FFCP PHASE1:Hg19::chr6:33714771..33714806,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117283 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17269 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PC2,A8K1M0,Q5TAQ4 | |||
|association_with_transcript=-9bp_to_ENST00000451316,NM_001142883,NM_054111,uc003ofb.2,uc010jvf.2_5end | |||
|description=CAGE_peak_2_at_IP6K3_5end | |||
|id=chr6:33714771..33714806,- | |||
|ontology_enrichment_celltype=CL:0000147!3.40e-09!14;CL:0000148!1.08e-07!10;CL:0000541!1.08e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000149;7.39e-09;4!CL:0000669;1.42e-08;4!CL:0000056;2.44e-08;4!CL:0000147;3.71e-08;14!CL:0002577;1.86e-07;3!CL:0000349;2.86e-07;19!CL:0002586;4.23e-07;3!CL:0000515;5.01e-07;3!CL:0002567;9.03e-07;3!CL:0000680;9.40e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000149,7.78e-09,4;CL:0000515,2.10e-08,4;CL:0000669,2.40e-08,4;CL:0000147,4.11e-08,14;CL:0002577,1.80e-07,3;CL:0000349,2.84e-07,19;CL:0002586,4.67e-07,3;CL:1000449,8.29e-07,15;CL:0002567,9.65e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;2.44e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.61e-14!347;UBERON:0000475!2.16e-11!365;UBERON:0005172!2.34e-11!55;UBERON:0005173!2.34e-11!55;UBERON:0007023!2.48e-11!115;UBERON:0000119!5.52e-11!312;UBERON:0003075!8.19e-11!86;UBERON:0007284!8.19e-11!86;UBERON:0000483!9.45e-11!309;UBERON:0002346!1.21e-09!90;UBERON:0002417!4.89e-09!61;UBERON:0000916!4.89e-09!61;UBERON:0005256!9.12e-09!143;UBERON:0005743!3.08e-08!86;UBERON:0000033!1.01e-07!123;UBERON:0000153!1.01e-07!129;UBERON:0007811!1.01e-07!129;UBERON:0000073!1.16e-07!94;UBERON:0001016!1.16e-07!94;UBERON:0000064!1.22e-07!219;UBERON:0002616!2.58e-07!59;UBERON:0000955!2.81e-07!69;UBERON:0006238!2.81e-07!69;UBERON:0003056!3.58e-07!61;UBERON:0002107!5.17e-07!19;UBERON:0006925!5.17e-07!19;UBERON:0008836!5.17e-07!19;UBERON:0004121!5.40e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005172;7.04e-10;52!UBERON:0005173;7.04e-10;52!UBERON:0002107;3.51e-08;19!UBERON:0006925;3.51e-08;19!UBERON:0001134;5.09e-08;16!UBERON:0002036;5.09e-08;16!UBERON:0003891;6.29e-08;4!UBERON:0002113;2.97e-07;24!UBERON:0011143;2.97e-07;24!UBERON:0001781;4.23e-07;3!UBERON:0001782;4.23e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.09e-16,160;UBERON:0009142,5.09e-16,160;UBERON:0005172,1.62e-12,54;UBERON:0005173,1.62e-12,54;UBERON:0005256,5.17e-11,122;UBERON:0002417,1.23e-10,60;UBERON:0000916,1.23e-10,60;UBERON:0002100,1.04e-08,199;UBERON:0007503,1.82e-08,78;UBERON:0001781,1.98e-08,4;UBERON:0002107,3.37e-08,19;UBERON:0006925,3.37e-08,19;UBERON:0008836,3.37e-08,19;UBERON:0000966,6.13e-08,6;UBERON:0005388,6.13e-08,6;UBERON:0001802,6.13e-08,6;UBERON:0003891,6.24e-08,4;UBERON:0005177,6.33e-08,101;UBERON:0001782,4.67e-07,3;UBERON:0005424,4.67e-07,3;UBERON:0004211,8.29e-07,15;UBERON:0009773,8.29e-07,15;UBERON:0001231,8.29e-07,15;UBERON:0001285,8.29e-07,15;UBERON:0007684,8.29e-07,15;UBERON:0004208,8.29e-07,15;UBERON:0008835,8.76e-07,22;UBERON:0003894,8.76e-07,22 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,2.79120467188971,3.9319446983431,1.58260186937072,0.866364470720326,0,0,0,0,0,0.61560529038394,0.612002073732759,0,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0.302714855289863,0,0.70296429550139,0,0,0,1.17434498643765,1.29498355494505,0.98315564691574,0.61246251376468,1.10550885580591,0.413303124703062,0,0,2.73048408581408,5.74894513452991,1.17835279767846,0.875829639103749,0.277064115484183,0,0,0,0,0.179389635688862,0.640672166455702,0,0,0,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0.67824236924195,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.829288440122964,0.756962552626885,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,4.115740113314,1.47008711385542,0,22.6050259835854,5.90789906681404,0,0.737930631258681,0,0.109750285408626,0,0,0.0925884451585296,1.95484983186195,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.888970520090367,2.29193055334967,3.51652341630141,3.4214489204541,0.411309970813294,3.60411669412701,2.28661146104463,0.112131084345361,0.43596006883328,0,0.775630294546667,7.15312891703765,0,0,1.04007436911366,2.31486636835928,2.83698264046557,0.799266537048298,1.14382394926518,34.1851611396609,11.5253647149308,0.325736184293735,1.06617584622764,7.91951872933429,0.602878754119172,0,0.299918973546171,0,0,0,0,0,1.42636905040718,3.32997005335432,3.6985738059069,5.55088986043676,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,2.00068208423871,0.271265023699736,0,0,0,0,0,0,0,0,0,0,10.573262502988,1.02943027143257,0,0,0,4.54691357169389,18.3078983461547,10.8860505598685,0.496215615637554,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0.114814448164607,0,0,1.35359883872224,0.0770153371044148,1.56869953835371,1.46139224653261,0.105551628892876,0,0,1.94324324491925,0,4.33514300070165,4.01351819083883,0.509752546090077,0,2.0148727924996,0,0,3.07740150139667,4.92021968549559,5.20605431462885,0.721287081534056,0,0,0,0,0,0.48335359146061,0.462145851343933,0.460511024178389,0.827019434907183,0.107420244868274,1.0151168573996,0.0852266274161009,1.15741646340759,0.330569830721956,0.192190067365106,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0,0,0.744316738719335,1.58189712359363,6.29079639948622,7.16513815671735,2.99557291623744,0,0,2.15846949099978,1.37268514868027,0.824686816419805,0,0,0,2.43816869544795,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,2.86822704408103,10.512647388404,0,0,0,0,0.75894634753143,6.29882496440969,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,6.72991648103081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,1.68900326502395,0.19924798825107,0,0,0.818149460017238,0,0,0,0,0,0.591860433821602,0,1.11136990144637,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,1.38510465306835,0.455768223388005,0,0.179515288819544,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,1.06149077404007,0,0,0,0,1.01101699471016,0,0.234264445725339,0,0,0,0.789168805698781,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0.195984794828755,0,0.34945333648406,0.171986032471617,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0.316553979779393,0,0,0,0,0,0,0.514784993585894,0,0.124252535565433,0,2.44627570932505,2.61507115780833,0.101998217636322,0,0,0.821432273351958,0,0,0,2.23425921017803,0.458320848023367,0.717873024576814,1.19807400299395,1.71690419254628,1.33902874465124,0.604651252380536,0,0,0.0787831823072236,0,0.13480708770837,0.196854963029498,0,0,0.408610218334727,0,0,0.415440338029185,0,0,0.242998226632099,0,2.83700546277113,0.83927341015997,0,0,0,0,1.32418394073086,2.034148301238,0,1.72844298240254,0,0,0,0.170388021785422,0.113312091520126,4.25001477666439,7.95041333473328,0.904980694530854,0.52893040697076,0,0,0.640724475406168,1.10043013569766,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.443716206147409,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0.300515217994437,1.52322084867518,0,0,0.107410557042488,0,0,12.0008329398946,0,0,0,0.57785949122191,4.93215660162329,0.521988583930423,1.58694147858591,0,0,0,2.16161013012681,0,0.353378291891762,1.54331230616732,0.168942440653073,0.256241518587947,1.72715170865599,0.3038599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| |||
|short_description=p2@IP6K3 | |||
}} |
Revision as of 11:28, 22 January 2014
Short description: | p2@IP6K3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IP6K3_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000451316, NM_001142883, NM_054111, uc003ofb.2, uc010jvf.2_5end |
EntrezGene: | IP6K3 |
HGNC: | 17269 |
UniProt: | Q96PC2A8K1M0Q5TAQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visual pigment cell | 7.78e-09 | 4 |
skeletal muscle myoblast | 2.10e-08 | 4 |
pericyte cell | 2.40e-08 | 4 |
pigment cell | 4.11e-08 | 14 |
placental epithelial cell | 1.80e-07 | 3 |
extraembryonic cell | 2.84e-07 | 19 |
retinal pigment epithelial cell | 4.67e-07 | 3 |
epithelial cell of nephron | 8.29e-07 | 15 |
light melanocyte | 9.65e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 5.09e-16 | 160 |
entire embryonic mesenchyme | 5.09e-16 | 160 |
abdomen element | 1.62e-12 | 54 |
abdominal segment element | 1.62e-12 | 54 |
trunk mesenchyme | 5.17e-11 | 122 |
abdominal segment of trunk | 1.23e-10 | 60 |
abdomen | 1.23e-10 | 60 |
trunk | 1.04e-08 | 199 |
epithelial vesicle | 1.82e-08 | 78 |
layer of retina | 1.98e-08 | 4 |
liver | 3.37e-08 | 19 |
digestive gland | 3.37e-08 | 19 |
liver bud | 3.37e-08 | 19 |
retina | 6.13e-08 | 6 |
photoreceptor array | 6.13e-08 | 6 |
posterior segment of eyeball | 6.13e-08 | 6 |
stroma | 6.24e-08 | 4 |
trunk region element | 6.33e-08 | 101 |
pigmented layer of retina | 4.67e-07 | 3 |
presumptive retinal pigmented epithelium | 4.67e-07 | 3 |
nephron epithelium | 8.29e-07 | 15 |
renal tubule | 8.29e-07 | 15 |
nephron tubule | 8.29e-07 | 15 |
nephron | 8.29e-07 | 15 |
uriniferous tubule | 8.29e-07 | 15 |
nephrogenic mesenchyme | 8.29e-07 | 15 |
hepatic diverticulum | 8.76e-07 | 22 |
liver primordium | 8.76e-07 | 22 |