FFCP PHASE1:Hg19::chr7:23507613..23507647,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:23507613..23507647,+ | |||
|id=chr7:23507613..23507647,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.77e-11!248;CL:0000220!9.53e-11!246;CL:0000055!1.21e-10!180;CL:0000066!1.60e-08!254;CL:0000183!2.52e-08!59;CL:0000393!2.78e-08!60;CL:0000211!2.78e-08!60;CL:0000548!6.11e-08!679;CL:0000004!6.11e-08!679;CL:0000255!6.11e-08!679;CL:0000187!7.66e-08!54;CL:0000012!1.33e-07!682;CL:0000680!1.57e-07!57;CL:0000056!1.57e-07!57;CL:0000355!1.57e-07!57;CL:0000222!1.62e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.58e-14;3!CL:0002592;4.86e-14;3!CL:0000349;1.01e-10;19!CL:0002536;4.56e-10;2!CL:0002367;1.16e-09;2!CL:0000359;1.00e-07;32!CL:0000154;4.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.22e-14,3;CL:0002592,5.87e-14,3;CL:0000349,1.13e-10,19;CL:0002367,4.01e-10,2;CL:0002536,4.59e-10,2;CL:0000359,1.69e-07,32;CL:0000154,2.39e-07,6;CL:0002603,8.55e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.21e-10!347;UBERON:0003104!5.58e-10!238;UBERON:0009142!5.58e-10!238;UBERON:0000914!4.10e-09!83;UBERON:0002329!4.10e-09!83;UBERON:0003077!4.10e-09!83;UBERON:0003059!4.10e-09!83;UBERON:0007282!4.10e-09!83;UBERON:0009618!4.10e-09!83;UBERON:0007285!4.10e-09!83;UBERON:0005256!6.62e-09!143;UBERON:0004290!2.01e-08!70;UBERON:0000475!5.63e-08!365;UBERON:0004872!8.62e-08!84;UBERON:0003102!1.20e-07!95;UBERON:0004119!1.88e-07!169;UBERON:0000925!1.88e-07!169;UBERON:0006595!1.88e-07!169;UBERON:0000490!2.06e-07!138;UBERON:0000486!2.08e-07!82;UBERON:0001637!2.23e-07!42;UBERON:0003509!2.23e-07!42;UBERON:0004572!2.23e-07!42;UBERON:0003914!3.71e-07!118;UBERON:0001134!3.89e-07!61;UBERON:0002036!3.89e-07!61;UBERON:0003082!3.89e-07!61;UBERON:0004923!4.45e-07!57;UBERON:0003124!5.91e-07!7;UBERON:0000119!6.99e-07!312;UBERON:0002100!9.41e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;5.31e-19;4!UBERON:0003498;4.86e-14;3!UBERON:0005985;4.86e-14;3!UBERON:0001621;4.86e-14;3!UBERON:0000478;7.22e-11;24!UBERON:0005969;1.16e-09;2!UBERON:0003956;1.16e-09;2!UBERON:0005631;3.00e-07;10!UBERON:0000158;3.00e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,7.63e-23,7;UBERON:0005631,1.74e-19,14;UBERON:0000158,1.74e-19,14;UBERON:0001987,4.20e-19,4;UBERON:0004340,4.20e-19,4;UBERON:0003498,3.17e-14,5;UBERON:0005985,3.17e-14,5;UBERON:0001621,5.87e-14,3;UBERON:0000478,8.07e-11,24;UBERON:0005969,4.01e-10,2;UBERON:0003956,4.01e-10,2;UBERON:0004872,1.01e-08,83;UBERON:0007503,8.85e-07,78 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,2.52687949370732,0,0.982935746006035,2.79120467188971,2.18441372130172,1.31883489114227,0.74259811776028,0.662794751455832,0.672325146451775,0,1.46062018077475,0,0.246242116153576,1.22400414746552,1.56727360739044,0,0.410623275218653,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0,0,0,0.367663080345869,0.81014194788176,0.17859945656816,0.22452937262617,0.563057402416611,1.53316637465883,0,0.366403487860815,0,0,0,0,0.759783069987479,0.926864265692532,0.286836620748814,0.709336764396714,0,0,0.74000264525148,0.933633106199299,0,0.163461903113459,0.302714855289863,0,0.468642863667593,0.936480230490962,0,0.298897361103602,0.352303495931295,0.485618833104395,0.421352420106746,0.408308342509787,0.491337269247072,0.516628905878827,0,0,0,0,0.336672227908132,0.750711119231785,0.554128230968366,0,0,0.300476117813194,0.226864366320042,0.358779271377724,0,0.211931901159562,0,0.412210116953756,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0.184099797284599,0.484938170456436,0,0.10075209822764,0.508681776931463,0.193260853163297,0,0.573609190778008,0,0.265059536642971,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0.236613600079688,0.337169380156203,0,0.330881918197182,0,0.71181185733329,0.134831308160164,0.392442930250692,0,0,0,0,1.47008711385542,0,0,0,0,0.614942192715568,0.514703430895577,0.658501712451753,0,0.100528972411631,0.0925884451585296,0.651616610620649,0,0,0.231860809950154,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0.224262168690721,0,0.4400297149257,0,7.15312891703765,0,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,0,0,0,0,0.601892199455438,0,1.03473071292505,0,1.10621501125022,0.695068915744663,0.195801157462741,0,0,0,0,2.12189300012382,4.99306318531491,1.5119514666484,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.116210378459959,0.362578348774867,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0.902399225814824,0.462092022626489,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,0.812839312631559,1.00337954770971,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,1.33953315142039,0.0915694648183434,0,0.574265537996172,1.95018073810956,1.6068392984416,0.290012154876366,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.435050081742686,0.255679882248303,0.267096106940212,0.495854746082934,0.384380134730212,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0.616067160352178,0,0,0.18532421910392,0.715624433709956,0,0.632758849437452,0.571890581771475,0.255897791311334,0,0.636406495851874,1.56989728039846,0.179872457583315,0.54907405947211,0.117812402345686,1.01091240786658,1.58510321173008,2.10629228119491,0.48763373908959,1.21856744815642,0,0.409499734223957,0.424216295861138,1.13008116620243,0,0,0,0,1.31178950409327,0.202910376962704,1.239293992399,0,0,0.0982490410131212,0.35667105148125,0,0,0,1.51789269506286,1.74967360122491,0.0962221127255121,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0.284136146806413,0.71623345421307,0,0.307160702099232,0,0,0,0,0,0,0,0,0.409074730008619,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,2.07507513949254,0.807818799687949,0.977826347298073,1.27600463892768,0.274792780205587,1.06606955203727,0,0,0,0,0.392125068635479,0.167821586975843,0.189753732724185,0,0.210998064528027,0.326465616318295,0.282706142867882,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0.61214552326098,0,2.40517471063188,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0.774050650312681,0.65780385377567,0.328461828212837,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0.514784993585894,1.1524383839052,0.124252535565433,0,0.407712618220842,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,1.41085292222125,0,0,0.787831823072237,0.412079291905832,0.404421263125109,0,0,0,0.136203406111576,0.160753148465019,0.687697182986169,0.415440338029185,0,0,0,0,0,0,0,0.35857467866569,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17108683788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| |||
|short_description=p@chr7:23507613..23507647,+ | |||
}} |
Revision as of 16:03, 22 January 2014
Short description: | p@chr7:23507613..23507647, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:23507613..23507647, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.22e-14 | 3 |
smooth muscle cell of the coronary artery | 5.87e-14 | 3 |
extraembryonic cell | 1.13e-10 | 19 |
trabecular meshwork cell | 4.01e-10 | 2 |
amniotic epithelial cell | 4.59e-10 | 2 |
vascular associated smooth muscle cell | 1.69e-07 | 32 |
protein secreting cell | 2.39e-07 | 6 |
astrocyte of the cerebellum | 8.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 7.63e-23 | 7 |
extraembryonic membrane | 1.74e-19 | 14 |
membranous layer | 1.74e-19 | 14 |
placenta | 4.20e-19 | 4 |
allantois | 4.20e-19 | 4 |
heart blood vessel | 3.17e-14 | 5 |
coronary vessel | 3.17e-14 | 5 |
coronary artery | 5.87e-14 | 3 |
extraembryonic structure | 8.07e-11 | 24 |
reticulum trabeculare | 4.01e-10 | 2 |
aqueous drainage system | 4.01e-10 | 2 |
splanchnic layer of lateral plate mesoderm | 1.01e-08 | 83 |
epithelial vesicle | 8.85e-07 | 78 |