FFCP PHASE1:Hg19::chr6:114292284..114292359,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3066 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4853 | |||
|TSSclassifier=strong | |||
|UniProt=Q92769,E5RFI6,E5RFP9,E5RK19 | |||
|association_with_transcript=0bp_to_ENST00000368632,ENST00000398283,ENST00000520170,ENST00000520895,ENST00000521163,ENST00000521233,ENST00000524334,NM_001527,NR_033441,uc003pwd.1,uc003pwe.1_5end | |||
|description=CAGE_peak_1_at_HDAC2_5end | |||
|id=chr6:114292284..114292359,- | |||
|ontology_enrichment_celltype=CL:0000066!1.26e-09!254;CL:0002319!3.00e-08!25;CL:0000133!3.37e-08!59;CL:0002321!3.57e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.95e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.17e-09,253;CL:0002319,3.00e-08,25;CL:0000133,3.37e-08,59;CL:0002321,5.81e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.76e-44!235;DOID:14566!4.60e-43!239;DOID:0050687!1.38e-23!143;DOID:0050686!4.79e-21!137;DOID:305!6.64e-16!106;DOID:2531!6.23e-12!51;DOID:0060083!6.23e-12!51;DOID:1240!1.01e-11!39;DOID:8692!3.61e-10!31;DOID:3095!1.76e-09!22;DOID:2994!1.76e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.77e-10;31!DOID:1240;1.22e-09;39!DOID:3095;1.86e-09;22!DOID:2994;1.86e-09;22!DOID:2531;2.19e-07;51!DOID:0060083;2.19e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.76e-44,235;DOID:14566,4.60e-43,239;DOID:0050687,1.38e-23,143;DOID:0050686,4.79e-21,137;DOID:305,6.64e-16,106;DOID:2531,6.23e-12,51;DOID:0060083,6.23e-12,51;DOID:1240,1.01e-11,39;DOID:8692,3.61e-10,31;DOID:3095,1.76e-09,22;DOID:2994,1.76e-09,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.63e-07;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=60.1355435385542,57.3789404027835,64.2752082677628,46.03371724244,42.9082650650196,57.5743425906243,43.0609792886128,50.5375898741465,30.5587184993811,44.7235764432746,35.5878595665938,47.4017777522474,28.486833648673,58.5414849501021,52.0293879892828,64.5432140593704,69.3098707227573,75.2219393098994,73.189919818576,51.7108443922509,49.980169354842,27.2705607685936,126.802542299058,153.025607231485,134.205081726844,79.5463553836173,84.3994059545442,91.4619278864953,8.65401409067589,17.6561523124718,16.7201413181362,90.1032799989349,53.6146535425285,48.0680213216824,49.1916723684915,105.489570505667,42.8656641428877,15.5118714388926,23.0626114590663,23.8711957787437,46.5744186419043,44.3734322446002,45.3332999036168,33.8777896356386,39.2990981436362,35.659856994609,24.4050488750969,27.9594163854842,21.6794459626573,23.5907761704163,33.3008918487831,22.229329609527,20.3399951634605,40.0200503821972,27.0852973188684,24.0950194614534,24.0157412050904,21.348731022283,29.9962214523485,20.2185287057939,31.9668562899521,23.4194423132568,28.722766697515,30.2619572878213,21.1852744198866,27.2344907851747,31.7639346987743,29.8985911655524,37.0252872078343,17.8094852658196,35.7185706553688,14.7311054395026,23.1017542831846,23.4493367806255,31.0402277948964,22.2238164238878,28.3068150489168,34.2403315678634,25.2339171114416,15.9607136495099,36.0039185730353,22.1023626055207,19.3595868907455,27.3069305631066,26.6852776159066,31.5780364699215,24.0237592221607,27.5881171178152,37.0185128759523,14.3108063180305,35.8604170538952,22.3150131960957,19.8782078625119,23.7908391442247,20.1783082673353,76.6447686695474,29.7031752871888,29.0827964434382,24.6721798799411,39.1216399214187,23.4664031976185,26.5130771211451,58.4480185223734,35.3171148326,31.2282261923327,31.2362791362906,26.2679747852065,46.8814230195971,41.618991219161,50.8113125225359,46.4268029880225,48.3971153177538,35.8853482852186,34.7803076516627,34.4967228556423,45.3237370790265,11.4966148080576,24.7411760747494,23.7838510498333,26.1223639745759,23.4390043388311,24.7117531556577,30.2655989346323,27.2611481758911,24.9861453104692,23.6777252044017,16.4225599384209,29.4345845108109,34.2323450602889,24.475324256193,80.4562658836074,70.4235902688818,89.7595184141583,68.311999800683,41.6110465827788,61.7046170773109,79.5285947051099,51.0966613817768,141.329551660281,143.902378953204,143.961213751034,41.7823250837703,19.6719455677973,25.5841265521256,52.5766777720587,49.1045859183934,46.0034543395273,50.5600123527325,37.7516641114884,37.8886651356156,46.510403323809,75.7006443693389,49.2939512282784,77.4471880435893,62.9249154314859,76.2076976173987,61.4445201618223,74.1656098815974,94.2780596119782,134.892406944162,60.8272268834812,63.1025847746365,63.4561349625241,88.9744654437002,79.3939108924124,100.46219431959,101.711805799655,100.562052071607,96.5894816035064,65.4993305102009,87.0208283669434,7.9068250461638,15.511210565933,19.1881382942715,78.5215683678603,89.2745107235287,77.1945524141066,87.772005949137,74.1256918794566,71.206055218073,64.049397437823,68.0802433631361,79.6700250623402,87.1578048290882,91.8655895497638,36.4771400624285,73.1743424089599,34.6795719114019,70.8603374404828,45.0672739020115,66.0563168038961,103.342358806513,124.965913052198,103.231342926153,60.8379430339582,103.303660859197,59.4123241760651,77.2201857233335,84.3180228839879,20.0235499626366,17.965453545406,104.200054537567,120.989608716189,83.9504269917074,108.427472357567,64.6689249135931,81.8797421040953,87.6830775826963,96.3322343649189,70.6874956989458,70.9971868884532,94.8287863626711,58.7399416659102,108.209026819164,62.7213805837458,84.5569424528744,64.9904824425195,101.730811020378,76.0332162785393,41.5430366024347,99.7576954971686,68.612178893023,79.0152360166872,85.6145579513405,94.6429038450196,83.7469418535891,198.329246166722,198.794652482228,187.420829848533,175.912810361084,184.194221139209,198.182705978176,57.8863269620319,61.751130066517,56.635317754517,47.3655286592619,35.3720946018097,96.4200420324728,99.8021365262362,107.249908298149,100.808691077408,104.582133164355,115.076250268882,99.7751680385217,104.782262376935,88.1070989407234,46.5037936413528,29.4507724987236,27.9870327705352,24.9914809355421,35.4914097501126,41.2787431004603,50.8079319746008,132.88039292381,99.3746583428357,104.484796471802,85.9344734749538,30.3484733795573,90.7776620877027,100.828816777639,33.8840637522738,20.7986957055916,122.681640721482,135.058921795964,89.5828337019319,65.2536343880054,48.1504933079675,78.7652190251237,40.300424295923,42.0658219426488,43.8266270835567,48.204878618683,49.4941770421465,74.0497288495538,57.1139235876122,64.0823439535587,73.5275471390384,72.0772167514626,64.7916727789207,31.5304472253404,54.2378353521472,41.2582949926136,44.5330656058411,30.5506688891839,94.675360389624,48.5125300459013,31.6487107467127,46.1895604261304,104.26707760117,73.5840491717598,73.4573931860586,58.756688196969,53.1871283976602,146.309880212795,93.334178777115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| |||
|short_description=p1@HDAC2 | |||
}} |
Revision as of 13:30, 22 January 2014
Short description: | p1@HDAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HDAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368632, ENST00000398283, ENST00000520170, ENST00000520895, ENST00000521163, ENST00000521233, ENST00000524334, NM_001527, NR_033441, uc003pwd.1, uc003pwe.1_5end |
EntrezGene: | HDAC2 |
HGNC: | 4853 |
UniProt: | Q92769E5RFI6E5RFP9E5RK19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.17e-09 | 253 |
neural cell | 3.00e-08 | 25 |
neurectodermal cell | 3.37e-08 | 59 |
embryonic cell | 5.81e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.76e-44 | 235 |
disease of cellular proliferation | 4.60e-43 | 239 |
cell type cancer | 1.38e-23 | 143 |
organ system cancer | 4.79e-21 | 137 |
carcinoma | 6.64e-16 | 106 |
hematologic cancer | 6.23e-12 | 51 |
immune system cancer | 6.23e-12 | 51 |
leukemia | 1.01e-11 | 39 |
myeloid leukemia | 3.61e-10 | 31 |
germ cell and embryonal cancer | 1.76e-09 | 22 |
germ cell cancer | 1.76e-09 | 22 |