FFCP PHASE1:Hg19::chr8:129057497..129057520,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C370 | |||
|description=CAGE_peak_at_chr8:129057497..129057520,+ | |||
|id=chr8:129057497..129057520,+ | |||
|ontology_enrichment_celltype=CL:0000764!9.83e-14!2;CL:0000765!9.83e-14!2;CL:0000050!9.83e-14!2;CL:0000038!9.83e-14!2;CL:0000558!9.83e-14!2;CL:0000547!9.83e-14!2;CL:0000549!9.83e-14!2;CL:0000550!9.83e-14!2;CL:0000552!9.83e-14!2;CL:0000763!5.36e-13!112;CL:0000049!5.36e-13!112;CL:0002032!7.90e-09!165;CL:0000837!7.90e-09!165;CL:0000037!2.52e-08!172;CL:0000566!2.52e-08!172;CL:0000988!1.13e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.45e-25;2!CL:0000558;3.45e-25;2!CL:0000763;1.62e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.45e-25,2;CL:0000765,3.45e-25,2;CL:0000050,3.45e-25,2;CL:0000038,3.45e-25,2;CL:0000558,3.45e-25,2;CL:0000547,3.45e-25,2;CL:0000549,3.45e-25,2;CL:0000550,3.45e-25,2;CL:0000552,3.45e-25,2;CL:0000763,9.29e-21,108;CL:0000049,9.29e-21,108;CL:0002032,2.03e-13,161;CL:0000837,2.03e-13,161;CL:0000037,8.63e-13,168;CL:0000988,4.69e-12,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.42e-29!8;DOID:8692!4.53e-28!31;DOID:1240!7.85e-22!39;DOID:2531!3.84e-16!51;DOID:0060083!3.84e-16!51;DOID:8552!6.80e-08!1;DOID:9119!1.39e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.37e-56;8!DOID:8692;1.39e-46;31!DOID:1240;4.17e-29;39!DOID:2531;8.92e-19;51!DOID:0060083;8.92e-19;51!DOID:8552;7.09e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.88e-56,8;DOID:8692,1.57e-47,31;DOID:1240,1.51e-37,39;DOID:2531,1.98e-28,51;DOID:0060083,1.98e-28,51;DOID:8552,7.55e-14,1;DOID:0050686,1.17e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0001301!1.91e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,3.68737718685108,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.616339038092582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,1.0457418040996,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1588692160384,4.92349595790849,8.92503738970744,0.33307196799782,81.7724629509527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.63754764161,16.0172919038198,16.4692528826901,23.495022176618,19.9241419360394,10.9666239496461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77625595446959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:129057497..129057520,+ | |||
}} |
Revision as of 23:49, 22 January 2014
Short description: | p@chr8:129057497..129057520, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:129057497..129057520, + |
Coexpression cluster: | C370_acute_chronic_leukemia_CD34_testicular_Mast_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.45e-25 | 2 |
erythroblast | 3.45e-25 | 2 |
megakaryocyte-erythroid progenitor cell | 3.45e-25 | 2 |
erythroid progenitor cell | 3.45e-25 | 2 |
reticulocyte | 3.45e-25 | 2 |
proerythroblast | 3.45e-25 | 2 |
basophilic erythroblast | 3.45e-25 | 2 |
polychromatophilic erythroblast | 3.45e-25 | 2 |
orthochromatic erythroblast | 3.45e-25 | 2 |
myeloid cell | 9.29e-21 | 108 |
common myeloid progenitor | 9.29e-21 | 108 |
hematopoietic oligopotent progenitor cell | 2.03e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-13 | 161 |
hematopoietic stem cell | 8.63e-13 | 168 |
hematopoietic cell | 4.69e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.88e-56 | 8 |
myeloid leukemia | 1.57e-47 | 31 |
leukemia | 1.51e-37 | 39 |
hematologic cancer | 1.98e-28 | 51 |
immune system cancer | 1.98e-28 | 51 |
chronic myeloid leukemia | 7.55e-14 | 1 |
organ system cancer | 1.17e-09 | 137 |