FFCP PHASE1:Hg19::chr7:116593361..116593409,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11351 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NRC1,E9PF01 | |||
|association_with_transcript=0bp_to_ENST00000265437,ENST00000393451,ENST00000438863,NM_018412,NM_021908,uc003vin.2,uc003vio.2,uc011knl.1_5end | |||
|description=CAGE_peak_2_at_ST7_5end | |||
|id=chr7:116593361..116593409,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.56e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.40e-07!106;DOID:0050687!1.96e-07!143;DOID:162!6.40e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.52e-07,106;DOID:0050687,2.24e-07,143;DOID:162,5.75e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-11!115;UBERON:0004921!1.55e-07!129;UBERON:0004185!1.55e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.45e-11,114;UBERON:0004921,2.82e-07,118 | |||
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| |||
|short_description=p2@ST7 | |||
}} |
Revision as of 18:58, 22 January 2014
Short description: | p2@ST7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ST7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265437, ENST00000393451, ENST00000438863, NM_018412, NM_021908, uc003vin.2, uc003vio.2, uc011knl.1_5end |
EntrezGene: | ST7 |
HGNC: | 11351 |
UniProt: | Q9NRC1E9PF01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.45e-11 | 114 |
subdivision of digestive tract | 2.82e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.52e-07 | 106 |
cell type cancer | 2.24e-07 | 143 |
cancer | 5.75e-07 | 235 |