FFCP PHASE1:Hg19::chr9:113735810..113735838,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3166 | |||
|TSSclassifier=not | |||
|UniProt=Q92633 | |||
|association_with_transcript=-31bp_to_U78192,Y09479_5end | |||
|description=CAGE_peak_16_at_LPAR1_5end | |||
|id=chr9:113735810..113735838,- | |||
|ontology_enrichment_celltype=CL:0000055!9.97e-10!180;CL:0000057!2.54e-09!75;CL:0000680!5.06e-07!57;CL:0000056!5.06e-07!57;CL:0000355!5.06e-07!57;CL:0000136!7.24e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002552;1.60e-08;5!CL:0000499;3.70e-07;28!CL:0002615;8.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,9.23e-09,5;CL:0000136,2.26e-08,15;CL:0000499,5.20e-07,28;CL:0002615,9.91e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.39e-16!115;UBERON:0000475!2.44e-14!365;UBERON:0000914!5.47e-13!83;UBERON:0002329!5.47e-13!83;UBERON:0003077!5.47e-13!83;UBERON:0003059!5.47e-13!83;UBERON:0007282!5.47e-13!83;UBERON:0009618!5.47e-13!83;UBERON:0007285!5.47e-13!83;UBERON:0000481!1.41e-10!347;UBERON:0000486!6.98e-10!82;UBERON:0004290!8.04e-10!70;UBERON:0000468!6.12e-09!659;UBERON:0002100!9.93e-09!216;UBERON:0000479!1.88e-08!787;UBERON:0002385!3.42e-08!63;UBERON:0001015!3.42e-08!63;UBERON:0000383!3.42e-08!63;UBERON:0000477!3.53e-08!286;UBERON:0001049!3.81e-08!57;UBERON:0005068!3.81e-08!57;UBERON:0006241!3.81e-08!57;UBERON:0007135!3.81e-08!57;UBERON:0005256!6.60e-08!143;UBERON:0001134!6.63e-08!61;UBERON:0002036!6.63e-08!61;UBERON:0003082!6.63e-08!61;UBERON:0003102!1.26e-07!95;UBERON:0002616!1.36e-07!59;UBERON:0000467!3.18e-07!625;UBERON:0000480!4.29e-07!626;UBERON:0000483!5.46e-07!309;UBERON:0000119!8.45e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.53e-12;9!UBERON:0000042;9.53e-12;9!UBERON:0003688;1.75e-10;6!UBERON:0002358;1.75e-10;6!UBERON:0003684;1.75e-10;6!UBERON:0001178;1.75e-10;6!UBERON:0004905;2.02e-09;8!UBERON:0000982;2.02e-09;8!UBERON:0004770;2.02e-09;8!UBERON:0000075;1.76e-08;16!UBERON:0011135;5.41e-08;5!UBERON:0002216;5.41e-08;5!UBERON:0011134;5.41e-08;5!UBERON:0002209;5.41e-08;5!UBERON:0002213;5.41e-08;5!UBERON:0007844;5.41e-08;5!UBERON:0011138;5.41e-08;5!UBERON:0001130;5.41e-08;5!UBERON:0001066;5.41e-08;5!UBERON:0001468;5.41e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.52e-10,6;UBERON:0002358,1.52e-10,6;UBERON:0003684,1.52e-10,6;UBERON:0001178,1.52e-10,6;UBERON:0007023,1.99e-09,114;UBERON:0004905,3.92e-09,8;UBERON:0000982,3.92e-09,8;UBERON:0004770,3.92e-09,8;UBERON:0000075,2.25e-08,16;UBERON:0004457,2.35e-08,12;UBERON:0000042,2.35e-08,12;UBERON:0011135,9.99e-08,5;UBERON:0002216,9.99e-08,5;UBERON:0011134,9.99e-08,5;UBERON:0002209,9.99e-08,5;UBERON:0002213,9.99e-08,5;UBERON:0005856,9.99e-08,5;UBERON:0005866,9.99e-08,5;UBERON:0005863,9.99e-08,5;UBERON:0007844,9.99e-08,5;UBERON:0011138,9.99e-08,5;UBERON:0001130,9.99e-08,5;UBERON:0001066,9.99e-08,5;UBERON:0001468,9.99e-08,5;UBERON:0001049,1.85e-07,56;UBERON:0005068,1.85e-07,56;UBERON:0006241,1.85e-07,56;UBERON:0007135,1.85e-07,56;UBERON:0010314,7.28e-07,132 | |||
|phase1_expression=4.36028110249336,3.21150785836475,6.06103937612676,3.00219895059391,7.15137751083661,5.23403114460221,0,3.15859936713415,0.783556884599516,0,0,0,0,2.10402800032079,2.65117900582333,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0.447830948479849,1.29557466407592,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,1.13477044938228,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0.336985893439485,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,1.0843174571537,2.50668955317945,1.01392563272577,0,3.40644409211845,0,0,0.087834785693126,0.130979075497713,0,0,0.649094787309367,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0.286836620748814,0.709336764396714,0,1.06748995729705,0,0.311211035399766,0.404132016209064,0,0.605429710579726,0,0,0.312160076830321,0.570471821544449,1.19558944441441,0.117434498643765,0.161872944368132,0.421352420106746,1.42907919878425,1.96534907698829,1.23990937410919,16.6320400019487,7.17074094907815,0.910161361938026,2.15585442544872,0.168336113954066,0.500474079487857,1.10825646193673,2.63386572528503,0.612975591598039,4.35690370829131,0.113432183160021,0.179389635688862,0.427114777637135,0.847727604638247,0.300091096084402,0.824420233907511,0.772921620136887,0.558350568994769,0,0.194874010322397,0,0.644349290496095,1.77810662500693,0,0.403008392910561,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,1.87467667973554,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0.2933531432838,0.387815147273333,0,0.845302752556,0.26593811658487,0,0.771622122786426,0,0.799266537048298,1.00084595560703,3.25572963234866,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0,0,0,0.579125226670317,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,1.00034104211935,1.89885516589815,1.03985430765404,1.60586089917446,0.788512075169673,0.937131319941706,3.31040709700491,4.5481500811197,8.27784570340039,0,0.553107505625109,1.65078867489357,1.17480694477644,0,0,0,0,0,0,0,1.24053903909388,0.153461973288062,0.561320188866147,2.56278298511402,1.53512174720011,1.44768529029247,1.48418066444991,0.308419387605311,0.355123450626254,0.574890092096664,1.03850885836724,0.232420756919918,0.604297247958111,0.601519410909855,0.276242966807689,1.26295892981067,2.73136752010076,2.62248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0.824328093181778,0.0915694648183434,0.165018999841176,0,0,0,2.51343867559517,0,0.307007349452259,0.413509717453592,0.214840489736547,0.725083469571143,0.170453254832202,0.534192213880424,0.661139661443912,0,0,0,1.85938219718914,1.25924938732256,0.6970372701606,0,1.59691809095107,1.73986598415015,0.55597265731176,0.286249773483982,0.744316738719335,0.949138274156178,0.953150969619124,0,0.855877976067841,0.95460974377781,0,0.719489830333259,0.823611089208164,0,0.202182481573316,0,0,0,0.974853958525138,4.22600587027022,1.09199929126389,1.69686518344455,0,0.551365343546124,0,2.63070531152258,1.15755106853338,1.31178950409327,0.405820753925408,0.30982349809975,0.563391205064483,0.286822704408103,0.294747123039363,0.35667105148125,1.41904425628239,2.53329162357197,2.30506425071931,0,0.699869440489966,0.192444225451024,0,0,1.03558180854457,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,1.1253553312841,0.667852230137435,0,0,1.39473591775749,1.65770349318689,0,0,0,0.933118762985422,0,0.179021174675609,0,0.986434056369336,0,2.22273980289274,0.969332746095218,1.66982576691332,0,0,0,0.724999575434793,0.1137934482855,0.508507300585533,0,0,0,0,3.54296554325536,0.60298219312704,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,1.61595542857974,0.227884111694002,0,0,0,0,0.732780747214898,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,1.14994833854341,1.22206028986725,0,0.123563938946503,0,0.876214728748802,2.40773294189637,6.09087558885882,0,0,0,0.789168805698781,0,0,0.442306057399416,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,1.92199335066233,0,0,0,0,1.93978032976839,0,0.45196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| |||
|short_description=p16@LPAR1 | |||
}} |
Revision as of 02:44, 23 January 2014
Short description: | p16@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_16_at_LPAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_U78192, Y09479_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | Q92633 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 9.23e-09 | 5 |
fat cell | 2.26e-08 | 15 |
stromal cell | 5.20e-07 | 28 |
adipocyte of omentum tissue | 9.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.52e-10 | 6 |
peritoneum | 1.52e-10 | 6 |
abdominal cavity | 1.52e-10 | 6 |
visceral peritoneum | 1.52e-10 | 6 |
adult organism | 1.99e-09 | 114 |
articulation | 3.92e-09 | 8 |
skeletal joint | 3.92e-09 | 8 |
articular system | 3.92e-09 | 8 |
subdivision of skeletal system | 2.25e-08 | 16 |
cavity lining | 2.35e-08 | 12 |
serous membrane | 2.35e-08 | 12 |
intervertebral cartilage | 9.99e-08 | 5 |
symphysis | 9.99e-08 | 5 |
nonsynovial joint | 9.99e-08 | 5 |
fibrous joint | 9.99e-08 | 5 |
cartilaginous joint | 9.99e-08 | 5 |
developing mesenchymal condensation | 9.99e-08 | 5 |
pre-cartilage condensation | 9.99e-08 | 5 |
cartilaginous condensation | 9.99e-08 | 5 |
cartilage element | 9.99e-08 | 5 |
post-cranial axial skeletal system | 9.99e-08 | 5 |
vertebral column | 9.99e-08 | 5 |
intervertebral disk | 9.99e-08 | 5 |
intervertebral joint | 9.99e-08 | 5 |
neural tube | 1.85e-07 | 56 |
neural rod | 1.85e-07 | 56 |
future spinal cord | 1.85e-07 | 56 |
neural keel | 1.85e-07 | 56 |
structure with developmental contribution from neural crest | 7.28e-07 | 132 |