FFCP PHASE1:Hg19::chr7:45928116..45928125,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3484 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5469 | |||
|TSSclassifier=strong | |||
|UniProt=C9J6H2 | |||
|association_with_transcript=20bp_to_ENST00000468955_5end | |||
|coexpression_cluster_id=C1998 | |||
|description=CAGE_peak_5_at_IGFBP1_5end | |||
|id=chr7:45928116..45928125,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.18e-12!12;CL:0000417!1.18e-12!12;CL:0000668!1.18e-12!12;CL:0000414!1.18e-12!12;CL:0000412!1.18e-12!12;CL:0000182!1.18e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.24e-09;3!CL:0000182;3.70e-09;12!CL:0000083;1.54e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.30e-09,3;CL:0000182,3.55e-09,12;CL:0000083,1.49e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.78e-26;1!UBERON:0004161;4.62e-10;11!UBERON:0009497;1.17e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;8.82e-14;2!DOID:1793;1.54e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,8.28e-14,2;DOID:1793,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002107!6.64e-14!19;UBERON:0006925!6.64e-14!19;UBERON:0008836!6.64e-14!19;UBERON:0005057!2.96e-12!26;UBERON:0008835!7.87e-12!22;UBERON:0003894!7.87e-12!22;UBERON:0009854!2.93e-11!23;UBERON:0007499!2.96e-10!25;UBERON:0009497!2.96e-10!25;UBERON:0000015!2.96e-10!25;UBERON:0002423!2.96e-10!25;UBERON:0006235!2.96e-10!25;UBERON:0004161!2.96e-10!25;UBERON:0009856!8.24e-10!26;UBERON:0002368!8.75e-09!35;UBERON:0000949!4.07e-08!45;UBERON:0002365!5.06e-08!31;UBERON:0002330!5.06e-08!31;UBERON:0002417!7.01e-08!61;UBERON:0000916!7.01e-08!61;UBERON:0005172!1.68e-07!55;UBERON:0005173!1.68e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.18e-21;19!UBERON:0006925;3.18e-21;19!UBERON:0002423;2.91e-16;25!UBERON:0002365;4.45e-13;31!UBERON:0002330;4.45e-13;31!UBERON:0000949;3.03e-12;43!UBERON:0002368;4.94e-11;33!UBERON:0003124;1.24e-09;3!UBERON:0000920;1.24e-09;3!UBERON:0001987;1.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.02e-21,19;UBERON:0006925,3.02e-21,19;UBERON:0008836,3.02e-21,19;UBERON:0008835,1.99e-18,22;UBERON:0003894,1.99e-18,22;UBERON:0009854,1.19e-17,23;UBERON:0007499,2.79e-16,25;UBERON:0009497,2.79e-16,25;UBERON:0000015,2.79e-16,25;UBERON:0002423,2.79e-16,25;UBERON:0006235,2.79e-16,25;UBERON:0004161,2.79e-16,25;UBERON:0009856,1.13e-15,26;UBERON:0003124,3.06e-15,7;UBERON:0000949,5.03e-14,45;UBERON:0002365,3.17e-13,31;UBERON:0002330,3.17e-13,31;UBERON:0002368,9.10e-12,35;UBERON:0000920,1.30e-09,3;UBERON:0005631,4.19e-08,14;UBERON:0000158,4.19e-08,14;UBERON:0003929,9.09e-08,54;UBERON:0005172,9.09e-08,54;UBERON:0005173,9.09e-08,54;UBERON:0001987,1.40e-07,4;UBERON:0004340,1.40e-07,4;UBERON:0002530,3.87e-07,59;UBERON:0002417,5.02e-07,60;UBERON:0000916,5.02e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19001159731919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34483573884932,7.95041333473328,0,0.13223260174269,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,4.70122561861986,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,3.59300808426348,0,0,0,0,0,0 | |||
|short_description=p5@IGFBP1 | |||
}} |
Revision as of 16:54, 22 January 2014
Short description: | p5@IGFBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IGFBP1_5end |
Coexpression cluster: | C1998_liver_chorionic_placenta_tubular_Hepatocyte_lung_hepatocellular |
Association with transcript: | 20bp_to_ENST00000468955_5end |
EntrezGene: | IGFBP1 |
HGNC: | 5469 |
UniProt: | C9J6H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.30e-09 | 3 |
hepatocyte | 3.55e-09 | 12 |
epithelial cell of pancreas | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 3.02e-21 | 19 |
digestive gland | 3.02e-21 | 19 |
liver bud | 3.02e-21 | 19 |
hepatic diverticulum | 1.99e-18 | 22 |
liver primordium | 1.99e-18 | 22 |
digestive tract diverticulum | 1.19e-17 | 23 |
epithelial sac | 2.79e-16 | 25 |
epithelium of foregut-midgut junction | 2.79e-16 | 25 |
anatomical boundary | 2.79e-16 | 25 |
hepatobiliary system | 2.79e-16 | 25 |
foregut-midgut junction | 2.79e-16 | 25 |
septum transversum | 2.79e-16 | 25 |
sac | 1.13e-15 | 26 |
chorion | 3.06e-15 | 7 |
endocrine system | 5.03e-14 | 45 |
exocrine gland | 3.17e-13 | 31 |
exocrine system | 3.17e-13 | 31 |
endocrine gland | 9.10e-12 | 35 |
egg chorion | 1.30e-09 | 3 |
extraembryonic membrane | 4.19e-08 | 14 |
membranous layer | 4.19e-08 | 14 |
gut epithelium | 9.09e-08 | 54 |
abdomen element | 9.09e-08 | 54 |
abdominal segment element | 9.09e-08 | 54 |
placenta | 1.40e-07 | 4 |
allantois | 1.40e-07 | 4 |
gland | 3.87e-07 | 59 |
abdominal segment of trunk | 5.02e-07 | 60 |
abdomen | 5.02e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 8.28e-14 | 2 |
pancreatic cancer | 1.49e-07 | 4 |