrX:19688475..19688492,- | |||
|ontology_enrichment_celltype=CL:0000188!8.36e-09!9;CL:0002551!2.02e-08!6;CL:0002552!1.61e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002363;3.94e-29;2!CL:0002552;1.81e-26;5!CL:0002367;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,4.55e-29,2;CL:0000008,4.55e-29,2;CL:0002552,1.81e-26,5;CL:0002367,2.87e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000008;3.94e-29;2!UBERON:0003124;5.56e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.11e-13!95;UBERON:0000161!7.44e-10!35;UBERON:0001046!3.83e-09!19;UBERON:0000162!1.12e-08!14;UBERON:0001353!1.12e-08!14;UBERON:0000163!1.12e-08!14;UBERON:0006866!1.12e-08!14;UBERON:0000164!1.12e-08!14;UBERON:0000931!1.12e-08!14;UBERON:0003937!1.42e-08!12;UBERON:0005399!1.42e-08!12;UBERON:0004122!5.55e-08!15;UBERON:0002367!3.60e-07!11;UBERON:0010147!3.60e-07!11;UBERON:0009846!3.60e-07!11;UBERON:0003353!3.60e-07!11;UBERON:0004902!3.60e-07!11;UBERON:0003820!3.60e-07!11;UBERON:0009847!3.60e-07!11;UBERON:0001444!5.85e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;3.94e-29;2!UBERON:0001777;3.94e-29;2!UBERON:0001828;8.26e-17;8!UBERON:0007029;1.15e-15;1!UBERON:0003891;4.23e-15;4!UBERON:0000964;4.23e-15;4!UBERON:0010409;4.23e-15;4!UBERON:0000161;2.53e-12;19!UBERON:0000166;2.53e-12;19!UBERON:0003729;1.40e-10;13!UBERON:0000033;6.81e-10;50!UBERON:0007811;1.08e-09;52!UBERON:0001801;1.17e-09;14!UBERON:0001444;1.59e-09;48!UBERON:0000153;5.36e-09;54!UBERON:0000165;1.92e-08;28!UBERON:0005969;2.67e-08;2!UBERON:0003956;2.67e-08;2!UBERON:0000019;2.95e-07;19!UBERON:0000047;2.95e-07;19!UBERON:0004088;2.95e-07;19!UBERON:0010230;2.95e-07;19!UBERON:0000344;4.61e-07;20!UBERON:0000970;6.43e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,4.55e-29,2;UBERON:0001777,4.55e-29,2;UBERON:0001828,8.26e-17,8;UBERON:0007029,7.46e-16,1;UBERON:0003891,4.55e-15,4;UBERON:0000964,4.55e-15,4;UBERON:0010409,4.55e-15,4;UBERON:0004348,4.55e-15,4;UBERON:0005427,4.55e-15,4;UBERON:0001444,1.13e-13,49;UBERON:0000033,6.67e-12,56;UBERON:0000153,1.06e-10,62;UBERON:0007811,1.06e-10,62;UBERON:0000166,1.11e-10,22;UBERON:0003729,1.40e-10,13;UBERON:0001801,1.25e-09,14;UBERON:0003102,1.67e-08,99;UBERON:0005969,2.87e-08,2;UBERON:0003956,2.87e-08,2;UBERON:0000165,3.68e-08,29;UBERON:0000930,3.68e-08,29;UBERON:0000344,4.62e-07,20;UBERON:0000019,6.70e-07,20;UBERON:0000047,6.70e-07,20;UBERON:0010312,6.70e-07,20;UBERON:0004088,6.70e-07,20;UBERON:0010230,6.70e-07,20;UBERON:0003072,6.70e-07,20;UBERON:0004128,6.70e-07,20;UBERON:0003071,6.70e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0.312160076830321,2.2818872861778,0.448346041655403,0.352303495931295,0,0.280901613404497,2.24569588380383,0,3.40975077880026,2.37600571456411,0.494533858557114,0,0,0.505008341862199,0.625592599359821,0.831192346452549,0,0,0,0,0,0,0.423863802319124,0,0.309157587715317,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0,0,1.95484983186195,2.07986957055916,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.34444334449382,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.537101224341368,0.290033387828457,0.170453254832202,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,1.13841952129715,0.349934720244983,0.192444225451024,0,0,2.35359501941948,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0.46112780877612,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0,0,0.19351266257817,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0,0,0,0,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.466311601748341,0.295710299979268,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,9.1363441267518,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0.801711364730253,0,0.17071847709395,1.38251932362818,0,0,0.255640214277473,0.423387050190929,0,0,0,0,0.392600934460972,0,0,0.205325613712494,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,1.12337913364836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p26@SH3KBP1 | |||
}} |
Revision as of 05:01, 23 January 2014
Short description: | p26@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_SH3KBP1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000541422, uc011mje.1_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | B7Z6E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 4.55e-29 | 2 |
migratory cranial neural crest cell | 4.55e-29 | 2 |
fibroblast of gingiva | 1.81e-26 | 5 |
trabecular meshwork cell | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 4.55e-29 | 2 |
substantia propria of cornea | 4.55e-29 | 2 |
gingiva | 8.26e-17 | 8 |
surface | 7.46e-16 | 1 |
stroma | 4.55e-15 | 4 |
cornea | 4.55e-15 | 4 |
eye surface | 4.55e-15 | 4 |
optic eminence | 4.55e-15 | 4 |
corneal primordium | 4.55e-15 | 4 |
subdivision of head | 1.13e-13 | 49 |
head | 6.67e-12 | 56 |
anterior region of body | 1.06e-10 | 62 |
craniocervical region | 1.06e-10 | 62 |
oral opening | 1.11e-10 | 22 |
mouth mucosa | 1.40e-10 | 13 |
anterior segment of eyeball | 1.25e-09 | 14 |
surface structure | 1.67e-08 | 99 |
reticulum trabeculare | 2.87e-08 | 2 |
aqueous drainage system | 2.87e-08 | 2 |
mouth | 3.68e-08 | 29 |
stomodeum | 3.68e-08 | 29 |
mucosa | 4.62e-07 | 20 |
camera-type eye | 6.70e-07 | 20 |
simple eye | 6.70e-07 | 20 |
immature eye | 6.70e-07 | 20 |
ocular region | 6.70e-07 | 20 |
eyeball of camera-type eye | 6.70e-07 | 20 |
optic cup | 6.70e-07 | 20 |
optic vesicle | 6.70e-07 | 20 |
eye primordium | 6.70e-07 | 20 |