FFCP PHASE1:Hg19::chr6:64281927..64281943,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7803 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9634 | |||
|TSSclassifier=strong | |||
|UniProt=Q93096 | |||
|association_with_transcript=7bp_to_NM_003463,uc003pel.2_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_17_at_PTP4A1_5end | |||
|id=chr6:64281927..64281943,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.80e-09!254;CL:0002150!5.84e-08!3;CL:0000861!5.84e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.53e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.31e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.24e-30;29!UBERON:0006595;4.63e-07;86 | |||
|ontology_enrichment_disease=DOID:305!3.36e-18!106;DOID:0050687!1.56e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.53e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.85e-14,106;DOID:0050687,1.42e-09,143;DOID:2152,5.31e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.17e-20!9;UBERON:0000077!5.51e-12!130;UBERON:0004119!1.42e-11!169;UBERON:0000925!1.42e-11!169;UBERON:0006595!1.42e-11!169;UBERON:0008947!5.72e-11!38;UBERON:0003258!5.72e-11!38;UBERON:0004921!2.19e-10!129;UBERON:0004185!2.19e-10!129;UBERON:0001557!4.31e-10!19;UBERON:0001041!7.85e-10!98;UBERON:0001007!8.76e-10!155;UBERON:0001555!8.76e-10!155;UBERON:0007026!8.76e-10!155;UBERON:0000065!8.93e-10!53;UBERON:0001004!2.63e-08!72;UBERON:0005911!3.83e-08!82;UBERON:0009497!2.90e-07!25;UBERON:0000015!2.90e-07!25;UBERON:0002423!2.90e-07!25;UBERON:0006235!2.90e-07!25;UBERON:0004161!2.90e-07!25;UBERON:0002294!4.78e-07!7;UBERON:0001173!4.78e-07!7;UBERON:0004912!4.78e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.99e-69;9!UBERON:0001557;2.99e-69;9!UBERON:0000065;3.42e-22;44!UBERON:0000072;7.80e-19;37!UBERON:0001004;1.44e-10;65!UBERON:0004911;5.53e-09;1!UBERON:0002171;5.53e-09;1!UBERON:0006518;5.53e-09;1!UBERON:0008949;5.53e-09;1!UBERON:0000101;5.53e-09;1!UBERON:0002167;5.53e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.11e-69,9;UBERON:0001557,3.79e-32,19;UBERON:0008947,3.10e-27,38;UBERON:0003258,3.10e-27,38;UBERON:0001041,1.12e-19,87;UBERON:0000065,1.51e-18,54;UBERON:0000072,5.46e-15,47;UBERON:0004921,1.36e-13,118;UBERON:0001004,5.78e-13,74;UBERON:0001048,3.12e-12,160;UBERON:0001007,1.56e-10,145;UBERON:0001555,1.56e-10,145;UBERON:0007026,1.56e-10,145;UBERON:0004119,2.83e-09,160;UBERON:0000925,2.83e-09,160;UBERON:0006595,2.83e-09,160;UBERON:0004911,5.31e-09,1;UBERON:0002171,5.75e-09,1;UBERON:0006518,5.75e-09,1;UBERON:0008949,5.75e-09,1;UBERON:0000101,5.75e-09,1;UBERON:0002167,5.75e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,1.94826728407911,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8505788016336,5.56329477257736,6.50729780685401,5.73528658208448,4.79334777003293,3.55905928666645,4.71909578560575,6.47530834913642,9.23393176671337,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0.368323955743585,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,1.08890984861323,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0.179736702294654,3.04335996948536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0893846351899,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,6.67618685894687,8.55145009908371,5.17327379435218,0,0,0,0,0,0,0.586654148204409,0.160317640503067,0,0,0,0,0,0.576219191952599,0,5.89235086541989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,1.32506888912221,0.129282956361551,0,0.342173675768659,0,0.106787412567695,1.10043013569766,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0355275381743,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.590969204419841,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,2.34896406775364,0,0,0,0.102662806856247,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0.717222053926764,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p17@PTP4A1 | |||
}} |
Revision as of 12:29, 22 January 2014
Short description: | p17@PTP4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PTP4A1_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 7bp_to_NM_003463, uc003pel.2_5end |
EntrezGene: | PTP4A1 |
HGNC: | 9634 |
UniProt: | Q93096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 5.31e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.11e-69 | 9 |
upper respiratory tract | 3.79e-32 | 19 |
respiratory primordium | 3.10e-27 | 38 |
endoderm of foregut | 3.10e-27 | 38 |
foregut | 1.12e-19 | 87 |
respiratory tract | 1.51e-18 | 54 |
segment of respiratory tract | 5.46e-15 | 47 |
subdivision of digestive tract | 1.36e-13 | 118 |
respiratory system | 5.78e-13 | 74 |
primordium | 3.12e-12 | 160 |
digestive system | 1.56e-10 | 145 |
digestive tract | 1.56e-10 | 145 |
primitive gut | 1.56e-10 | 145 |
endoderm-derived structure | 2.83e-09 | 160 |
endoderm | 2.83e-09 | 160 |
presumptive endoderm | 2.83e-09 | 160 |
epithelium of female gonad | 5.31e-09 | 1 |
lower lobe of right lung | 5.75e-09 | 1 |
right lung lobe | 5.75e-09 | 1 |
lower lobe of lung | 5.75e-09 | 1 |
lobe of lung | 5.75e-09 | 1 |
right lung | 5.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.85e-14 | 106 |
cell type cancer | 1.42e-09 | 143 |
ovary epithelial cancer | 5.31e-09 | 1 |