FFCP PHASE1:Hg19::chr6:99848922..99848992,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=25957 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21222 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TF01 | |||
|association_with_transcript=-67bp_to_AF161379_5end | |||
|coexpression_cluster_id=C905 | |||
|description=CAGE_peak_2_at_PNISR_5end | |||
|id=chr6:99848922..99848992,- | |||
|ontology_enrichment_celltype=CL:0002032!3.22e-08!165;CL:0000837!3.22e-08!165;CL:0000037!3.28e-08!172;CL:0000566!3.28e-08!172;CL:0000988!3.91e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.84e-07;33!CL:0002057;3.84e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,3.09e-08,161;CL:0000837,3.09e-08,161;CL:0000037,3.48e-08,168;CL:0000988,1.68e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.69e-11!235;DOID:14566!3.92e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.20e-10,235;DOID:14566,3.24e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.26e-12!57;UBERON:0005068!3.26e-12!57;UBERON:0006241!3.26e-12!57;UBERON:0007135!3.26e-12!57;UBERON:0002780!7.64e-11!41;UBERON:0001890!7.64e-11!41;UBERON:0006240!7.64e-11!41;UBERON:0003080!2.91e-10!42;UBERON:0002020!9.05e-10!34;UBERON:0003528!9.05e-10!34;UBERON:0001017!6.06e-09!82;UBERON:0007023!8.80e-09!115;UBERON:0002616!2.90e-08!59;UBERON:0002791!3.29e-08!33;UBERON:0000955!3.35e-08!69;UBERON:0006238!3.35e-08!69;UBERON:0000073!3.92e-08!94;UBERON:0001016!3.92e-08!94;UBERON:0001869!9.78e-08!32;UBERON:0001893!1.09e-07!34;UBERON:0005743!1.25e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.29e-08;34!UBERON:0002020;1.29e-08;34!UBERON:0002791;1.34e-08;32!UBERON:0002780;1.35e-08;41!UBERON:0001890;1.35e-08;41!UBERON:0001869;1.54e-07;32!UBERON:0000073;5.06e-07;53!UBERON:0002616;5.06e-07;53!UBERON:0002619;9.58e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.70e-13,56;UBERON:0005068,8.70e-13,56;UBERON:0006241,8.70e-13,56;UBERON:0007135,8.70e-13,56;UBERON:0000073,2.47e-11,53;UBERON:0002616,2.47e-11,53;UBERON:0002780,1.01e-10,41;UBERON:0001890,1.01e-10,41;UBERON:0003080,1.01e-10,41;UBERON:0006240,1.01e-10,41;UBERON:0001016,6.11e-10,89;UBERON:0003528,6.35e-10,34;UBERON:0002020,6.35e-10,34;UBERON:0001017,1.89e-09,81;UBERON:0002791,6.79e-09,32;UBERON:0000955,1.05e-08,68;UBERON:0006238,1.05e-08,68;UBERON:0007023,4.15e-08,114;UBERON:0002346,8.21e-08,86;UBERON:0001869,1.08e-07,32;UBERON:0001893,1.62e-07,34;UBERON:0003075,4.70e-07,82;UBERON:0007284,4.70e-07,82 | |||
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| |||
|short_description=p2@PNISR | |||
}} |
Revision as of 13:05, 22 January 2014
Short description: | p2@PNISR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_PNISR_5end |
Coexpression cluster: | C905_cerebellum_occipital_anaplastic_middle_parietal_Neutrophils_olfactory |
Association with transcript: | -67bp_to_AF161379_5end |
EntrezGene: | PNISR |
HGNC: | 21222 |
UniProt: | Q8TF01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 3.09e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.09e-08 | 161 |
hematopoietic stem cell | 3.48e-08 | 168 |
hematopoietic cell | 1.68e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
neural tube | 8.70e-13 | 56 |
neural rod | 8.70e-13 | 56 |
future spinal cord | 8.70e-13 | 56 |
neural keel | 8.70e-13 | 56 |
regional part of nervous system | 2.47e-11 | 53 |
regional part of brain | 2.47e-11 | 53 |
regional part of forebrain | 1.01e-10 | 41 |
forebrain | 1.01e-10 | 41 |
anterior neural tube | 1.01e-10 | 41 |
future forebrain | 1.01e-10 | 41 |
nervous system | 6.11e-10 | 89 |
brain grey matter | 6.35e-10 | 34 |
gray matter | 6.35e-10 | 34 |
central nervous system | 1.89e-09 | 81 |
regional part of telencephalon | 6.79e-09 | 32 |
brain | 1.05e-08 | 68 |
future brain | 1.05e-08 | 68 |
adult organism | 4.15e-08 | 114 |
neurectoderm | 8.21e-08 | 86 |
cerebral hemisphere | 1.08e-07 | 32 |
telencephalon | 1.62e-07 | 34 |
neural plate | 4.70e-07 | 82 |
presumptive neural plate | 4.70e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.20e-10 | 235 |
disease of cellular proliferation | 3.24e-09 | 239 |