FFCP PHASE1:Hg19::chr7:150147877..150147898,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=155038 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21792 | |||
|TSSclassifier=strong | |||
|UniProt=Q8ND71 | |||
|association_with_transcript=-63bp_to_NM_175571,uc003whj.2_5end | |||
|coexpression_cluster_id=C1092 | |||
|description=CAGE_peak_3_at_GIMAP8_5end | |||
|id=chr7:150147877..150147898,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.40e-24!35;CL:0002139!2.54e-21!24;CL:0000071!6.25e-17!18;CL:0002546!6.25e-17!18;CL:0002078!1.73e-16!44;CL:0002057!3.99e-15!42;CL:0000860!2.66e-13!45;CL:0002194!7.07e-12!63;CL:0000576!7.07e-12!63;CL:0000040!7.07e-12!63;CL:0000559!7.07e-12!63;CL:0002009!1.15e-11!65;CL:0000557!2.13e-11!71;CL:0000839!3.23e-11!70;CL:0000766!5.17e-11!76;CL:0002087!1.67e-10!119;CL:0000213!7.04e-10!57;CL:0000215!7.04e-10!57;CL:0002031!1.46e-09!124;CL:1000413!1.81e-09!9;CL:0000738!5.09e-09!140;CL:0000791!2.78e-08!18;CL:0000789!2.78e-08!18;CL:0002420!2.78e-08!18;CL:0002419!2.78e-08!18;CL:0000790!2.78e-08!18;CL:0002543!2.76e-07!6;CL:0002544!5.60e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.00e-28;36!CL:0002139;2.60e-27;24!CL:0000071;1.66e-21;18!CL:0002078;1.25e-15;45!CL:1000413;8.17e-12;9!CL:0000213;6.66e-10;58!CL:0000215;6.66e-10;58!CL:0000576;2.64e-09;48!CL:0002543;5.47e-09;6!CL:0000860;5.68e-09;33!CL:0002057;5.68e-09;33!CL:0000473;8.18e-09;39!CL:0000234;8.18e-09;39!CL:0002544;1.24e-08;6!CL:0002138;2.30e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.99e-33,36;CL:0002139,2.68e-27,24;CL:0002078,7.43e-24,45;CL:0000071,1.43e-21,18;CL:0002546,1.43e-21,18;CL:0000213,8.07e-16,58;CL:0000215,8.07e-16,58;CL:0000473,2.65e-13,48;CL:0000234,2.65e-13,48;CL:0000860,1.38e-12,42;CL:0002057,1.38e-12,42;CL:1000413,7.49e-12,9;CL:0002194,1.36e-11,59;CL:0000576,1.36e-11,59;CL:0000040,1.36e-11,59;CL:0000559,1.36e-11,59;CL:0002009,6.60e-11,61;CL:0000839,4.37e-10,66;CL:0000557,8.50e-10,67;CL:0000766,4.18e-09,72;CL:0002543,5.11e-09,6;CL:0002544,1.28e-08,6;CL:0002087,7.09e-08,115;CL:0005020,2.72e-07,6;CL:0002138,2.72e-07,6;CL:0005022,2.72e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.66e-21;18!CL:0002057;2.10e-09;42!CL:0005022;2.30e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.01e-45!115;UBERON:0001986!6.25e-17!18;UBERON:0004638!6.25e-17!18;UBERON:0004852!6.25e-17!18;UBERON:0002193!2.43e-16!112;UBERON:0003081!3.50e-14!216;UBERON:0002390!6.42e-13!102;UBERON:0003061!6.42e-13!102;UBERON:0000487!1.97e-12!22;UBERON:0002405!2.22e-12!115;UBERON:0006914!4.63e-10!25;UBERON:0003915!1.81e-09!9;UBERON:0004700!1.81e-09!9;UBERON:0001917!1.81e-09!9;UBERON:0001049!8.25e-09!57;UBERON:0005068!8.25e-09!57;UBERON:0006241!8.25e-09!57;UBERON:0007135!8.25e-09!57;UBERON:0002371!1.31e-08!80;UBERON:0001009!1.09e-07!113;UBERON:0004111!1.11e-07!241;UBERON:0000025!1.79e-07!194;UBERON:0001474!3.80e-07!86;UBERON:0003080!7.16e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.66e-21;18!UBERON:0001986;1.66e-21;18!UBERON:0004852;1.66e-21;18!UBERON:0000487;2.26e-16;22!UBERON:0006914;1.24e-13;25!UBERON:0003915;8.17e-12;9!UBERON:0004700;8.17e-12;9!UBERON:0001917;8.17e-12;9!UBERON:0000490;2.93e-08;33!UBERON:0001638;1.59e-07;9!UBERON:0003920;1.59e-07;9!UBERON:0004582;1.59e-07;9!UBERON:0007023;4.06e-07;114!UBERON:0002465;7.27e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.52e-26,114;UBERON:0004638,1.43e-21,18;UBERON:0001986,1.43e-21,18;UBERON:0004852,1.43e-21,18;UBERON:0003081,3.85e-18,203;UBERON:0000487,2.01e-16,22;UBERON:0002193,1.20e-15,108;UBERON:0006914,1.13e-13,25;UBERON:0002405,8.93e-13,93;UBERON:0003915,7.49e-12,9;UBERON:0004700,7.49e-12,9;UBERON:0001917,7.49e-12,9;UBERON:0002390,1.60e-11,98;UBERON:0003061,1.60e-11,98;UBERON:0001009,1.69e-10,112;UBERON:0000055,4.52e-10,68;UBERON:0000926,1.11e-09,315;UBERON:0004120,1.11e-09,315;UBERON:0006603,1.11e-09,315;UBERON:0004535,4.99e-09,109;UBERON:0002049,1.35e-07,78;UBERON:0007798,1.35e-07,78;UBERON:0002371,1.38e-07,76;UBERON:0001638,1.52e-07,9;UBERON:0003920,1.52e-07,9;UBERON:0004582,1.52e-07,9;UBERON:0007500,1.69e-07,59;UBERON:0001981,1.69e-07,59;UBERON:0004537,1.69e-07,59;UBERON:0006965,1.69e-07,59;UBERON:0002465,6.78e-07,10;UBERON:0004872,9.93e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,1.23852898652861,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.868043482863407,3.35873211359887,2.26725566213286,5.92423805558629,4.36194716338694,2.64513160582167,3.15359279544161,1.16214518452842,0,0.309706370895104,1.7261543539329,1.5369642391746,2.12834006899727,1.03423704220986,2.5819387343353,0,1.50593871634084,0,0.898893937780338,1.22433556948361,0.320929027076094,1.27867425159808,8.2462825046679,4.9865914405408,6.81959600852311,0,0,0,2.00998932205395,1.0429658368404,1.52032191293582,1.81619850790011,0.368277635987565,0.949387162322653,5.91514801673437,7.01594189884644,2.30624510059213,4.04383072127382,5.55654503513573,3.2145117339416,6.55529310604872,10.1447505371536,2.92262646023414,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.590129310341499,1.17903228824749,1.23360899399706,0,2.28145586643513,2.8406868344084,3.89653456815823,0.779873198196215,0.589211814949674,1.32920336750173,1.35401931882508,1.15282187753108,0.520237390239513,3.28875809207352,2.76350017785848,1.44901542867526,3.11401782640327,5.61835738988397,6.27213142829861,2.03956816855619,3.06576394881537,1.37450978193052,2.27717722817553,3.82278497188916,2.60433381542567,0,2.86092726247768,3.96758494578697,2.49861453104692,5.44587679701239,3.28451198768419,0.201606743224732,0.802320587350522,0.579297615531196,0,0,0.511450247374121,0,0,0,0,0,0,0,0.087834785693126,3.20898734969396,0,0,0,0,0.398873881556595,0,0,0,7.7517338873015,6.02164216574287,7.63709103536707,7.34900324501212,8.38998872419812,6.05259692268148,3.9709043641994,2.58416759169329,2.49036383880697,4.01664735317604,1.20848795132744,3.80136052859256,5.6134273236079,8.45625084795498,6.48113558305408,18.9315423962249,18.4114085553459,17.3421679944316,9.19899824795299,4.74632829784064,11.5417098676157,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0.67355336034844,0.326923806226917,0,0,0,0,2.85235910772225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.097285457238,4.20725321410337,0,0,0,0,6.49868897349544,0,0,0,0,0,0,0,0,0,0,0,0,5.05282567163758,6.01881166349594,8.37118269832232,0,0,2.21595305478658,0.234004265139238,5.05345951781676,0,0,0,0,0,0,0,0,0.414656231081544,1.44119953416961,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02257091432126,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0.513372145118994,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.72571360654893,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5106722477986,6.80374821106063,7.1252252313706,12.3381802152231,0,0,0,0,0,0,0,0,0,0,3.60643540767028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,3.67160823029439,0,0,0,0,2.53723804616085,0,3.98753031021914,4.52640373369799,2.46817363851717,0.648473311192717,2.16012574895246,3.17250070517708,0,0,0,0,0,0.0711418433484141,0,0.59873811429845,0.383010740264733,1.05836791361941,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.49747439776985,0,0,0,0,0,0,0,0.422008249231538,0,0,0,3.38721580026819,3.59169090190492,0,0,0,0,0,0,0,2.17015492401254,0,0,0.969332746095218,0.649376687132959,0,0,0,12.3249927823915,0,0,0,0,0,0,0.885741385813839,1.20596438625408,0,0.331737779793674,0.295547618953547,0.87754158861589,0,0,4.15531395920504,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0.995261931078505,2.29989667708682,2.4441205797345,0,0,0,1.07841812769083,4.81546588379273,0.234264445725339,0,0,0,1.57833761139756,3.62972148145992,0,1.83241080922615,0,0,0,0,0,0,0,0,0,0,0,4.01871336956669,0,0,0,0,2.03676934625681,0,1.58186518546373,0,0,0.633107959558787,0,0,3.41524791582964,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.09524303113594,0,0,0,6.14421282798959,9.39557738447903,11.485968393229,2.99518500748487,4.29226048136571,5.13294352116307,4.36692571163721,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0.2249738915515,0,0.425246896606173,0,3.62506253576312,2.25554728980492,0,0,0,15.7232971802141,4.63464379255802,0,0,0,0,0,0,0,0,3.51725360827398,2.65013777824443,0.904980694530854,0.79339561045614,0,0,5.33937062838473,3.45849471219265,27.3397776529149,11.4118185016749,0,0,0,0.544017803369474,2.2562090462043,0.306345576763462,0.655745261419609,0,0,0.854183854313742,0.500763722825999,1.72022758707021,0.887432412294818,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.319267718114302,1.43581454968528,0.504143392443436,0.414943514785307,0.484426936895553,2.85538840518309,0,0,0,0,0,0,0,2.03067886542995,0,1.56302802246618,0,0,0,0.540300676947157,0,0.206686796501184,0.570742291745161,0,2.74128883428591,6.45074531906083,0,0,2.14280734351315,0.672567444437648,0.606965604236632,1.13831095675649,1.41923792260222,0,0,0.679697329768317,0.460409414939944,0,0,2.90424443546902,0.314231179832004,0,4.56579360254748,0,0,2.50167904618297,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,3.88457302312737,4.20917508110613,1.1598144313382,1.94284397223656,0,0,0,0,0,0,1.46630900405095,1.5299169235277,0,2.45148321753905,0,1.76677620403451,1.78227840196252,1.6906229103336,0,11.1840862396026,6.7680782372256,0,0,0,0,0.730336388246517,2.2936464170227,1.00337708206016,0,0.407948941145488,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,3.56159881625725,0.267964130156178,0,0.620597975171371,4.90438158372256,3.09483760902862,1.0980114672121,0.931120714437869,0,2.80047496423926,4.44657815708082,3.9189014621453,1.71116650542641,1.88585748440845,3.37094365345579,7.98384855710432,0,0,0,0,0,5.37862354404612,2.84827324821017,5.99181096766961,10.0636896795513,0 | |||
|short_description=p3@GIMAP8 | |||
}} |
Revision as of 20:02, 22 January 2014
Short description: | p3@GIMAP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GIMAP8_5end |
Coexpression cluster: | C1092_Hepatic_CD8_CD4_Endothelial_Renal_lymph_spleen |
Association with transcript: | -63bp_to_NM_175571, uc003whj.2_5end |
EntrezGene: | GIMAP8 |
HGNC: | 21792 |
UniProt: | Q8ND71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.99e-33 | 36 |
endothelial cell of vascular tree | 2.68e-27 | 24 |
meso-epithelial cell | 7.43e-24 | 45 |
blood vessel endothelial cell | 1.43e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.43e-21 | 18 |
lining cell | 8.07e-16 | 58 |
barrier cell | 8.07e-16 | 58 |
defensive cell | 2.65e-13 | 48 |
phagocyte | 2.65e-13 | 48 |
classical monocyte | 1.38e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-12 | 42 |
endothelial cell of artery | 7.49e-12 | 9 |
monopoietic cell | 1.36e-11 | 59 |
monocyte | 1.36e-11 | 59 |
monoblast | 1.36e-11 | 59 |
promonocyte | 1.36e-11 | 59 |
macrophage dendritic cell progenitor | 6.60e-11 | 61 |
myeloid lineage restricted progenitor cell | 4.37e-10 | 66 |
granulocyte monocyte progenitor cell | 8.50e-10 | 67 |
myeloid leukocyte | 4.18e-09 | 72 |
vein endothelial cell | 5.11e-09 | 6 |
aortic endothelial cell | 1.28e-08 | 6 |
nongranular leukocyte | 7.09e-08 | 115 |
lymphangioblast | 2.72e-07 | 6 |
endothelial cell of lymphatic vessel | 2.72e-07 | 6 |
vascular lymphangioblast | 2.72e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.52e-26 | 114 |
blood vessel endothelium | 1.43e-21 | 18 |
endothelium | 1.43e-21 | 18 |
cardiovascular system endothelium | 1.43e-21 | 18 |
lateral plate mesoderm | 3.85e-18 | 203 |
simple squamous epithelium | 2.01e-16 | 22 |
hemolymphoid system | 1.20e-15 | 108 |
squamous epithelium | 1.13e-13 | 25 |
immune system | 8.93e-13 | 93 |
endothelial tube | 7.49e-12 | 9 |
arterial system endothelium | 7.49e-12 | 9 |
endothelium of artery | 7.49e-12 | 9 |
hematopoietic system | 1.60e-11 | 98 |
blood island | 1.60e-11 | 98 |
circulatory system | 1.69e-10 | 112 |
vessel | 4.52e-10 | 68 |
mesoderm | 1.11e-09 | 315 |
mesoderm-derived structure | 1.11e-09 | 315 |
presumptive mesoderm | 1.11e-09 | 315 |
cardiovascular system | 4.99e-09 | 109 |
vasculature | 1.35e-07 | 78 |
vascular system | 1.35e-07 | 78 |
bone marrow | 1.38e-07 | 76 |
vein | 1.52e-07 | 9 |
venous blood vessel | 1.52e-07 | 9 |
venous system | 1.52e-07 | 9 |
epithelial tube open at both ends | 1.69e-07 | 59 |
blood vessel | 1.69e-07 | 59 |
blood vasculature | 1.69e-07 | 59 |
vascular cord | 1.69e-07 | 59 |
lymphoid system | 6.78e-07 | 10 |
splanchnic layer of lateral plate mesoderm | 9.93e-07 | 83 |