FFCP PHASE1:Hg19::chr7:24797517..24797528,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1687 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2810 | |||
|TSSclassifier=strong | |||
|UniProt=C9JSR4 | |||
|association_with_transcript=30bp_to_ENST00000414428_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_DFNA5_5end | |||
|id=chr7:24797517..24797528,- | |||
|ontology_enrichment_celltype=CL:0002009!4.44e-14!65;CL:0000860!7.29e-14!45;CL:0002194!1.09e-13!63;CL:0000576!1.09e-13!63;CL:0000040!1.09e-13!63;CL:0000559!1.09e-13!63;CL:0002057!3.81e-12!42;CL:0000557!5.20e-12!71;CL:0000839!2.55e-11!70;CL:0000766!1.14e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.73e-31;33!CL:0002057;4.73e-31;33!CL:0000473;7.13e-22;39!CL:0000234;7.13e-22;39!CL:0000576;1.11e-13;48!CL:0000766;1.14e-11;69!CL:0002581;2.33e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.29e-30,42;CL:0002057,2.29e-30,42;CL:0000473,3.12e-26,48;CL:0000234,3.12e-26,48;CL:0002194,1.92e-20,59;CL:0000576,1.92e-20,59;CL:0000040,1.92e-20,59;CL:0000559,1.92e-20,59;CL:0002009,1.07e-19,61;CL:0000839,5.05e-18,66;CL:0000557,1.02e-17,67;CL:0000766,2.56e-16,72;CL:0000763,4.93e-10,108;CL:0000049,4.93e-10,108;CL:0002087,2.88e-09,115;CL:0002031,8.98e-09,120;CL:0002581,2.17e-08,1;CL:0000738,1.94e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-20;42!UBERON:0005425;4.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;4.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,3.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.71e-10!80;UBERON:0001474!6.88e-09!86;UBERON:0004765!2.25e-08!101;UBERON:0001434!2.25e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;4.40e-08;1!UBERON:0000941;4.40e-08;1!UBERON:0001785;4.40e-08;1!UBERON:0002464;4.40e-08;1!UBERON:0004904;4.40e-08;1!UBERON:0001021;4.40e-08;1!UBERON:0005208;4.40e-08;1!UBERON:0004145;4.40e-08;1!UBERON:0005946;4.40e-08;1!UBERON:0005965;4.40e-08;1!UBERON:0002078;4.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-15,76;UBERON:0001474,5.03e-14,82;UBERON:0004765,1.49e-12,90;UBERON:0002405,4.58e-12,93;UBERON:0002390,2.55e-11,98;UBERON:0003061,2.55e-11,98;UBERON:0001434,4.83e-11,100;UBERON:0002193,4.93e-10,108;UBERON:0002134,3.33e-08,1;UBERON:0005208,3.33e-08,1;UBERON:0005946,3.33e-08,1;UBERON:0005965,3.33e-08,1;UBERON:0002078,3.33e-08,1;UBERON:0000941,3.57e-08,1;UBERON:0001785,3.57e-08,1;UBERON:0002464,3.57e-08,1;UBERON:0004904,3.57e-08,1;UBERON:0001021,3.57e-08,1;UBERON:0003902,3.57e-08,1;UBERON:0005425,3.57e-08,1;UBERON:0003081,1.35e-07,203 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0.553995408531877,1.20326668482085,0.217010870715852,0.447830948479849,0.32389366601898,0,0,0,0,0.697287110717054,1.23350366406548,0.929119112685311,0.28769239232215,0.512321413058201,0.236482229888585,3.7922024881028,1.29096936716765,5.41705946377367,0,0.272906150057846,0,7.34601341690166,8.34415470397843,7.03270838378945,0,0,0,7.2552309657146,11.3477044938228,7.4738669879469,0,0.521482918420201,0,7.87019353423379,18.0456041633907,10.1267963981083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0.710019185033229,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0.16798212819886,0,0.358234090811393,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,1.09970290300263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0.280660094433074,0.896974044789907,0,0.804269605718038,2.96836132889982,0,0,0,0,0,0,0,0.276242966807689,0.114814448164607,0.364182336013434,0,0,0.385076685522074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.768760269460425,0.255225424989168,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.563391205064483,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0.278847488557207,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,2.38944859545918,0,0,0,0.195984794828755,0.435296032902013,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0,0,1.43574604915363,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0.342173675768659,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.686520205190771,0.604923695052956,0,0,0,0,0.155262956876259,0,0.53168342911599,0,0.150257608997218,0,0.406870733204662,0,0.537052785212442,0,0,0,0,0.336749488765919,0,0,1.07220795687463,0.521988583930423,0.453411851024545,0.694567422971502,0,0.179088841081487,0,0.438568099157414,0.706756583783524,1.15748422962549,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.737318726261158,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0,1.42769420259154,0.0981477185010256,0,0.366857197043358,0,0.381382095467167,0,0,0,1.0085253435176,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0.62041277132864,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0.178553938605658,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@DFNA5 | |||
}} |
Revision as of 16:05, 22 January 2014
Short description: | p6@DFNA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DFNA5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 30bp_to_ENST00000414428_5end |
EntrezGene: | DFNA5 |
HGNC: | 2810 |
UniProt: | C9JSR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.29e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.29e-30 | 42 |
defensive cell | 3.12e-26 | 48 |
phagocyte | 3.12e-26 | 48 |
monopoietic cell | 1.92e-20 | 59 |
monocyte | 1.92e-20 | 59 |
monoblast | 1.92e-20 | 59 |
promonocyte | 1.92e-20 | 59 |
macrophage dendritic cell progenitor | 1.07e-19 | 61 |
myeloid lineage restricted progenitor cell | 5.05e-18 | 66 |
granulocyte monocyte progenitor cell | 1.02e-17 | 67 |
myeloid leukocyte | 2.56e-16 | 72 |
myeloid cell | 4.93e-10 | 108 |
common myeloid progenitor | 4.93e-10 | 108 |
nongranular leukocyte | 2.88e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.98e-09 | 120 |
perirenal preadipocyte | 2.17e-08 | 1 |
leukocyte | 1.94e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.50e-15 | 76 |
bone element | 5.03e-14 | 82 |
skeletal element | 1.49e-12 | 90 |
immune system | 4.58e-12 | 93 |
hematopoietic system | 2.55e-11 | 98 |
blood island | 2.55e-11 | 98 |
skeletal system | 4.83e-11 | 100 |
hemolymphoid system | 4.93e-10 | 108 |
tricuspid valve | 3.33e-08 | 1 |
right atrium valve | 3.33e-08 | 1 |
outflow tract of atrium | 3.33e-08 | 1 |
outflow part of right atrium | 3.33e-08 | 1 |
right cardiac atrium | 3.33e-08 | 1 |
cranial nerve II | 3.57e-08 | 1 |
cranial nerve | 3.57e-08 | 1 |
nerve trunk | 3.57e-08 | 1 |
nerve connecting eye with brain | 3.57e-08 | 1 |
nerve | 3.57e-08 | 1 |
retinal neural layer | 3.57e-08 | 1 |
presumptive neural retina | 3.57e-08 | 1 |
lateral plate mesoderm | 1.35e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 3.10e-08 | 1 |