FFCP PHASE1:Hg19::chr9:113801048..113801064,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |||
|TSSclassifier=strong | |||
|UniProt=B4DQ18 | |||
|association_with_transcript=-67bp_to_ENST00000538760,uc011lwo.1_5end | |||
|description=CAGE_peak_8_at_LPAR1_5end | |||
|id=chr9:113801048..113801064,- | |||
|ontology_enrichment_celltype=CL:0000055!3.87e-20!180;CL:0000057!1.44e-19!75;CL:0002620!4.10e-09!23;CL:0000680!9.30e-09!57;CL:0000056!9.30e-09!57;CL:0000355!9.30e-09!57;CL:0000187!1.33e-07!54;CL:0000192!3.34e-07!42;CL:0000514!3.34e-07!42;CL:0000183!8.58e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.75e-10;23!CL:0000057;9.52e-10;73!CL:0002556;2.73e-08;6!CL:0000499;2.91e-08;28!CL:0002334;2.99e-08;12!CL:0002552;4.35e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.66e-25,76;CL:0002620,2.89e-10,23;CL:0000499,1.59e-08,28;CL:0002556,3.59e-08,6;CL:0000048,3.82e-08,427;CL:0002334,4.84e-08,12;CL:0000723,1.33e-07,433;CL:0002552,5.03e-07,5;CL:0000034,6.41e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.88e-18!83;UBERON:0002329!6.88e-18!83;UBERON:0003077!6.88e-18!83;UBERON:0003059!6.88e-18!83;UBERON:0007282!6.88e-18!83;UBERON:0009618!6.88e-18!83;UBERON:0007285!6.88e-18!83;UBERON:0000475!2.38e-17!365;UBERON:0003102!2.00e-15!95;UBERON:0000486!6.62e-13!82;UBERON:0004290!3.97e-12!70;UBERON:0000468!1.51e-11!659;UBERON:0005256!3.31e-11!143;UBERON:0002100!3.83e-11!216;UBERON:0000481!4.36e-10!347;UBERON:0002385!1.12e-09!63;UBERON:0001015!1.12e-09!63;UBERON:0000383!1.12e-09!63;UBERON:0001134!2.42e-09!61;UBERON:0002036!2.42e-09!61;UBERON:0003082!2.42e-09!61;UBERON:0000467!4.66e-09!625;UBERON:0000480!7.06e-09!626;UBERON:0000075!4.52e-08!13;UBERON:0005944!4.52e-08!13;UBERON:0004288!4.52e-08!13;UBERON:0003089!4.52e-08!13;UBERON:0000479!5.00e-08!787;UBERON:0000062!7.93e-08!511;UBERON:0002050!2.53e-07!605;UBERON:0005423!2.53e-07!605;UBERON:0002199!3.10e-07!45;UBERON:0002416!3.10e-07!45;UBERON:0000923!3.43e-07!604;UBERON:0005291!3.43e-07!604;UBERON:0006598!3.43e-07!604;UBERON:0002532!3.43e-07!604;UBERON:0003129!3.58e-07!11;UBERON:0002204!5.41e-07!167;UBERON:0000922!5.41e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;4.32e-10;16!UBERON:0002384;2.54e-08;198!UBERON:0001758;2.73e-08;6!UBERON:0003672;2.73e-08;6!UBERON:0011137;3.01e-08;11!UBERON:0010323;3.01e-08;11!UBERON:0002097;3.81e-07;41!UBERON:0001828;3.90e-07;8!UBERON:0003129;7.16e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.39e-17,99;UBERON:0000075,9.79e-11,16;UBERON:0002199,4.24e-10,46;UBERON:0002416,4.24e-10,46;UBERON:0011137,2.63e-09,14;UBERON:0002097,4.23e-09,41;UBERON:0010323,1.86e-08,11;UBERON:0007524,3.03e-08,73;UBERON:0001758,3.59e-08,6;UBERON:0003672,3.59e-08,6;UBERON:0002329,6.47e-08,71;UBERON:0003059,6.47e-08,71;UBERON:0007282,6.47e-08,71;UBERON:0004290,6.47e-08,71;UBERON:0009618,6.47e-08,71;UBERON:0000486,6.94e-08,83;UBERON:0003077,1.13e-07,72;UBERON:0007285,1.13e-07,72;UBERON:0001828,6.51e-07,8;UBERON:0003129,8.95e-07,7 | |||
|phase1_expression=2.54349730978779,1.92690471501885,3.94672331468719,0,1.78784437770915,1.74467704820074,2.53299878168311,0.631719873426831,0.783556884599516,1.22866968250754,0,0.218441372130172,0.527533956456907,1.73272894144065,1.98838425436749,0,0,2.19093027116212,1.95173119516203,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0.61130724598361,0.903106483949403,0.944529375764151,0.393364276848904,0,0.154816123316076,0,0,0.739508020333575,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0.671746422719773,1.29557466407592,0.77272670290256,0.145398238779565,0,0,0,1.23350366406548,1.23882548358041,0.28769239232215,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0,0,0,0.659702600373432,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,2.42159801053347,0.368277635987565,0.632924774881769,0.211255286311942,0,0,0.22465726229299,0.750884464207532,0.803627933485401,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,2.00535164254356,2.75208386025565,1.5905718941022,1.94653948121054,0.189069634328136,0,0,0.458426764241994,0.364295288292542,0.370784442784429,0.324547393654683,0.348259474598534,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,1.49091585508596,2.02608818663328,0.529636723252875,1.72101972449288,1.77334191099179,0.560677600142307,0,0.24666754841716,0.622422070799533,0.404132016209064,0.326923806226917,1.96764655938411,0,1.40592859100278,0.936480230490962,0.570471821544449,2.24173020827702,2.46612447151906,1.29498355494505,1.68540968042698,4.69554593886255,4.05353247128834,6.71617577642475,2.37600571456411,6.67620709052104,1.82032272387605,0.718618141816238,6.73344455816265,4.8796222750066,7.20366700258876,5.70670907145089,2.14541457059314,5.10809400282429,0.113432183160021,1.61450672119976,1.70845911054854,0.847727604638247,0.600182192168805,1.8549455262919,1.03056216018252,1.67505170698431,1.18143432568886,1.16924406193438,1.26216887122057,1.38074847963449,2.42469085228218,1.42003837006646,1.5112814734146,1.69560592310488,1.15956511897978,2.45471508531751,0.573609190778008,0,0,0.232387885739037,0,0,0,1.56449532329816,1.28648187638577,4.14404764057442,2.3218396401599,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0.703702806881416,0.277765335475589,3.25808305310325,1.03993478527958,1.44331342025273,0.115930404975077,0.352226082707465,0,0,0,0,0,0.492434012174795,1.17002132569619,0.445893486866185,2.81201501960331,1.84780341018745,0.992425680696705,0.626909658919938,0.871901815541886,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,2.46688385559794,1.30788020649984,2.56684000373325,0.904902010304444,0,0.845302752556,1.59562869950922,2.08014873822732,1.80045161983499,0,0.799266537048298,0.714889968290738,0.542621605391443,1.64648067356154,1.62868092146868,0,0.791951872933429,0.904318131178758,0.871533458600294,0.199945982364114,0,1.00451418286425,4.21667878966063,0.479249710983165,2.29723871668228,1.42636905040718,1.73737568001095,2.67119219315498,1.96967059563885,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,2.57652132610194,2.50085260529839,0.813795071099207,0.623912584592421,1.96271887676878,1.89242898040722,1.52283839490527,1.50473049863859,2.27407504055985,1.03473071292505,2.65690239414175,0.553107505625109,3.64911180765948,0.391602314925481,0.343143423810856,0,0.215714200818617,0,0,0,0,2.97729369382532,0.920771839728375,1.12264037773229,2.94720043288112,2.55853624533352,1.60853921143608,1.48418066444991,2.00472601943452,1.77561725313127,3.77784917663522,1.03850885836724,1.04589340613963,0.483437798366489,0.200506470303285,0.368323955743585,2.41110341145674,1.82091168006717,2.49136388422906,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,0,0.812839312631559,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0.640986253728404,0.41254749960294,0,0,1.6068392984416,0.96670718292122,1.54048617114644,0.614014698904518,0.413509717453592,2.36324538710202,2.46528379654188,0.426133137080504,0.356128142586949,0.330569830721956,0.768760269460425,1.14851441245126,0.910420027699949,1.39453664789186,1.88887408098384,0.6970372701606,0,0.532306030317022,2.60979897622522,0.9266210955196,0.572499546967965,1.48863347743867,3.16379424718726,1.14378116354295,1.79128453917934,0.42793898803392,0.636406495851874,0.78494864019923,1.43897966066652,1.37268514868027,2.00281083987667,0.808729926293264,0,0.842516912477962,0.975267478179181,2.19342140668156,0,2.32049849393576,0.707027159768564,0,1.10273068709225,1.99031692572366,0.876901770507525,0.578775534266688,0.655894752046633,1.42037263873893,0.92947049429925,1.97186921772569,1.43411352204052,0.982490410131212,1.07001315444375,1.77380532035299,2.74439925886963,3.29294892959902,0.75894634753143,0.699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| |||
|short_description=p8@LPAR1 | |||
}} |
Revision as of 02:45, 23 January 2014
Short description: | p8@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LPAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENST00000538760, uc011lwo.1_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | B4DQ18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.66e-25 | 76 |
skin fibroblast | 2.89e-10 | 23 |
stromal cell | 1.59e-08 | 28 |
fibroblast of periodontium | 3.59e-08 | 6 |
multi fate stem cell | 3.82e-08 | 427 |
preadipocyte | 4.84e-08 | 12 |
somatic stem cell | 1.33e-07 | 433 |
fibroblast of gingiva | 5.03e-07 | 5 |
stem cell | 6.41e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.39e-17 | 99 |
subdivision of skeletal system | 9.79e-11 | 16 |
integument | 4.24e-10 | 46 |
integumental system | 4.24e-10 | 46 |
axial skeletal system | 2.63e-09 | 14 |
skin of body | 4.23e-09 | 41 |
cranial skeletal system | 1.86e-08 | 11 |
dense mesenchyme tissue | 3.03e-08 | 73 |
periodontium | 3.59e-08 | 6 |
dentition | 3.59e-08 | 6 |
somite | 6.47e-08 | 71 |
presomitic mesoderm | 6.47e-08 | 71 |
presumptive segmental plate | 6.47e-08 | 71 |
dermomyotome | 6.47e-08 | 71 |
trunk paraxial mesoderm | 6.47e-08 | 71 |
multilaminar epithelium | 6.94e-08 | 83 |
paraxial mesoderm | 1.13e-07 | 72 |
presumptive paraxial mesoderm | 1.13e-07 | 72 |
gingiva | 6.51e-07 | 8 |
skull | 8.95e-07 | 7 |