FFCP PHASE1:Hg19::chr8:25337491..25337504,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:25337491..25337504,+ | |||
|id=chr8:25337491..25337504,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.36e-08!180;CL:0000057!1.03e-07!75;CL:0000499!2.03e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002602;1.95e-27;2!CL:0000342;8.74e-15;1!CL:0002565;8.74e-15;1!CL:0000153;7.20e-07;9!CL:0000447;7.20e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,2.09e-27,2;CL:0000342,8.17e-15,1;CL:0002565,8.17e-15,1;CL:0000153,8.10e-07,9;CL:0000447,8.10e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010226;6.65e-15;1!UBERON:0004140;1.84e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!9.07e-07!5;UBERON:0000982!9.07e-07!5;UBERON:0004770!9.07e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;1.95e-27;2!UBERON:0001995;1.95e-27;2!UBERON:0004715;1.95e-27;2!UBERON:0004905;7.51e-27;8!UBERON:0000982;7.51e-27;8!UBERON:0004770;7.51e-27;8!UBERON:0011135;2.37e-24;5!UBERON:0002216;2.37e-24;5!UBERON:0011134;2.37e-24;5!UBERON:0002209;2.37e-24;5!UBERON:0002213;2.37e-24;5!UBERON:0007844;2.37e-24;5!UBERON:0011138;2.37e-24;5!UBERON:0001130;2.37e-24;5!UBERON:0001066;2.37e-24;5!UBERON:0001468;2.37e-24;5!UBERON:0002418;1.19e-18;3!UBERON:0004755;1.19e-18;3!UBERON:0002084;6.65e-15;1!UBERON:0002082;6.65e-15;1!UBERON:0002506;8.74e-15;1!UBERON:0001769;8.74e-15;1!UBERON:0007195;1.84e-14;1!UBERON:0004765;9.27e-13;26!UBERON:0001434;1.35e-08;36!UBERON:0000075;5.00e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,2.09e-27,2;UBERON:0001995,2.09e-27,2;UBERON:0004715,2.09e-27,2;UBERON:0004905,9.50e-27,8;UBERON:0000982,9.50e-27,8;UBERON:0004770,9.50e-27,8;UBERON:0011135,3.13e-24,5;UBERON:0002216,3.13e-24,5;UBERON:0011134,3.13e-24,5;UBERON:0002209,3.13e-24,5;UBERON:0002213,3.13e-24,5;UBERON:0005856,3.13e-24,5;UBERON:0005866,3.13e-24,5;UBERON:0005863,3.13e-24,5;UBERON:0007844,3.13e-24,5;UBERON:0011138,3.13e-24,5;UBERON:0001130,3.13e-24,5;UBERON:0001066,3.13e-24,5;UBERON:0001468,3.13e-24,5;UBERON:0002418,1.24e-18,3;UBERON:0004755,1.24e-18,3;UBERON:0002084,7.13e-15,1;UBERON:0002082,7.13e-15,1;UBERON:0010226,7.13e-15,1;UBERON:0002506,8.17e-15,1;UBERON:0001769,8.17e-15,1;UBERON:0007195,2.41e-14,1;UBERON:0000075,5.44e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,1.89515962028049,0,0,0,0,0,2.35156070624089,1.32558950291166,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,1.00267582127178,0.579386075843295,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0.448346041655403,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0.635795703478686,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0.168776332241266,0.0974370051611986,0.504867548488229,0.644349290496095,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,2.40194934417936,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0.821271560138091,1.55776328755086,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0,0.255679882248303,0.0890320356467374,0,0,0,0,0.929691098594572,1.25924938732256,0,0.616067160352178,0.532306030317022,0,0,0,0,0,0,0,0,0.95460974377781,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,4.85547561184627,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,1.33902874465124,1.34366944973453,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,3.31045985182716,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0.447764408660622,0.701139929541673,0.554805861502613,0.947015026375446,0.251567901752575,7.11848977277229,0.457680136793847,0.756154618816195,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0,0,0,0,3.8220135030964,0,0,0,0,0,0.207216164163037,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr8:25337491..25337504,+ | |||
}} |
Revision as of 21:18, 22 January 2014
Short description: | p@chr8:25337491..25337504, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:25337491..25337504, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 2.09e-27 | 2 |
pigment cell (sensu Vertebrata) | 8.17e-15 | 1 |
iris pigment epithelial cell | 8.17e-15 | 1 |
GAG secreting cell | 8.10e-07 | 9 |
carbohydrate secreting cell | 8.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 2.09e-27 | 2 |
fibrocartilage | 2.09e-27 | 2 |
annulus fibrosus disci intervertebralis | 2.09e-27 | 2 |
articulation | 9.50e-27 | 8 |
skeletal joint | 9.50e-27 | 8 |
articular system | 9.50e-27 | 8 |
intervertebral cartilage | 3.13e-24 | 5 |
symphysis | 3.13e-24 | 5 |
nonsynovial joint | 3.13e-24 | 5 |
fibrous joint | 3.13e-24 | 5 |
cartilaginous joint | 3.13e-24 | 5 |
developing mesenchymal condensation | 3.13e-24 | 5 |
pre-cartilage condensation | 3.13e-24 | 5 |
cartilaginous condensation | 3.13e-24 | 5 |
cartilage element | 3.13e-24 | 5 |
post-cranial axial skeletal system | 3.13e-24 | 5 |
vertebral column | 3.13e-24 | 5 |
intervertebral disk | 3.13e-24 | 5 |
intervertebral joint | 3.13e-24 | 5 |
cartilage tissue | 1.24e-18 | 3 |
skeletal tissue | 1.24e-18 | 3 |
heart left ventricle | 7.13e-15 | 1 |
cardiac ventricle | 7.13e-15 | 1 |
future cardiac ventricle | 7.13e-15 | 1 |
iris epithelium | 8.17e-15 | 1 |
iris | 8.17e-15 | 1 |
stroma of bone marrow | 2.41e-14 | 1 |
subdivision of skeletal system | 5.44e-08 | 16 |