FFCP PHASE1:Hg19::chr9:136576527..136576550,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:136576527..136576550,- | |||
|id=chr9:136576527..136576550,- | |||
|ontology_enrichment_celltype=CL:0000680!6.13e-16!57;CL:0000056!6.13e-16!57;CL:0000355!6.13e-16!57;CL:0000187!6.98e-13!54;CL:0000183!2.97e-12!59;CL:0000055!2.60e-11!180;CL:0000393!7.47e-11!60;CL:0000211!7.47e-11!60;CL:0000222!1.31e-10!119;CL:0002494!2.19e-09!16;CL:0000188!9.82e-09!9;CL:0000515!5.27e-08!4;CL:0002594!1.27e-07!4;CL:0000220!9.83e-07!246;CL:0002548!9.85e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000056;8.26e-25;4!CL:0000515;4.66e-19;3!CL:0000680;2.80e-14;7!CL:0002321;2.79e-10;15!CL:0000632;3.68e-09;3!CL:0000222;4.27e-08;1!CL:0000228;1.74e-07;1!CL:1001319;1.74e-07;1!CL:1000600;1.74e-07;1!CL:0002372;1.74e-07;1!CL:0000737;4.47e-07;4!CL:0002594;4.47e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.86e-25,4;CL:0000632,4.73e-09,3;CL:1001319,1.01e-07,1;CL:1000600,1.01e-07,1;CL:0000228,1.80e-07,1;CL:0002372,1.80e-07,1;CL:0002594,3.18e-07,4;CL:0000737,5.06e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;8.26e-25;4!UBERON:0000358;8.27e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;8.27e-08;1!DOID:3369;1.74e-07;1!DOID:3571;1.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,7.76e-08,1;DOID:3369,1.48e-07,1;DOID:3571,2.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.32e-14!63;UBERON:0001015!1.32e-14!63;UBERON:0000383!1.32e-14!63;UBERON:0000486!2.16e-14!82;UBERON:0001134!2.55e-14!61;UBERON:0002036!2.55e-14!61;UBERON:0003082!2.55e-14!61;UBERON:0004290!2.34e-13!70;UBERON:0000490!2.87e-12!138;UBERON:0000914!1.22e-11!83;UBERON:0002329!1.22e-11!83;UBERON:0003077!1.22e-11!83;UBERON:0003059!1.22e-11!83;UBERON:0007282!1.22e-11!83;UBERON:0009618!1.22e-11!83;UBERON:0007285!1.22e-11!83;UBERON:0005256!5.43e-10!143;UBERON:0004872!2.89e-08!84;UBERON:0002100!4.60e-08!216;UBERON:0001310!1.27e-07!4;UBERON:0003688!6.90e-07!6;UBERON:0002358!6.90e-07!6;UBERON:0003684!6.90e-07!6;UBERON:0001178!6.90e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;8.27e-08;1!UBERON:0003703;8.27e-08;1!UBERON:0001174;8.27e-08;1!UBERON:0004914;8.27e-08;1!UBERON:0004645;1.74e-07;1!UBERON:0001256;1.74e-07;1!UBERON:0001259;1.74e-07;1!UBERON:0001310;4.47e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,8.84e-08,1;UBERON:0003703,8.84e-08,1;UBERON:0001174,8.84e-08,1;UBERON:0004914,8.84e-08,1;UBERON:0004645,1.01e-07,1;UBERON:0001256,1.01e-07,1;UBERON:0001259,1.01e-07,1;UBERON:0001310,3.18e-07,4 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,1.06748995729705,0.24666754841716,0.622422070799533,0.67355336034844,0.490385709340376,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0.910161361938026,3.59309070908119,0,0.125118519871964,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,3.57656445851882,0.845302752556,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,1.44781306667579,1.84928690295345,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0,0,1.15325234330131,0.511707249066704,0.64341568457443,0,0.308419387605311,0.532685175939381,0,0.519254429183621,0,0,0.40101294060657,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0.495854746082934,0.384380134730212,0.893288987462089,0.10115778085555,0,0,0,0,0.532306030317022,0,0.18532421910392,0.572499546967965,0,0.632758849437452,0.762520775695299,0,0,0,0,0.179872457583315,0.274537029736055,0,0.606547444719948,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,1.62328301570163,0.6196469961995,0.845086807596724,0.143411352204052,0.294747123039363,1.78335525740625,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.86101074534246,0,1.7737206141467,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0.19980960958213,0,0,0,0,0.248505071130865,0,3.39760515184035,3.87030531355633,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,3.59190574687462,0,1.19271615249795,0.453248366080503,0,0,0,0,0,1.40963004463334,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0.467426619694449,0,0,0,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0,0,0.265841714557995,1.04349012362347,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0.398095888698616,3.20022211730523,0,0.336749488765919,10.0947918582921,0,0,0,0.226705925512272,3.47283711485751,4.64999738562288,0,0,0,1.59020231351293,0.192914038270915,0.168942440653073,0,0,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.924205329202706,0,0,0,0,0,0,0,2.62035068016155,2.06998520703863,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,1.79087190944144,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr9:136576527..136576550,- | |||
}} |
Revision as of 03:57, 23 January 2014
Short description: | p@chr9:136576527..136576550, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:136576527..136576550, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.86e-25 | 4 |
hepatic stellate cell | 4.73e-09 | 3 |
bladder cell | 1.01e-07 | 1 |
lower urinary tract cell | 1.01e-07 | 1 |
multinucleate cell | 1.80e-07 | 1 |
myotube | 1.80e-07 | 1 |
smooth muscle cell of the umbilical artery | 3.18e-07 | 4 |
striated muscle cell | 5.06e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 8.84e-08 | 1 |
extrahepatic bile duct | 8.84e-08 | 1 |
common bile duct | 8.84e-08 | 1 |
duodenal papilla | 8.84e-08 | 1 |
urinary bladder urothelium | 1.01e-07 | 1 |
wall of urinary bladder | 1.01e-07 | 1 |
mucosa of urinary bladder | 1.01e-07 | 1 |
umbilical artery | 3.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.76e-08 | 1 |
peripheral primitive neuroectodermal tumor | 1.48e-07 | 1 |
liver cancer | 2.80e-07 | 1 |