FFCP PHASE1:Hg19::chr8:62200606..62200615,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157807 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23139 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=67bp_to_ENST00000521189_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_CLVS1_5end | |||
|id=chr8:62200606..62200615,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.25e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.20e-20;6!CL:0000404;1.20e-20;6!CL:0002319;3.61e-08;25!CL:0000047;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.32e-26,8;CL:0000540,1.86e-20,6;CL:0000031,1.86e-20,6;CL:0000404,1.86e-20,6;CL:0002319,4.32e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.20e-20;6!UBERON:0006215;1.36e-18;3!UBERON:0010122;6.14e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.12e-92!82;UBERON:0001049!6.26e-88!57;UBERON:0005068!6.26e-88!57;UBERON:0006241!6.26e-88!57;UBERON:0007135!6.26e-88!57;UBERON:0005743!9.85e-88!86;UBERON:0000073!2.59e-82!94;UBERON:0001016!2.59e-82!94;UBERON:0000955!8.43e-79!69;UBERON:0006238!8.43e-79!69;UBERON:0002616!7.51e-76!59;UBERON:0002780!1.32e-66!41;UBERON:0001890!1.32e-66!41;UBERON:0006240!1.32e-66!41;UBERON:0001893!3.12e-65!34;UBERON:0002020!3.30e-65!34;UBERON:0003528!3.30e-65!34;UBERON:0003080!6.97e-65!42;UBERON:0003075!8.30e-62!86;UBERON:0007284!8.30e-62!86;UBERON:0002791!8.95e-62!33;UBERON:0001869!2.33e-59!32;UBERON:0002346!1.14e-58!90;UBERON:0002619!2.62e-48!22;UBERON:0001950!1.55e-47!20;UBERON:0007023!3.48e-44!115;UBERON:0004121!6.85e-44!169;UBERON:0000033!5.44e-43!123;UBERON:0003056!9.90e-43!61;UBERON:0000924!1.18e-42!173;UBERON:0006601!1.18e-42!173;UBERON:0000956!3.35e-42!25;UBERON:0000203!3.35e-42!25;UBERON:0000153!1.42e-40!129;UBERON:0007811!1.42e-40!129;UBERON:0002420!7.24e-25!9;UBERON:0007245!7.24e-25!9;UBERON:0010009!7.24e-25!9;UBERON:0010011!7.24e-25!9;UBERON:0000454!7.24e-25!9;UBERON:0002308!7.98e-25!9;UBERON:0000125!7.98e-25!9;UBERON:0003076!6.83e-23!15;UBERON:0003057!6.83e-23!15;UBERON:0001871!5.20e-22!7;UBERON:0002298!2.11e-21!8;UBERON:0000025!5.99e-21!194;UBERON:0004733!6.34e-19!12;UBERON:0002028!6.34e-19!12;UBERON:0007277!6.34e-19!12;UBERON:0009663!2.51e-18!7;UBERON:0004732!2.31e-17!13;UBERON:0000200!1.05e-15!6;UBERON:0004111!4.47e-15!241;UBERON:0001872!2.35e-12!5;UBERON:0002021!2.98e-12!5;UBERON:0000477!3.61e-12!286;UBERON:0000349!4.11e-12!5;UBERON:0000988!5.27e-12!3;UBERON:0002771!7.37e-12!3;UBERON:0000064!2.34e-11!219;UBERON:0001896!2.39e-11!3;UBERON:0005290!2.39e-11!3;UBERON:0010096!2.39e-11!3;UBERON:0006331!2.48e-11!3;UBERON:0002680!1.14e-10!9;UBERON:0001895!1.14e-10!9;UBERON:0010092!1.14e-10!9;UBERON:0000483!1.57e-10!309;UBERON:0000119!2.42e-10!312;UBERON:0000475!1.07e-09!365;UBERON:0000369!3.13e-09!4;UBERON:0002435!3.13e-09!4;UBERON:0000204!3.13e-09!4;UBERON:0010082!3.13e-09!4;UBERON:0001876!2.25e-08!2;UBERON:0002148!2.51e-08!2;UBERON:0009662!2.51e-08!2;UBERON:0001875!4.70e-08!2;UBERON:0006514!4.70e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007190;1.40e-14;1!UBERON:0002680;7.68e-14;9!UBERON:0001895;7.68e-14;9!UBERON:0001872;1.50e-11;5!UBERON:0004733;1.57e-10;12!UBERON:0002028;1.57e-10;12!UBERON:0000073;5.75e-10;53!UBERON:0002616;5.75e-10;53!UBERON:0001016;7.00e-10;83!UBERON:0002037;8.85e-10;6!UBERON:0004732;9.18e-10;13!UBERON:0001869;3.85e-08;32!UBERON:0001873;6.14e-08;2!UBERON:0001893;4.03e-07;34!UBERON:0001017;7.06e-07;75!UBERON:0002780;9.95e-07;41!UBERON:0001890;9.95e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.99e-25,81;UBERON:0001016,8.29e-23,89;UBERON:0000073,6.78e-15,53;UBERON:0002616,6.78e-15,53;UBERON:0007190,1.41e-14,1;UBERON:0000955,2.26e-14,68;UBERON:0006238,2.26e-14,68;UBERON:0001049,4.50e-14,56;UBERON:0005068,4.50e-14,56;UBERON:0006241,4.50e-14,56;UBERON:0007135,4.50e-14,56;UBERON:0002680,5.90e-14,9;UBERON:0001895,5.90e-14,9;UBERON:0010092,5.90e-14,9;UBERON:0001872,1.76e-11,5;UBERON:0004121,2.26e-11,171;UBERON:0000924,2.26e-11,171;UBERON:0006601,2.26e-11,171;UBERON:0004733,1.29e-10,12;UBERON:0002028,1.29e-10,12;UBERON:0007277,1.29e-10,12;UBERON:0001869,6.10e-10,32;UBERON:0002037,6.50e-10,6;UBERON:0006215,6.50e-10,6;UBERON:0011216,6.83e-10,223;UBERON:0004732,7.67e-10,13;UBERON:0003075,2.00e-09,82;UBERON:0007284,2.00e-09,82;UBERON:0001893,2.27e-09,34;UBERON:0002346,5.90e-09,86;UBERON:0003076,1.33e-08,15;UBERON:0003057,1.33e-08,15;UBERON:0002780,8.50e-08,41;UBERON:0001890,8.50e-08,41;UBERON:0003080,8.50e-08,41;UBERON:0006240,8.50e-08,41;UBERON:0001873,8.60e-08,2;UBERON:0010122,8.60e-08,2;UBERON:0010371,2.79e-07,104 | |||
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|short_description=p4@CLVS1 | |||
}} |
Revision as of 22:14, 22 January 2014
Short description: | p4@CLVS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLVS1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 67bp_to_ENST00000521189_5end |
EntrezGene: | CLVS1 |
HGNC: | 23139 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.32e-26 | 8 |
neuron | 1.86e-20 | 6 |
neuroblast | 1.86e-20 | 6 |
electrically signaling cell | 1.86e-20 | 6 |
neural cell | 4.32e-08 | 25 |