FFCP PHASE1:Hg19::chr7:45952960..45952978,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-284bp_to_S56205_5end | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_16_at_IGFBP3_5end | |||
|id=chr7:45952960..45952978,- | |||
|ontology_enrichment_celltype=CL:0000057!3.68e-11!75;CL:0000055!1.24e-10!180;CL:0002620!1.26e-10!23;CL:0000153!8.93e-08!9;CL:0000447!8.93e-08!9;CL:0000667!9.04e-07!6;CL:0000058!9.04e-07!6;CL:0000138!9.04e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.45e-19;23!CL:0000138;9.60e-18;6!CL:0000153;3.11e-16;9!CL:0000447;3.11e-16;9!CL:0000327;1.57e-12;15!CL:0000499;2.61e-12;28!CL:0000135;8.23e-12;3!CL:0000388;8.23e-12;3!CL:0002617;1.96e-08;2!CL:0002589;1.96e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.57e-19,23;CL:0000058,1.03e-17,6;CL:0000138,1.03e-17,6;CL:0000153,2.63e-16,9;CL:0000447,2.63e-16,9;CL:0000057,1.87e-15,76;CL:0000327,1.42e-12,15;CL:0000499,2.14e-12,28;CL:0000135,5.74e-12,3;CL:0000388,5.74e-12,3;CL:0002589,1.34e-08,2;CL:0002617,2.29e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.09e-07!5;DOID:450!1.09e-07!5;DOID:66!1.09e-07!5;DOID:423!1.09e-07!5;DOID:0080000!1.09e-07!5;DOID:11722!1.09e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.36e-13;5!DOID:450;3.36e-13;5!DOID:66;3.36e-13;5!DOID:423;3.36e-13;5!DOID:0080000;3.36e-13;5!DOID:11722;3.36e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.54e-13,5;DOID:450,3.54e-13,5;DOID:66,3.54e-13,5;DOID:423,3.54e-13,5;DOID:0080000,3.54e-13,5;DOID:11722,3.54e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!9.61e-07!45;UBERON:0002416!9.61e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.23e-12;3!UBERON:0000043;8.23e-12;3!UBERON:0007845;8.23e-12;3!UBERON:0002097;3.29e-10;41!UBERON:0001529;1.96e-08;2!UBERON:0007204;1.96e-08;2!UBERON:0002199;6.13e-07;46!UBERON:0002416;6.13e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.74e-12,3;UBERON:0000043,5.74e-12,3;UBERON:0007845,5.74e-12,3;UBERON:0002097,1.26e-11,41;UBERON:0002199,4.42e-10,46;UBERON:0002416,4.42e-10,46;UBERON:0001529,1.34e-08,2;UBERON:0007204,1.34e-08,2 | |||
|phase1_expression=1.63510541343501,1.07050261945492,1.12763523276777,0,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,29.6380104955344,27.072247174338,18.2506613890638,2.3858578411533,15.5723158496843,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,1.14734648299525,0,1.12135520028461,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,2.33206526395521,0.85422955527427,2.54318281391474,3.30100205692843,2.88547081867629,1.54584324027377,4.46680455195816,0.675105328965065,1.55899208257918,2.77677151668526,3.22174645248048,0.161646056818812,5.68015348026583,3.32481924151213,0.847802961552438,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.718874566474748,3.44585807502342,0,1.15825045334063,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.713715955188647,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,1.48864684691266,0.460385919864187,1.40330047216537,0.768834895534206,1.02341449813341,0.482561763430822,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0.459257792658427,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,4.7221852024596,0,0,0,0,1.48259375283136,1.71749864090389,0,0,0,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0,0,0,0.421258456238981,0.975267478179181,0.487426979262569,0,0,0,0,0,7.29782872765342,5.26141062304515,0,0,0,0,0,0,0,0.35667105148125,0,0.844430541190656,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.86493381685228,0.890894042497916,1.53580351049616,0,0,0,0,0,0.19924798825107,0,0,0,0,6.84287092855976,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,1.5950057986596,0.366390373607449,3.19820865611181,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.347119476670262,0.0979923974143777,0,0,0.51595809741485,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0,2.99714414373195,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896436696664224,0,0,0.662091970365432,0,1.08599920350743,2.5926644736038,0.653174720218818,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0.467426619694449,0.554805861502613,0.378806010550178,0.754703705257725,0.889811221596536,0.228840068396924,0.604923695052956,0.466311601748341,0.295710299979268,0,0,0.155262956876259,0,0,0.521745061811734,0,0.761610424337591,0.406870733204662,0.181848659202559,0,0,0.796191777397232,0,0.343395705182793,0.336749488765919,1.26184898228651,0,0,0,0.226705925512272,0,0,1.25362188757041,2.16161013012681,0,0.353378291891762,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.924205329202706,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0.511049710558381,0,0,0,0,0.620916591138472,0,0,0,0,0,0.111231401892069,0,0,0,0,1.94334832096759,13.3770472608374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0.437119121007915,0,0,0,0,0,0,3.56846940844415,0,0.128915775947154,0,1.42843150884526,0,0,0,0,0,0,0,0,0.5290268405154,1.48798007266701,1.84870251452567,1.29787968637137,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p16@IGFBP3 | |||
}} |
Revision as of 16:55, 22 January 2014
Short description: | p16@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | -284bp_to_S56205_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.57e-19 | 23 |
chondroblast | 1.03e-17 | 6 |
chondrocyte | 1.03e-17 | 6 |
GAG secreting cell | 2.63e-16 | 9 |
carbohydrate secreting cell | 2.63e-16 | 9 |
fibroblast | 1.87e-15 | 76 |
extracellular matrix secreting cell | 1.42e-12 | 15 |
stromal cell | 2.14e-12 | 28 |
fibrocyte | 5.74e-12 | 3 |
tendon cell | 5.74e-12 | 3 |
smooth muscle cell of the brachiocephalic vasculature | 1.34e-08 | 2 |
adipocyte of breast | 2.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.74e-12 | 3 |
tendon | 5.74e-12 | 3 |
regular connective tissue | 5.74e-12 | 3 |
skin of body | 1.26e-11 | 41 |
integument | 4.42e-10 | 46 |
integumental system | 4.42e-10 | 46 |
brachiocephalic artery | 1.34e-08 | 2 |
brachiocephalic vasculature | 1.34e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.54e-13 | 5 |
myotonic disease | 3.54e-13 | 5 |
muscle tissue disease | 3.54e-13 | 5 |
myopathy | 3.54e-13 | 5 |
muscular disease | 3.54e-13 | 5 |
myotonic dystrophy | 3.54e-13 | 5 |