FFCP PHASE1:Hg19::chr9:72658462..72658467,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23673 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z304 | |||
|association_with_transcript=-29bp_to_ENST00000377182,NM_153267,uc004ahm.2,uc004ahn.2_5end | |||
|description=CAGE_peak_11_at_MAMDC2_5end | |||
|id=chr9:72658462..72658467,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.94e-10!3;CL:0005012!1.94e-10!3;CL:0000067!1.94e-10!3;CL:0002304!1.94e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000222;1.81e-40;1!CL:0002581;1.81e-40;1!CL:0000650;5.15e-21;2!CL:1000500;5.15e-21;2!CL:1000618;5.15e-21;2!CL:1001318;5.15e-21;2!CL:0002173;5.15e-21;2!CL:0002605;1.22e-14;3!CL:0000669;3.26e-11;4!CL:0000128;5.08e-07;7!CL:0000126;5.08e-07;7!CL:0000127;5.08e-07;7!CL:1000746;5.86e-07;7!CL:1000612;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,9.91e-41,1;CL:0000650,6.96e-21,2;CL:1000500,6.96e-21,2;CL:1000618,6.96e-21,2;CL:1001318,6.96e-21,2;CL:0002173,6.96e-21,2;CL:0002605,1.22e-14,3;CL:0000669,3.79e-11,4;CL:0000128,5.08e-07,7;CL:0000126,5.08e-07,7;CL:0000127,5.08e-07,7;CL:0002453,5.08e-07,7;CL:1000746,6.39e-07,7;CL:1000612,6.39e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.81e-40;1!DOID:3350;5.15e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.21e-40,1;DOID:3350,5.70e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0000488!9.68e-14!4;UBERON:0007625!1.05e-10!11;UBERON:0001778!1.94e-10!3;UBERON:0001775!1.94e-10!3;UBERON:0002203!3.51e-09!6;UBERON:0001768!3.51e-09!6;UBERON:0005406!1.19e-08!2;UBERON:0001801!2.91e-08!14;UBERON:0000019!5.96e-08!19;UBERON:0000047!5.96e-08!19;UBERON:0004088!5.96e-08!19;UBERON:0003072!5.96e-08!19;UBERON:0003071!5.96e-08!19;UBERON:0004128!5.96e-08!19;UBERON:0000970!1.67e-07!20;UBERON:0002104!4.25e-07!21;UBERON:0001456!4.25e-07!21;UBERON:0000945!4.36e-07!8;UBERON:0010039!4.36e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;5.15e-21;2!UBERON:0003838;5.15e-21;2!UBERON:0003586;5.15e-21;2!UBERON:0005169;5.15e-21;2!UBERON:0002321;5.15e-21;2!UBERON:0005406;5.15e-21;2!UBERON:0005215;5.15e-21;2!UBERON:0002303;5.15e-21;2!UBERON:0002319;5.15e-21;2!UBERON:0003891;3.26e-11;4!UBERON:0000074;5.86e-07;7!UBERON:0001229;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,3.81e-21,2;UBERON:0003567,6.96e-21,2;UBERON:0003838,6.96e-21,2;UBERON:0003586,6.96e-21,2;UBERON:0005169,6.96e-21,2;UBERON:0002321,6.96e-21,2;UBERON:0005215,6.96e-21,2;UBERON:0002303,6.96e-21,2;UBERON:0002319,6.96e-21,2;UBERON:0003891,3.79e-11,4;UBERON:0010532,6.39e-07,7;UBERON:0000074,6.39e-07,7;UBERON:0001229,6.39e-07,7;UBERON:0001230,6.39e-07,7;UBERON:0003220,6.39e-07,7;UBERON:0005749,6.39e-07,7;UBERON:0004199,6.39e-07,7;UBERON:0004209,6.39e-07,7;UBERON:0004198,6.39e-07,7 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,2.38531015230125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.231860809950154,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0.39961921916426,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0.665756774185513,0,0 | |||
|short_description=p11@MAMDC2 | |||
}} |
Revision as of 01:37, 23 January 2014
Short description: | p11@MAMDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MAMDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000377182, NM_153267, uc004ahm.2, uc004ahn.2_5end |
EntrezGene: | MAMDC2 |
HGNC: | 23673 |
UniProt: | Q7Z304 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 9.91e-41 | 1 |
mesangial cell | 6.96e-21 | 2 |
kidney interstitial cell | 6.96e-21 | 2 |
juxtaglomerular complex cell | 6.96e-21 | 2 |
renal interstitial pericyte | 6.96e-21 | 2 |
extraglomerular mesangial cell | 6.96e-21 | 2 |
astrocyte of the cerebral cortex | 1.22e-14 | 3 |
pericyte cell | 3.79e-11 | 4 |
oligodendrocyte | 5.08e-07 | 7 |
macroglial cell | 5.08e-07 | 7 |
astrocyte | 5.08e-07 | 7 |
oligodendrocyte precursor cell | 5.08e-07 | 7 |
glomerular cell | 6.39e-07 | 7 |
kidney corpuscule cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 3.81e-21 | 2 |
abdomen connective tissue | 6.96e-21 | 2 |
abdominal segment connective tissue | 6.96e-21 | 2 |
trunk connective tissue | 6.96e-21 | 2 |
interstitial tissue | 6.96e-21 | 2 |
extraglomerular mesangium | 6.96e-21 | 2 |
kidney interstitium | 6.96e-21 | 2 |
juxtaglomerular apparatus | 6.96e-21 | 2 |
mesangium | 6.96e-21 | 2 |
stroma | 3.79e-11 | 4 |
primitive nephron | 6.39e-07 | 7 |
renal glomerulus | 6.39e-07 | 7 |
renal corpuscle | 6.39e-07 | 7 |
glomerular capsule | 6.39e-07 | 7 |
metanephric mesenchyme | 6.39e-07 | 7 |
glomerular tuft | 6.39e-07 | 7 |
S-shaped body | 6.39e-07 | 7 |
renal vesicle | 6.39e-07 | 7 |
comma-shaped body | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.21e-40 | 1 |
mesenchymal cell neoplasm | 5.70e-21 | 2 |